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MH884509.1__AYP68436.1__BboS125_00067__00066
Bact-VirMH884509.1__AYP68436.1__BboS125_00067__00066
Identity
- Accession:
- MH884509 ↗
- Kingdom:
- phage
Quality
84.8
mean pLDDT
Taxonomy
TaxID: 2419618
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-67_163-280
Domain cluster:
rep: OP172808.1__WAX16238.1__EL753P1_00016__00016__D16-72_146-260
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05133.20 best | SPP1_portal | 25.9 | 7.50e-06 | 84.9% | 21.2% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1di2A00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 20.0 | 3.20e-01 | 76.8% | 92.8% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3942943 | 4056.1.1.1 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Phage_prot_Gp6 | 0.72 | 57.0 | 5.04e-01 | 82.2% | 100.0% |
| 2537708 | 4056.1.1.4 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Head-tail_con | 0.60 | 43.0 | 4.95e-01 | 74.1% | 100.0% |
| 4463771 | 3347.1.1.0 ↗ | beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 | 0.55 | 31.0 | 4.14e-01 | 76.2% | 100.0% |
| None | — | 0.55 | 38.0 | 3.11e-01 | 71.4% | 88.3% | |
| 3926329 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.54 | 33.0 | 3.40e-01 | 83.8% | 60.3% |
| 3999197 | 5.1.4.164 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 | 0.53 | 37.0 | 3.00e-01 | 71.9% | 95.4% |
D2
medium
residues 82-162_374-456
Domain cluster:
rep: IMGVR_UViG_3300033170_000053-3300033170-Ga0334884_100475316__D73-157_356-418
D3
medium
residues 458-512
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.74 | 51.0 | 4.23e-01 | 85.5% | 44.0% |
| 4wzsB00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.66 | 48.0 | 3.83e-01 | 78.2% | 39.8% |
| 4di1C02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.64 | 41.0 | 4.62e-01 | 72.7% | 87.8% |
| 4jfcA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.57 | 36.0 | 3.59e-01 | 76.4% | 62.5% |
| 2v9kA01 | 1.10.10.2050 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.56 | 38.0 | 3.89e-01 | 72.7% | 86.0% |
| 4nqwB00 | 1.10.10.1320 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Anti-sigma factor, zinc-finger domain | 0.52 | 42.0 | 3.98e-01 | 98.2% | 79.5% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3164951 | 5094.1.1.1 ↗ | a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › OmpH | 0.66 | 53.0 | 3.64e-01 | 85.5% | 50.0% |
| 4977177 | 7078.1.1.0 ↗ | alpha superhelices › C-terminal domain of SidJ › C-terminal domain of SidJ › C-terminal domain of SidJ | 0.61 | 49.0 | 4.24e-01 | 94.5% | 67.4% |