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MH884510.1__AYP68475.1__EalM137_00025__00025

Bact-Vir

MH884510.1__AYP68475.1__EalM137_00025__00025

Identity

Accession:
MH884510 ↗
Kingdom:
phage

Quality

82.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Exiguobacterium_phage_vB_EalM-137

TaxID: 2419624

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-40_59-145
PDB
Domain cluster: representative
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vh6A01 6.10.140.1940 Special › Helix non-globular › Helix Hairpins › 0.70 58.0 6.15e-01 90.2% 100.0%
1kfdA02 1.20.1060.10 Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 0.67 41.0 5.14e-01 97.3% 98.6%
4hteA01 1.20.58.1730 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.63 46.0 4.27e-01 76.8% 76.9%
1sziA02 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.59 41.0 3.84e-01 72.3% 86.1%
5k3hB04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.58 48.0 4.54e-01 88.4% 96.2%
5dqqA01 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.57 41.0 3.91e-01 98.2% 64.1%
3pwfA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.57 39.0 3.74e-01 92.0% 61.1%
1z6oA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.56 50.0 4.04e-01 97.3% 62.7%
6p6jB01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.56 43.0 3.16e-01 82.1% 93.9%
2gd5A00 6.10.140.1230 Special › Helix non-globular › Helix Hairpins › 0.55 45.0 4.12e-01 95.5% 67.6%
3wmeA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.54 42.0 3.00e-01 82.1% 91.2%
2wgmA01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.54 33.0 3.78e-01 74.1% 84.1%
2z1qB04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.53 42.0 4.01e-01 85.7% 91.9%
1yuzB01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.52 47.0 4.39e-01 96.4% 84.1%
2ihr101 1.20.58.410 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Release factor 0.51 43.0 4.45e-01 99.1% 95.3%
2d1lA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.51 45.0 3.42e-01 93.8% 70.7%
1wdzA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.50 43.0 3.43e-01 93.8% 76.2%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3589001 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.75 61.0 6.21e-01 100.0% 89.8%
3929825 633.21.1.0 ↗ alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 0.71 42.0 4.13e-01 98.2% 55.0%
3228302 601.1.2.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) 0.63 39.0 3.84e-01 95.5% 57.5%
4969098 3926.1.1.0 ↗ alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D 0.61 49.0 4.15e-01 83.0% 90.3%
4013484 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.60 44.0 3.57e-01 76.8% 69.8%
4001411 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.60 40.0 3.50e-01 75.0% 47.5%
4983021 3877.1.1.0 ↗ alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC 0.59 43.0 3.92e-01 75.9% 56.7%
3395652 601.1.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.58 44.0 4.42e-01 98.2% 77.4%
3918141 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.54 39.0 3.77e-01 75.9% 93.8%
3249343 4177.1.1.0 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.52 45.0 3.65e-01 96.4% 70.7%
3516779 601.15.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Proteasome activator reg(alpha) › Proteasome activator reg(alpha) 0.52 47.0 3.75e-01 98.2% 77.7%
4441546 4006.1.1.1 ↗ alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.51 41.0 4.35e-01 97.3% 100.0%
4266268 192.8.1.376 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › RRP36 0.51 46.0 4.14e-01 96.4% 71.3%
2082759 6151.1.1.1 ↗ alpha bundles › Helical bundle domain in S46 peptidase › Helical bundle domain in S46 peptidase › Helical bundle domain in S46 peptidase › Peptidase_S46 0.50 45.0 3.37e-01 100.0% 100.0%
4346157 3684.1.1.28 ↗ alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PF26154 0.50 38.0 3.74e-01 98.2% 73.6%