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MH884509.1__AYP68392.1__BboS125_00022__00022
Bact-VirMH884509.1__AYP68392.1__BboS125_00022__00022
Identity
- Accession:
- MH884509 ↗
- Kingdom:
- phage
Quality
65.7
mean pLDDT
Taxonomy
TaxID: 2419618
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 7-58
D2
medium
residues 68-107
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1d2mA03 | 6.10.140.240 | Special › Helix non-globular › Helix Hairpins › | 0.86 | 63.0 | 5.23e-01 | 77.5% | 47.0% |
| 2mpcA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.86 | 60.0 | 4.58e-01 | 75.0% | 33.3% |
| 6fbtA01 | 1.10.1240.20 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain | 0.72 | 53.0 | 4.40e-01 | 82.5% | 46.1% |
| 2pmrA00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.70 | 58.0 | 4.83e-01 | 100.0% | 81.6% |
| 4hhxA00 | 1.20.81.30 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › Type II secretion system (T2SS), domain F | 0.67 | 52.0 | 4.10e-01 | 100.0% | 44.2% |
| 2ms7A00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.60 | 47.0 | 3.74e-01 | 100.0% | 45.1% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3651090 | 2002.1.1.95 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pantoate_transf | 0.91 | 65.0 | 3.76e-01 | 75.0% | 9.8% |
| 3935265 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.81 | 71.0 | 6.63e-01 | 100.0% | 82.0% |
| 3386184 | 2004.1.1.439 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF26341 | 0.78 | 63.0 | 4.11e-01 | 100.0% | 21.5% |
| 4204341 | 5.1.4.74 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N | 0.74 | 49.0 | 2.85e-01 | 72.5% | 7.6% |
| 4881709 | 4156.1.1.2 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_N,HA2_C | 0.74 | 57.0 | 4.75e-01 | 95.0% | 47.4% |
| 3195703 | 103.5.1.6 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › FRG1 | 0.71 | 59.0 | 5.77e-01 | 100.0% | 100.0% |
| 4164573 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.68 | 57.0 | 4.18e-01 | 100.0% | 40.9% |
| 4835480 | 101.1.2.60 ↗ | alpha arrays › HTH › HTH › winged helix domain › HA2_N | 0.68 | 47.0 | 3.96e-01 | 72.5% | 40.3% |
| 4947037 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.68 | 59.0 | 3.46e-01 | 95.0% | 12.9% |
| 3208129 | 3443.1.1.0 ↗ | alpha duplicates or obligate multimers › Get5 carboxyl domain › Get5 carboxyl domain › Get5 carboxyl domain | 0.62 | 46.0 | 4.63e-01 | 87.5% | 85.7% |
| 3219149 | 109.1.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C | 0.59 | 41.0 | 2.82e-01 | 80.0% | 19.4% |