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MH884508.1__AYP68213.1__vBBcoS136_00081__00081

Bact-Vir

MH884508.1__AYP68213.1__vBBcoS136_00081__00081

Identity

Accession:
MH884508 ↗
Kingdom:
phage

Quality

97.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-74
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF11195.15 best Tad2-like 33.6 6.50e-08 92.8% 98.6%
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7b9cA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 45.0 2.83e-01 79.7% 32.4%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 46.0 4.24e-01 82.6% 73.6%
2ec1A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 42.0 3.57e-01 76.8% 82.2%
3k8uA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.58 50.0 4.14e-01 100.0% 61.8%
4jpqA00 2.60.40.1190 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 49.0 3.53e-01 100.0% 96.3%
1yarH00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.57 45.0 3.30e-01 88.4% 83.7%
1rypC00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.56 46.0 3.22e-01 92.8% 74.2%
2k0mA00 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 43.0 3.91e-01 88.4% 84.6%
1a7tA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.56 40.0 2.88e-01 78.3% 91.6%
6e20A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 47.0 3.93e-01 100.0% 88.6%
2p18A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.55 37.0 2.55e-01 71.0% 22.6%
5fmgG00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.55 44.0 3.15e-01 88.4% 74.4%
2l5qA01 2.30.30.730 Mainly Beta › Roll › SH3 type barrels. › 0.55 37.0 4.15e-01 98.6% 98.0%
8adnN01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.55 43.0 3.22e-01 87.0% 88.5%
1rypA00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.55 44.0 3.12e-01 91.3% 77.0%
6muwM00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.55 43.0 3.17e-01 89.9% 85.0%
6qm7M00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.55 43.0 3.19e-01 91.3% 87.9%
2ecfA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.55 46.0 2.80e-01 92.8% 49.5%
5fmgA00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.55 43.0 3.14e-01 89.9% 75.8%
3unbF00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.55 44.0 3.10e-01 91.3% 73.4%
4fdtB00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.55 42.0 2.73e-01 89.9% 91.7%
1rypL00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.54 44.0 3.23e-01 92.8% 83.0%
1ryp200 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.54 44.0 3.15e-01 92.8% 81.1%
3e5zA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.54 46.0 3.08e-01 95.7% 89.0%
6muwH00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.54 44.0 3.30e-01 92.8% 88.3%
6muwJ00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.54 42.0 3.16e-01 91.3% 87.8%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 38.0 3.55e-01 75.4% 87.4%
3s27B01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 42.0 3.50e-01 91.3% 66.2%
3tc2B00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.53 40.0 3.07e-01 85.5% 66.1%
2rkcA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.52 38.0 2.46e-01 81.2% 47.6%
4agiA00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.52 39.0 2.63e-01 84.1% 89.8%
1nunA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 40.0 3.34e-01 91.3% 100.0%
6muwK00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.51 41.0 3.12e-01 92.8% 91.8%
2p4oA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.51 46.0 2.98e-01 98.6% 91.8%
1ei5A02 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.51 38.0 3.64e-01 82.6% 92.7%
2azpA02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.51 40.0 3.11e-01 87.0% 93.0%
1y7bA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 42.0 2.84e-01 100.0% 88.9%
1bwzA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.50 41.0 3.49e-01 97.1% 100.0%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3588096 4.1.1.189 beta barrels › SH3 › SH3 › SH3 › DUF2829 0.89 78.0 7.63e-01 92.8% 98.6%
5028909 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.68 54.0 3.23e-01 87.0% 61.0%
5066039 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.66 52.0 3.14e-01 87.0% 61.8%
3726251 6109.1.1.1 a+b two layers › N-terminal domain of chitin biosynthesis protein CHS6 › N-terminal domain of chitin biosynthesis protein CHS6 › N-terminal domain of chitin biosynthesis protein CHS6 › ChAPs 0.62 54.0 4.09e-01 98.6% 64.7%
3659855 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 43.0 4.18e-01 73.9% 98.8%
3412142 252.1.1.1 a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD 0.61 47.0 4.00e-01 85.5% 78.3%
5003053 3504.3.1.1 beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.61 42.0 3.32e-01 76.8% 32.9%
396031 4.22.1.1 beta barrels › SH3 › Hypothetical protein ORF131 › Hypothetical protein ORF131 › PSV_ORF131-like_dom 0.60 45.0 4.05e-01 82.6% 66.3%
