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MH884511.1__AYP68561.1__EalM132_00047__00047

Bact-Vir

MH884511.1__AYP68561.1__EalM132_00047__00047

Identity

Accession:
MH884511 ↗
Kingdom:
phage

Quality

93.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-53
PDB
Domain cluster: representative
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3me5A01 1.10.260.140 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › 0.69 56.0 5.25e-01 96.2% 73.4%
2riqA01 1.10.20.130 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › 0.69 52.0 4.97e-01 100.0% 71.2%
1gvfB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.68 42.0 2.65e-01 100.0% 12.0%
1s7zA01 1.20.120.780 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DNA mimic ocr 0.65 58.0 4.69e-01 100.0% 53.5%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.63 40.0 3.96e-01 90.6% 60.7%
7qaqA01 3.40.50.11710 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase 0.62 53.0 3.56e-01 100.0% 25.4%
2l2mA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.61 51.0 4.65e-01 94.3% 95.7%
1ashA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.60 42.0 3.13e-01 75.5% 80.3%
2z1dA01 3.40.50.11750 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HypD, alpha/beta domain 1 0.60 49.0 3.68e-01 94.3% 78.0%
2w4sA00 1.10.10.1440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PHAX RNA-binding domain 0.60 42.0 3.61e-01 73.6% 47.7%
6f7hA00 1.20.1080.10 Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. 0.57 46.0 3.14e-01 100.0% 59.8%
2o7gA00 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.57 46.0 3.91e-01 98.1% 53.4%
1xl3C00 1.20.1280.80 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.57 40.0 3.38e-01 75.5% 51.6%
2qddA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.56 46.0 3.46e-01 90.6% 90.0%
3ke3A02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.56 47.0 3.11e-01 100.0% 67.2%
4jhmA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.56 45.0 3.57e-01 92.5% 100.0%
4usaA02 1.10.150.120 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain 0.56 42.0 3.27e-01 81.1% 37.0%
1a3qA01 2.60.40.340 Mainly Beta › Sandwich › Immunoglobulin-like › Rel homology domain (RHD), DNA-binding domain 0.55 41.0 2.81e-01 94.3% 23.5%
3ty4B00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.55 47.0 2.91e-01 100.0% 88.2%
2kvdA02 1.10.720.30 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain 0.55 41.0 4.13e-01 92.5% 86.2%
1wyuB02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.54 45.0 3.54e-01 98.1% 58.6%
3di5A00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.53 42.0 3.28e-01 100.0% 65.8%
3t0yA01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.53 40.0 3.80e-01 86.8% 68.2%
3oqvA00 3.40.50.11710 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase 0.53 44.0 3.04e-01 100.0% 25.1%
2nrkA00 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.52 42.0 3.04e-01 92.5% 37.0%
3ripA02 1.20.120.1900 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Gamma-tubulin complex, C-terminal domain 0.51 41.0 2.58e-01 94.3% 16.5%
2pmuC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 38.0 3.31e-01 84.9% 97.8%
2ktmA00 1.10.790.10 Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain 0.51 45.0 4.15e-01 100.0% 77.9%
1rh5A00 1.10.3370.10 Mainly Alpha › Orthogonal Bundle › Preprotein translocase SecY subunit › SecY subunit domain 0.51 44.0 2.62e-01 98.1% 95.1%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3699757 632.18.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 0.72 59.0 5.55e-01 100.0% 90.0%
3690457 130.1.1.16 alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › Ish1 0.69 51.0 5.00e-01 98.1% 73.3%
4959335 601.48.1.0 alpha bundles › Four-helical up-and-down bundle › vWA2 C-terminal domain › vWA2 C-terminal domain 0.67 58.0 4.78e-01 98.1% 60.0%
4567937 130.1.1.0 alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif 0.66 52.0 5.36e-01 98.1% 94.0%
3440159 130.1.1.0 alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif 0.66 55.0 4.82e-01 98.1% 64.7%
3512653 130.1.1.2 alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › LEM 0.65 52.0 5.24e-01 100.0% 92.7%
3180487 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.62 50.0 3.43e-01 88.7% 66.7%
4488191 191.1.1.0 alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain 0.61 53.0 4.16e-01 98.1% 92.2%
3326565 130.1.1.42 alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › DUF7787 0.61 41.0 4.29e-01 84.9% 84.4%
4971048 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.60 36.0 3.09e-01 75.5% 36.5%
137635 3818.1.1.1 alpha arrays › PHAX RNA-binding domain › PHAX RNA-binding domain › PHAX RNA-binding domain › PHAX_RNA-bd 0.60 42.0 3.61e-01 73.6% 47.7%
4014978 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 45.0 3.91e-01 100.0% 51.1%
4267061 2484.1.1.40 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX 0.59 41.0 3.11e-01 100.0% 29.6%
3852964 101.1.17.14 alpha arrays › HTH › HTH › FF domain › ANATO 0.58 35.0 3.19e-01 90.6% 42.7%
4950230 2004.1.1.196 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.57 46.0 3.22e-01 100.0% 27.0%
3291724 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.57 45.0 3.99e-01 98.1% 77.8%
3542152 397.7.1.7 few secondary structure elements › Toxic hairpin › Ribosome-inactivating protein luffin P1 › Ribosome-inactivating protein luffin P1 › BSMAP 0.56 40.0 3.44e-01 100.0% 44.4%
5037640 304.51.1.0 a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related 0.56 44.0 3.04e-01 92.5% 80.5%
3925132 170.2.1.0 alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein N-terminal domain › Retrovirus capsid protein N-terminal domain 0.56 45.0 3.82e-01 100.0% 76.2%
3499633 198.1.1.2 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 0.55 40.0 3.59e-01 98.1% 53.8%
3828982 7510.1.1.0 a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like 0.54 45.0 3.32e-01 98.1% 74.0%
