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MH884508.1__AYP68206.1__vBBcoS136_00074__00074
Bact-VirMH884508.1__AYP68206.1__vBBcoS136_00074__00074
Identity
- Accession:
- MH884508 ↗
- Kingdom:
- phage
Quality
70.5
mean pLDDT
Taxonomy
TaxID: 2419619
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-65
Domain cluster:
representative
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2mc2A00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.72 | 62.0 | 4.36e-01 | 100.0% | 97.1% |
| 1jqpA01 | 2.40.128.80 | Mainly Beta › Beta Barrel › Lipocalin › Cathepsin C, exclusion domain | 0.70 | 57.0 | 4.82e-01 | 96.7% | 92.9% |
| 2vobB02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.68 | 60.0 | 4.14e-01 | 100.0% | 35.0% |
| 2jn4A00 | 2.40.50.240 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NifT/FixU-like | 0.68 | 51.0 | 5.04e-01 | 82.0% | 83.3% |
| 3a2yA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.68 | 60.0 | 4.25e-01 | 100.0% | 40.5% |
| 4ry2A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.67 | 52.0 | 3.94e-01 | 100.0% | 36.2% |
| 5dvhA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.66 | 56.0 | 4.07e-01 | 100.0% | 90.3% |
| 3zx7A02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.65 | 55.0 | 4.37e-01 | 100.0% | 96.4% |
| 1cv8A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.65 | 55.0 | 4.07e-01 | 100.0% | 39.9% |
| 6bogA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 46.0 | 4.93e-01 | 98.4% | 90.4% |
| 2in5A00 | 2.40.360.10 | Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like | 0.64 | 54.0 | 3.91e-01 | 100.0% | 83.1% |
| 1jsgA00 | 2.40.15.10 | Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 | 0.64 | 50.0 | 4.19e-01 | 88.5% | 95.5% |
| 7afrX02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.64 | 49.0 | 4.96e-01 | 100.0% | 85.0% |
| 1a1xA00 | 2.40.15.10 | Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 | 0.64 | 47.0 | 4.07e-01 | 83.6% | 94.3% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 47.0 | 4.64e-01 | 100.0% | 75.0% |
| 3ebwA01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.63 | 53.0 | 4.14e-01 | 96.7% | 71.8% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.63 | 43.0 | 3.75e-01 | 100.0% | 47.8% |
| 3p02A02 | 2.40.128.440 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 | 0.62 | 52.0 | 3.97e-01 | 100.0% | 83.9% |
| 3nqkA02 | 2.40.128.440 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 | 0.62 | 52.0 | 3.98e-01 | 100.0% | 85.0% |
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 49.0 | 5.05e-01 | 100.0% | 91.2% |
| 2qmiA02 | 2.40.128.210 | Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain | 0.61 | 51.0 | 4.39e-01 | 95.1% | 84.0% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.61 | 50.0 | 4.93e-01 | 100.0% | 83.6% |
| 3goxA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 45.0 | 4.79e-01 | 98.4% | 96.1% |
| 3facA00 | 2.170.150.70 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › | 0.60 | 47.0 | 3.93e-01 | 86.9% | 80.7% |
| 3npfA02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 45.0 | 4.36e-01 | 100.0% | 74.3% |
| 5i92F01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.59 | 49.0 | 3.55e-01 | 93.4% | 73.3% |
| 3l44A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.59 | 49.0 | 3.52e-01 | 93.4% | 70.5% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 49.0 | 5.06e-01 | 100.0% | 96.6% |
| 1ex4B02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.58 | 41.0 | 4.14e-01 | 100.0% | 79.7% |
| 1c8zA00 | 3.20.90.10 | Alpha Beta › Alpha-Beta Barrel › Tubby Protein; Chain A › Tubby Protein; Chain A | 0.58 | 44.0 | 3.05e-01 | 90.2% | 93.2% |
| 5g4iB01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.56 | 47.0 | 3.44e-01 | 91.8% | 75.6% |
| 2cy8A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 45.0 | 3.20e-01 | 90.2% | 65.4% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 46.0 | 4.59e-01 | 100.0% | 90.6% |
| 1wb1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 44.0 | 3.89e-01 | 98.4% | 59.8% |
| 7ctpA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 46.0 | 3.79e-01 | 100.0% | 84.2% |
| 1vefA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 46.0 | 3.43e-01 | 93.4% | 75.2% |
| 2w4yA00 | 2.40.160.220 | Mainly Beta › Beta Barrel › Porin › | 0.53 | 41.0 | 3.47e-01 | 91.8% | 66.4% |
| 2rqrA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 46.0 | 3.71e-01 | 100.0% | 50.4% |
| 4wfvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 42.0 | 3.37e-01 | 100.0% | 94.1% |
| 1fc4A02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 37.0 | 3.01e-01 | 78.7% | 69.1% |
| 4o4oA00 | 2.40.128.590 | Mainly Beta › Beta Barrel › Lipocalin › CpcT/CpeT domain | 0.51 | 41.0 | 3.07e-01 | 100.0% | 91.9% |
| 4hjhA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.50 | 43.0 | 3.64e-01 | 95.1% | 69.3% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5013892 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 54.0 | 5.70e-01 | 100.0% | 87.3% |