3782542 6109.1.1.1 a+b two layers › N-terminal domain of chitin biosynthesis protein CHS6 › N-terminal domain of chitin biosynthesis protein CHS6 › N-terminal domain of chitin biosynthesis protein CHS6 › ChAPs 0.60 51.0 3.79e-01 98.6% 64.7%
4004760 64.1.1.5 beta meanders › WW domain-like › WW domain › WW domain › DUF333 0.59 36.0 4.14e-01 72.5% 91.1%
3346946 3556.1.1.1 a+b two layers › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › DUF3223 0.59 45.0 3.95e-01 85.5% 77.0%
3432156 386.1.1.117 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7028 0.59 37.0 4.13e-01 76.8% 80.0%
4956661 3504.3.1.1 beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.59 41.0 3.31e-01 76.8% 35.2%
5039311 3504.3.1.1 beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.59 42.0 3.38e-01 78.3% 36.7%
4941310 3504.3.1.1 beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.59 41.0 3.21e-01 76.8% 32.9%
4964966 3504.3.1.1 beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.58 42.0 3.38e-01 79.7% 76.8%
3425722 386.1.1.117 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7028 0.58 37.0 3.52e-01 76.8% 51.8%
5024498 3504.3.1.1 beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.58 41.0 3.36e-01 76.8% 38.5%
224808 11.1.1.194 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM9_2 0.57 49.0 3.53e-01 100.0% 96.3%
5000741 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.57 45.0 4.64e-01 91.3% 92.3%
5016167 3504.3.1.1 beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.57 41.0 3.21e-01 79.7% 71.2%
3315951 220.1.1.86 beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.56 41.0 3.96e-01 78.3% 98.7%
3949006 5.1.2.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 0.56 43.0 2.88e-01 84.1% 75.7%
3231481 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.56 48.0 3.50e-01 100.0% 60.5%
184706 3556.1.1.1 a+b two layers › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › DUF3223 0.56 43.0 3.91e-01 88.4% 84.6%
146634 4.1.1.119 beta barrels › SH3 › SH3 › SH3 › DUF5606 0.56 38.0 4.22e-01 97.1% 100.0%
3403944 210.1.1.2 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome,Proteasome_A_N 0.56 45.0 3.17e-01 92.8% 73.6%
3261503 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.55 45.0 3.24e-01 92.8% 80.9%
4024384 210.1.1.2 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome,Proteasome_A_N 0.55 45.0 3.09e-01 89.9% 73.2%
968966 210.1.1.2 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome,Proteasome_A_N 0.55 44.0 3.18e-01 91.3% 83.1%
5016556 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 43.0 4.02e-01 88.4% 93.3%
3788312 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.54 40.0 2.36e-01 79.7% 18.0%
4641087 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.54 39.0 3.49e-01 75.4% 60.0%
None 0.54 43.0 2.40e-01 92.8% 52.8%
4845615 5.1.3.128 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › TEN_NHL 0.54 45.0 2.90e-01 92.8% 84.7%
4023682 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.54 44.0 3.27e-01 94.2% 87.8%
3599053 210.1.1.0 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits 0.54 44.0 3.21e-01 95.7% 81.4%
3934966 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.53 45.0 3.22e-01 98.6% 76.8%
3400905 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.53 43.0 3.15e-01 92.8% 82.8%
1097232 3180.1.1.1 a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › EspG 0.53 36.0 3.18e-01 71.0% 50.5%
3594372 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.53 45.0 2.71e-01 100.0% 28.1%
3577687 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.52 44.0 3.30e-01 100.0% 56.9%
3874808 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.52 43.0 3.13e-01 98.6% 75.2%
4935086 3504.3.1.1 beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.52 41.0 3.26e-01 89.9% 80.0%
4104221 5.1.7.5 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › BNR, Sortilin-Vps10 0.52 43.0 2.61e-01 94.2% 20.4%
3708226 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.52 43.0 3.10e-01 98.6% 74.6%
5024242 3504.3.1.1 beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.52 40.0 3.23e-01 89.9% 67.7%
5025364 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.52 40.0 3.99e-01 89.9% 86.7%
4995784 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 40.0 3.99e-01 89.9% 81.3%
4951148 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 42.0 2.70e-01 91.3% 73.6%
3601739 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.51 41.0 2.84e-01 94.2% 65.4%
3775592 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 43.0 2.34e-01 97.1% 39.7%
2184 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.51 46.0 2.96e-01 98.6% 88.7%
3764432 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 38.0 3.91e-01 82.6% 86.2%
3546607 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.51 34.0 3.85e-01 97.1% 98.0%
4579655 5.1.4.38 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.51 43.0 2.69e-01 97.1% 87.4%
3958009 66.1.1.0 beta sandwiches › ISP domain › ISP domain › ISP domain 0.50 38.0 3.10e-01 87.0% 88.0%