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MH884509.1__AYP68381.1__BboS125_00011__00011
Bact-VirMH884509.1__AYP68381.1__BboS125_00011__00011
Identity
- Accession:
- MH884509 ↗
- Kingdom:
- phage
Quality
84.4
mean pLDDT
Taxonomy
TaxID: 2419618
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-157
Domain cluster:
rep: NC_041875.1__YP_009594310.1__FDG92_gp21__00021__D5-180
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01510.31 best | Amidase_2 | 64.9 | 1.30e-17 | 83.7% | 98.5% |
D2
high
residues 179-270
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01476.27 best | LysM | 68.0 | 7.60e-19 | 47.8% | 97.7% |
| PF01476.27 | LysM | 63.6 | 1.80e-17 | 47.8% | 100.0% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4b8vA01 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.91 | 51.0 | 5.96e-01 | 100.0% | 77.6% |
| 2mkxA00 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.80 | 43.0 | 5.52e-01 | 71.7% | 94.1% |
| 4b8vA02 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.79 | 50.0 | 5.65e-01 | 96.7% | 82.2% |
| 2djpA00 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.71 | 46.0 | 5.03e-01 | 87.0% | 79.2% |
| 3sluB01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 36.0 | 3.70e-01 | 73.9% | 62.6% |
| 4mgrA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.55 | 37.0 | 2.48e-01 | 71.7% | 16.7% |
| 6d0aA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 34.0 | 3.21e-01 | 71.7% | 51.3% |
| 5hzlB01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.51 | 41.0 | 3.38e-01 | 92.4% | 74.7% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3974521 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.97 | 49.0 | 6.24e-01 | 71.7% | 80.0% |
| 3501971 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.95 | 52.0 | 6.60e-01 | 90.2% | 86.7% |
| 4249176 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.92 | 51.0 | 6.35e-01 | 71.7% | 85.0% |
| 3426433 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.92 | 53.0 | 6.65e-01 | 100.0% | 90.0% |
| 3452845 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.92 | 52.0 | 6.82e-01 | 100.0% | 96.4% |
| 4461167 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.92 | 49.0 | 5.92e-01 | 72.8% | 76.9% |
| 2047861 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.92 | 53.0 | 6.73e-01 | 100.0% | 93.1% |
| 3458171 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.91 | 53.0 | 6.32e-01 | 100.0% | 83.1% |
| 3903953 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.91 | 46.0 | 6.34e-01 | 71.7% | 94.0% |
| 2124476 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.91 | 51.0 | 4.36e-01 | 100.0% | 38.5% |
| 3981327 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.91 | 49.0 | 6.43e-01 | 100.0% | 92.6% |
| 3349612 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.90 | 47.0 | 6.39e-01 | 100.0% | 96.0% |
| 3165071 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.89 | 48.0 | 6.26e-01 | 100.0% | 90.9% |
| 4277578 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.89 | 46.0 | 6.32e-01 | 97.8% | 96.0% |
| 3464064 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.89 | 52.0 | 5.48e-01 | 71.7% | 64.7% |
| 3969916 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.89 | 55.0 | 6.31e-01 | 96.7% | 82.9% |
| 3636417 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.88 | 48.0 | 6.29e-01 | 98.9% | 94.3% |
| 4137479 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.87 | 47.0 | 4.93e-01 | 72.8% | 58.8% |
| 4448562 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.87 | 51.0 | 6.67e-01 | 93.5% | 100.0% |
| 3324708 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.87 | 50.0 | 6.25e-01 | 100.0% | 90.0% |
| 3165082 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.87 | 47.0 | 6.34e-01 | 81.5% | 100.0% |
| 4390103 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.85 | 48.0 | 5.92e-01 | 71.7% | 86.7% |
| 3982977 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.85 | 49.0 | 6.04e-01 | 100.0% | 90.0% |
| 3641672 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.84 | 49.0 | 5.40e-01 | 70.7% | 72.0% |
| 3985839 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 52.0 | 6.02e-01 | 83.7% | 84.3% |
| 3691772 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 46.0 | 5.86e-01 | 75.0% | 92.7% |
| 4491522 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 48.0 | 5.93e-01 | 77.2% | 90.0% |
| 3303205 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.82 | 50.0 | 6.09e-01 | 71.7% | 93.3% |
| 3821115 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.82 | 49.0 | 5.16e-01 | 70.7% | 65.9% |
| 3331840 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.82 | 45.0 | 5.82e-01 | 71.7% | 92.7% |
| 3338947 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.82 | 49.0 | 5.79e-01 | 96.7% | 86.2% |
| 3662672 | 101.15.1.8 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_NFP | 0.80 | 49.0 | 5.60e-01 | 70.7% | 81.4% |
| 3691758 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.80 | 46.0 | 5.91e-01 | 80.4% | 96.4% |
| 3413357 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.80 | 49.0 | 5.56e-01 | 73.9% | 81.4% |
| 3970704 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.79 | 52.0 | 6.07e-01 | 85.9% | 93.8% |
| 3306283 | 101.15.1.8 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_NFP | 0.79 | 47.0 | 5.45e-01 | 70.7% | 83.1% |
| 1178373 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.79 | 47.0 | 5.55e-01 | 88.0% | 87.3% |
| 3946658 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.78 | 53.0 | 5.99e-01 | 88.0% | 91.4% |
| 3217972 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.77 | 47.0 | 5.71e-01 | 90.2% | 95.0% |
| 3217973 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.74 | 44.0 | 5.04e-01 | 100.0% | 78.6% |
| 1097264 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.73 | 52.0 | 5.82e-01 | 83.7% | 94.4% |
| 3365578 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.72 | 50.0 | 5.40e-01 | 100.0% | 82.5% |
| 2644066 | 101.15.1.7 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM_RLK | 0.72 | 44.0 | 4.87e-01 | 71.7% | 75.0% |
| 162111 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.71 | 46.0 | 5.03e-01 | 87.0% | 79.2% |
| 3666767 | 101.15.1.10 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP | 0.71 | 51.0 | 4.90e-01 | 84.8% | 65.7% |
| 3381619 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.69 | 54.0 | 3.73e-01 | 82.6% | 60.1% |
| 3337328 | 101.15.1.14 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM, LysM2_CERK1_LYK3_4_5 | 0.67 | 54.0 | 3.74e-01 | 84.8% | 57.4% |
| 3417561 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.67 | 53.0 | 3.55e-01 | 81.5% | 50.2% |
| 3670445 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.66 | 57.0 | 3.82e-01 | 90.2% | 39.0% |
| 2124918 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.62 | 58.0 | 5.00e-01 | 100.0% | 96.3% |
| 4379136 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.61 | 47.0 | 4.30e-01 | 79.3% | 76.5% |
| 2124917 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.60 | 54.0 | 4.41e-01 | 95.7% | 78.9% |
| 3655335 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.60 | 53.0 | 4.32e-01 | 95.7% | 78.8% |
| 3810505 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.59 | 53.0 | 4.29e-01 | 95.7% | 78.2% |
| 2035755 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.58 | 50.0 | 4.92e-01 | 90.2% | 93.9% |
D3
high
residues 300-363
Domain cluster:
rep: MW388005.1__QQO39020.1__X__00046__D8-66
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01471.24 best | PG_binding_1 | 50.2 | 3.20e-13 | 93.8% | 98.2% |