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MH884508.1__AYP68170.1__vBBcoS136_00038__00038
Bact-VirMH884508.1__AYP68170.1__vBBcoS136_00038__00038
Identity
- Accession:
- MH884508 ↗
- Kingdom:
- phage
Quality
71.5
mean pLDDT
Taxonomy
TaxID: 2419619
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-68
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mwyA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.73 | 59.0 | 5.31e-01 | 90.4% | 91.8% |
| 2ofhX00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 57.0 | 5.22e-01 | 90.4% | 97.2% |
| 2o34A00 | 3.10.520.10 | Alpha Beta › Roll › T-fold › ApbE-like domains | 0.71 | 60.0 | 3.92e-01 | 100.0% | 41.0% |
| 2aj0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 55.0 | 5.09e-01 | 90.4% | 87.3% |
| 1e94A00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.69 | 58.0 | 4.11e-01 | 100.0% | 96.6% |
| 1icrA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.65 | 48.0 | 3.21e-01 | 80.8% | 69.4% |
| 1u7lA03 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 51.0 | 4.34e-01 | 98.1% | 91.1% |
| 3lxuX01 | 3.40.50.200 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain | 0.58 | 43.0 | 2.74e-01 | 86.5% | 86.8% |
| 2bl0B01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.58 | 41.0 | 3.81e-01 | 76.9% | 97.1% |
| 2f06A00 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.57 | 45.0 | 3.43e-01 | 88.5% | 46.5% |
| 1jqgA01 | 3.30.70.340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like | 0.55 | 41.0 | 3.60e-01 | 88.5% | 69.2% |
| 1xffA00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.55 | 44.0 | 3.01e-01 | 100.0% | 35.3% |
| 3dddA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 44.0 | 3.42e-01 | 96.2% | 50.0% |
| 3m9zA00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.54 | 38.0 | 2.91e-01 | 75.0% | 42.7% |
| 2xguB00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.53 | 41.0 | 3.22e-01 | 92.3% | 81.3% |
| 3btxA00 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.53 | 41.0 | 2.81e-01 | 82.7% | 76.5% |
| 3nm6B00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.53 | 41.0 | 2.80e-01 | 92.3% | 97.8% |
| 2hq4A00 | 3.40.1600.10 | Alpha Beta › 3-Layer(aba) Sandwich › PH1570-like fold › PH1570-like | 0.53 | 41.0 | 3.04e-01 | 90.4% | 86.7% |
| 2zoeA00 | 2.170.15.20 | Mainly Beta › Beta Complex › Proaerolysin; Chain A, domain 3 › | 0.52 | 40.0 | 2.94e-01 | 90.4% | 62.5% |
| 2rsxA00 | 3.10.450.420 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 40.0 | 2.82e-01 | 82.7% | 63.5% |
| 1o97D01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 43.0 | 3.03e-01 | 100.0% | 47.6% |
| 1q1rA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.51 | 40.0 | 3.35e-01 | 86.5% | 54.7% |
| 2oh1C00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 35.0 | 2.46e-01 | 73.1% | 25.0% |
| 1ffvC03 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.50 | 41.0 | 3.34e-01 | 100.0% | 89.5% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3807180 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.75 | 61.0 | 5.42e-01 | 90.4% | 86.7% |
| 3290829 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.72 | 59.0 | 5.43e-01 | 88.5% | 90.8% |
| 5050340 | 230.4.1.2 ↗ | a+b two layers › T-fold › ApbE-like › ApbE-like › AbpE_bact | 0.71 | 60.0 | 4.67e-01 | 100.0% | 93.3% |
| 5071626 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.68 | 53.0 | 3.56e-01 | 90.4% | 64.5% |
| 4562079 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.65 | 46.0 | 3.61e-01 | 86.5% | 33.3% |
| 4930389 | 230.4.1.2 ↗ | a+b two layers › T-fold › ApbE-like › ApbE-like › AbpE_bact | 0.65 | 54.0 | 4.32e-01 | 100.0% | 90.4% |
| 3890613 | 101.1.2.698 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27079 | 0.64 | 45.0 | 4.30e-01 | 78.8% | 64.6% |
| 4936297 | 304.48.1.32 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › TiaS-FLD | 0.63 | 48.0 | 3.46e-01 | 90.4% | 59.4% |
| 4954308 | 210.1.1.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › DUF2121 | 0.62 | 49.0 | 3.37e-01 | 94.2% | 29.3% |
| 5047677 | 230.4.1.2 ↗ | a+b two layers › T-fold › ApbE-like › ApbE-like › AbpE_bact | 0.62 | 51.0 | 4.12e-01 | 100.0% | 89.6% |
| 4672450 | 210.1.1.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › DUF2121 | 0.61 | 47.0 | 3.31e-01 | 94.2% | 30.7% |
| 4983272 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.60 | 38.0 | 2.36e-01 | 71.2% | 11.4% |
| 5023993 | 210.1.1.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › DUF2121 | 0.60 | 46.0 | 3.16e-01 | 92.3% | 29.1% |
| 5017610 | 210.1.1.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › DUF2121 | 0.59 | 46.0 | 3.32e-01 | 100.0% | 84.4% |
| 5082912 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.56 | 44.0 | 3.38e-01 | 90.4% | 64.6% |
| 4944866 | 2003.1.1.393 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › PF30885 | 0.56 | 43.0 | 2.97e-01 | 90.4% | 97.2% |
| 4982179 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.56 | 44.0 | 3.56e-01 | 90.4% | 76.2% |
| 4135607 | 1.1.3.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ | 0.55 | 47.0 | 3.37e-01 | 100.0% | 34.0% |
| 3224210 | 213.1.1.49 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF1248 | 0.55 | 39.0 | 2.88e-01 | 78.8% | 49.0% |
| 4973393 | 3933.1.1.1 ↗ | a+b two layers › Uncharacterized protein YPO2434 › Uncharacterized protein YPO2434 › Uncharacterized protein YPO2434 › KTSC | 0.54 | 43.0 | 4.02e-01 | 100.0% | 72.0% |
| 5062512 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.54 | 42.0 | 3.47e-01 | 90.4% | 80.0% |
| 3604150 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.51 | 42.0 | 2.80e-01 | 100.0% | 35.8% |
| 4207793 | 3054.1.1.0 ↗ | alpha arrays › Insert all-alpha domain in prim-pol › Insert all-alpha domain in prim-pol › Insert all-alpha domain in prim-pol | 0.51 | 42.0 | 3.68e-01 | 92.3% | 63.7% |
| 5073591 | 298.2.1.1 ↗ | a+b two layers › FwdE/GAPDH domain-like › FwdE-like › FwdE-like › FmdE | 0.51 | 38.0 | 3.08e-01 | 92.3% | 66.9% |