| 3486885 | 9.8.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Dipeptidyl peptidase I (cathepsin C), exclusion domain › Dipeptidyl peptidase I (cathepsin C), exclusion domain › CathepsinC_exc | 0.71 | 60.0 | 5.07e-01 | 98.4% | 89.1% |
| 3745132 | 9.8.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Dipeptidyl peptidase I (cathepsin C), exclusion domain › Dipeptidyl peptidase I (cathepsin C), exclusion domain › CathepsinC_exc | 0.70 | 59.0 | 4.73e-01 | 100.0% | 81.5% |
| 4319097 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 47.0 | 4.85e-01 | 96.7% | 79.3% |
| 3470263 | 9.8.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Dipeptidyl peptidase I (cathepsin C), exclusion domain › Dipeptidyl peptidase I (cathepsin C), exclusion domain | 0.66 | 55.0 | 4.69e-01 | 100.0% | 87.3% |
| 3517651 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 53.0 | 4.99e-01 | 100.0% | 74.7% |
| 3606829 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.63 | 56.0 | 3.90e-01 | 100.0% | 34.6% |
| 169663 | 9.1.1.11 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2 | 0.63 | 54.0 | 4.05e-01 | 96.7% | 65.0% |
| 2575643 | 4.1.1.8 ↗ | beta barrels › SH3 › SH3 › SH3 › IN_DBD_C | 0.62 | 46.0 | 4.42e-01 | 100.0% | 69.6% |
| 1905738 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.61 | 54.0 | 4.04e-01 | 100.0% | 39.9% |
| 2792228 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.61 | 53.0 | 3.95e-01 | 100.0% | 68.5% |
| 3927363 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 42.0 | 4.56e-01 | 96.7% | 90.0% |
| 3978775 | 4200.1.1.1 ↗ | beta barrels › YmcC-like › YmcC-like › YmcC-like › YjbF | 0.61 | 52.0 | 3.73e-01 | 100.0% | 82.4% |
| 3207530 | 314.1.1.22 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › zf-TFIIIC | 0.61 | 40.0 | 4.15e-01 | 88.5% | 74.5% |
| 3783400 | 6.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil | 0.61 | 49.0 | 3.95e-01 | 95.1% | 97.8% |
| 3802536 | 9.23.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 › PAP_fibrillin | 0.60 | 52.0 | 3.89e-01 | 100.0% | 63.0% |
| 3883159 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.60 | 45.0 | 3.99e-01 | 100.0% | 54.4% |
| 3178051 | 6.1.1.40 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › PF29113 | 0.60 | 50.0 | 4.13e-01 | 100.0% | 92.8% |
| 3927795 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 48.0 | 4.89e-01 | 100.0% | 91.7% |
| 540 | 4.1.1.8 ↗ | beta barrels › SH3 › SH3 › SH3 › IN_DBD_C | 0.60 | 44.0 | 4.81e-01 | 100.0% | 100.0% |
| 3881123 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.60 | 43.0 | 3.94e-01 | 100.0% | 56.5% |
| 3181514 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.60 | 46.0 | 3.68e-01 | 86.9% | 70.0% |
| 3938389 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.59 | 48.0 | 4.29e-01 | 100.0% | 63.5% |
| 3831652 | 71.1.1.17 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF28435 | 0.59 | 50.0 | 3.80e-01 | 100.0% | 83.5% |
| 3979951 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.58 | 43.0 | 3.53e-01 | 80.3% | 61.7% |
| 3999725 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 42.0 | 3.81e-01 | 100.0% | 58.8% |
| 3969530 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.55 | 38.0 | 3.18e-01 | 73.8% | 65.2% |
| 3925589 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 48.0 | 4.60e-01 | 100.0% | 91.4% |
| 3765126 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.55 | 44.0 | 4.66e-01 | 96.7% | 100.0% |
| 4674170 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.54 | 46.0 | 3.77e-01 | 100.0% | 52.5% |
| 4210618 | 3735.1.1.12 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › RHS_repeat, DUF6531, TEN_YD-shell | 0.54 | 44.0 | 2.72e-01 | 98.4% | 13.2% |
| 4119187 | 3735.1.1.12 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › RHS_repeat, DUF6531, TEN_YD-shell | 0.54 | 42.0 | 2.35e-01 | 96.7% | 5.7% |
| 4433757 | 3347.1.1.3 ↗ | beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › RHS_repeat, DUF6531 | 0.54 | 44.0 | 2.71e-01 | 98.4% | 13.2% |
| 4491893 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.53 | 47.0 | 3.96e-01 | 100.0% | 92.2% |
| 3747656 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.53 | 46.0 | 3.51e-01 | 100.0% | 55.3% |
| 4441857 | 3347.1.1.6 ↗ | beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › RHS_repeat, DUF6531, TEN_YD-shell | 0.52 | 42.0 | 2.67e-01 | 96.7% | 15.4% |
| 5018904 | 71.1.1.8 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like | 0.52 | 44.0 | 3.20e-01 | 100.0% | 76.9% |
| 3979006 | 77.1.1.15 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › RHS_repeat, DUF6531, TEN_YD-shell | 0.50 | 42.0 | 2.52e-01 | 95.1% | 38.1% |
| 4632179 | 506.2.1.1 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UB2H | 0.50 | 41.0 | 3.67e-01 | 96.7% | 91.6% |
| 3220820 | 11.1.1.835 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_Irg-7 | 0.50 | 39.0 | 3.27e-01 | 88.5% | 59.1% |