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MH884510.1__AYP68474.1__EalM137_00024__00024
Bact-VirMH884510.1__AYP68474.1__EalM137_00024__00024
Identity
- Accession:
- MH884510 ↗
- Kingdom:
- phage
Quality
90.9
mean pLDDT
Taxonomy
TaxID: 2419624
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-83
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1e2tA02 | 3.30.1120.150 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.68 | 48.0 | 4.75e-01 | 85.0% | 68.6% |
| 2hzmA02 | 2.20.140.20 | Mainly Beta › Single Sheet › q64v53_bacfr protein fold › | 0.65 | 44.0 | 4.40e-01 | 71.2% | 94.1% |
| 2nrhB02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.65 | 44.0 | 3.58e-01 | 70.0% | 75.0% |
| 4jpqA00 | 2.60.40.1190 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 46.0 | 3.36e-01 | 76.2% | 58.4% |
| 3ap9A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 48.0 | 3.86e-01 | 82.5% | 68.9% |
| 3hbkA00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.59 | 41.0 | 2.96e-01 | 71.2% | 68.4% |
| 1sazA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.58 | 46.0 | 3.70e-01 | 90.0% | 98.3% |
| 3aihB01 | 2.70.130.10 | Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain | 0.58 | 44.0 | 3.99e-01 | 80.0% | 100.0% |
| 4hdjA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 51.0 | 3.36e-01 | 98.8% | 47.3% |
| 8gtyA02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.58 | 49.0 | 3.83e-01 | 92.5% | 70.5% |
| 1vkdA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.58 | 47.0 | 3.20e-01 | 92.5% | 48.8% |
| 3qc2B00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.57 | 49.0 | 3.23e-01 | 97.5% | 43.4% |
| 4k3yC00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.57 | 49.0 | 3.25e-01 | 98.8% | 43.1% |
| 3nppA00 | 2.40.50.480 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function DUF1093 | 0.56 | 38.0 | 3.71e-01 | 70.0% | 90.8% |
| 1q7fB00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.55 | 45.0 | 3.14e-01 | 91.3% | 44.0% |
| 8adnN01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.55 | 42.0 | 3.21e-01 | 81.2% | 75.9% |
| 1t6cA02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.55 | 44.0 | 3.42e-01 | 87.5% | 70.7% |
| 1szzA00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.55 | 42.0 | 3.36e-01 | 85.0% | 65.5% |
| 4tr6A01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.54 | 37.0 | 2.92e-01 | 71.2% | 68.3% |
| 1ud9A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.54 | 37.0 | 2.70e-01 | 72.5% | 48.3% |
| 1zxzB00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.53 | 44.0 | 3.39e-01 | 92.5% | 88.0% |
| 6j8yC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.53 | 36.0 | 2.60e-01 | 71.2% | 47.8% |
| 1mtpA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.53 | 34.0 | 3.28e-01 | 71.2% | 58.2% |
| 3fssA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 39.0 | 3.84e-01 | 81.2% | 84.9% |
| 6j8yA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.51 | 37.0 | 2.59e-01 | 76.2% | 96.5% |
| 6qpwA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 45.0 | 3.64e-01 | 98.8% | 60.1% |
| 2nvwA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.51 | 36.0 | 2.64e-01 | 91.3% | 28.6% |
| 2ymsA00 | 2.40.128.630 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 44.0 | 3.87e-01 | 100.0% | 99.2% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5040575 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.68 | 48.0 | 4.17e-01 | 72.5% | 97.5% |
| 4969308 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.68 | 47.0 | 4.24e-01 | 72.5% | 98.3% |
| 5082200 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.68 | 46.0 | 4.11e-01 | 70.0% | 97.4% |
| 4988335 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.67 | 51.0 | 4.35e-01 | 80.0% | 98.4% |
| 3586216 | 4026.1.1.0 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) | 0.67 | 52.0 | 4.04e-01 | 85.0% | 64.4% |
| 3627160 | 4026.1.1.0 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) | 0.67 | 52.0 | 4.69e-01 | 85.0% | 90.3% |
| 5081740 | 2484.1.1.342 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF29288 | 0.65 | 47.0 | 3.70e-01 | 76.2% | 67.3% |
| 5074822 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.64 | 49.0 | 4.24e-01 | 82.5% | 95.2% |
| 5030390 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.63 | 43.0 | 4.18e-01 | 80.0% | 62.9% |
| 3244141 | 5.1.4.320 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_LRRK2 | 0.61 | 53.0 | 3.40e-01 | 93.8% | 34.6% |
| 3255777 | 4075.1.1.2 ↗ | a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 | 0.61 | 46.0 | 4.38e-01 | 80.0% | 98.9% |
| 3229412 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.59 | 46.0 | 4.19e-01 | 82.5% | 71.4% |
| 4281581 | 5.1.4.254 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_NOL10_N | 0.58 | 50.0 | 3.12e-01 | 92.5% | 34.0% |
| 3508171 | 3392.1.1.1 ↗ | a+b two layers › Cytoplasmic domain of BfpC › Cytoplasmic domain of BfpC › Cytoplasmic domain of BfpC › PAP_PilO | 0.58 | 40.0 | 3.12e-01 | 70.0% | 48.5% |
| 3264756 | 4075.1.1.2 ↗ | a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 | 0.57 | 47.0 | 4.38e-01 | 88.7% | 98.0% |
| 3311775 | 63.1.1.3 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › PRKCSH | 0.57 | 45.0 | 3.80e-01 | 90.0% | 86.9% |
| 3925946 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 47.0 | 3.05e-01 | 93.8% | 38.7% |
| 3223155 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.56 | 43.0 | 3.02e-01 | 81.2% | 30.3% |
| 3738714 | 220.1.1.74 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H | 0.55 | 42.0 | 3.85e-01 | 83.7% | 82.7% |
| 5058109 | 220.1.1.76 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 | 0.54 | 38.0 | 3.69e-01 | 75.0% | 81.1% |
| 4961045 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 47.0 | 2.98e-01 | 100.0% | 38.8% |
| 3424294 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 39.0 | 3.77e-01 | 76.2% | 97.8% |
| 5040710 | 2484.1.1.139 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF429 | 0.52 | 42.0 | 3.13e-01 | 88.7% | 49.5% |
| 4991403 | 2004.1.1.308 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 | 0.52 | 43.0 | 2.88e-01 | 95.0% | 28.1% |
| 4064452 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.52 | 33.0 | 2.81e-01 | 71.2% | 36.4% |
| 3802207 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.52 | 45.0 | 3.05e-01 | 100.0% | 52.1% |
| 1117625 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.51 | 45.0 | 2.86e-01 | 100.0% | 35.2% |
| 2805173 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.51 | 35.0 | 3.07e-01 | 71.2% | 93.6% |
| 4323235 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.51 | 43.0 | 3.91e-01 | 95.0% | 90.0% |