3305941 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.53 46.0 3.61e-01 100.0% 75.8%
4973214 2008.1.1.210 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF27324 0.52 41.0 2.91e-01 100.0% 26.7%
3511834 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.52 46.0 3.44e-01 100.0% 48.5%
4155643 3788.1.1.12 alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › CCD48 0.52 41.0 3.79e-01 88.7% 80.0%
3195747 3788.1.1.0 alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) 0.52 44.0 4.08e-01 100.0% 74.3%
D2 high residues 64-150
PDB
Domain cluster: representative
CATH (85)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4b6xA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.88 58.0 6.44e-01 100.0% 84.1%
3rfyA02 1.20.120.290 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle 0.88 45.0 4.12e-01 100.0% 41.1%
2etnB01 1.10.287.180 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain 0.87 59.0 6.36e-01 100.0% 80.3%
1grjA01 1.10.287.180 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain 0.86 60.0 6.46e-01 100.0% 83.8%
3rh3A01 1.20.120.930 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF12889, N-terminal DUF3829 0.86 56.0 4.78e-01 100.0% 43.6%
4ijjB00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.86 50.0 4.29e-01 100.0% 39.2%
3axjB02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.84 43.0 4.43e-01 100.0% 51.8%
2bdeA03 1.20.58.1160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.84 61.0 6.44e-01 100.0% 84.4%
4mtxD00 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.84 53.0 5.15e-01 100.0% 58.9%
1wleA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.83 59.0 5.35e-01 100.0% 56.1%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.81 60.0 6.46e-01 100.0% 89.3%
3layF00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.80 54.0 5.75e-01 100.0% 78.2%
4u7iA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.80 50.0 4.96e-01 100.0% 60.2%
6r1nA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.80 60.0 5.64e-01 100.0% 66.0%
2qffA00 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.78 46.0 4.94e-01 93.1% 68.9%
6gy8A01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.77 62.0 4.05e-01 100.0% 22.0%
1w9rA00 1.20.58.440 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › choline binding protein A 0.77 56.0 5.04e-01 100.0% 56.3%
3eabE00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.76 49.0 4.98e-01 98.9% 66.3%
2ewfA02 1.20.1270.310 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.74 43.0 4.49e-01 96.6% 61.7%
2etdA00 1.20.1440.20 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › LemA-like domain 0.74 66.0 5.64e-01 100.0% 88.7%
3zbhA00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.73 51.0 5.04e-01 100.0% 68.9%
3teqB00 1.10.287.3550 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.73 56.0 5.32e-01 100.0% 69.3%
1nt2B02 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.72 53.0 6.04e-01 94.3% 100.0%
2gtsA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.72 53.0 5.62e-01 100.0% 87.0%
2p7vA00 1.20.120.1370 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Regulator of RNA polymerase sigma(70) subunit, domain 4 0.72 57.0 4.71e-01 100.0% 49.0%
2iakA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.71 51.0 3.85e-01 100.0% 33.3%
2vs0A00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.71 45.0 4.65e-01 100.0% 68.3%
4g6dB02 6.10.140.1800 Special › Helix non-globular › Helix Hairpins › 0.71 60.0 6.18e-01 94.3% 100.0%
3nbxX03 1.20.58.1510 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 46.0 4.39e-01 95.4% 57.4%
2uubT00 1.20.58.110 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 0.70 43.0 4.10e-01 98.9% 53.5%
3edvB01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.69 54.0 4.68e-01 100.0% 53.7%
3vkgA12 1.10.287.2610 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.68 64.0 4.66e-01 100.0% 40.5%
4dxwA02 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.68 55.0 5.05e-01 87.4% 92.0%
1s35A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.68 46.0 4.40e-01 100.0% 60.4%
1a36A04 1.10.132.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.68 52.0 4.14e-01 100.0% 41.1%
2c5iT00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 49.0 4.85e-01 100.0% 71.3%
4aflA00 6.10.140.1740 Special › Helix non-globular › Helix Hairpins › 0.67 62.0 5.88e-01 100.0% 85.3%
3fppA03 6.10.140.1990 Special › Helix non-globular › Helix Hairpins › 0.67 56.0 5.58e-01 100.0% 88.6%
3na7A00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.67 60.0 4.29e-01 100.0% 35.4%
1fewA00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.66 60.0 4.71e-01 100.0% 49.7%
2ic6A00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 49.0 5.30e-01 98.9% 100.0%
2xubA05 6.10.140.1450 Special › Helix non-globular › Helix Hairpins › 0.65 60.0 5.86e-01 100.0% 97.9%
5o5jT00 1.20.58.110 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 0.65 45.0 4.54e-01 82.8% 72.9%
3edvA02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 53.0 4.16e-01 97.7% 42.6%
3k29A00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.64 58.0 4.74e-01 100.0% 55.3%
2hydA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.64 58.0 3.89e-01 100.0% 68.7%
6tkvA01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.64 46.0 4.97e-01 100.0% 97.1%
4h63H01 1.20.58.1710 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.63 47.0 5.04e-01 100.0% 97.2%
6v9zA02 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.63 57.0 3.82e-01 100.0% 27.4%
3zdqA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.63 57.0 3.80e-01 100.0% 26.4%
3h6pC00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.63 40.0 4.87e-01 94.3% 100.0%
6grjB01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.63 57.0 3.86e-01 100.0% 34.9%
4mycA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.63 55.0 3.77e-01 100.0% 58.8%
4xxiA00 1.10.490.20 Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins 0.63 47.0 4.03e-01 81.6% 81.0%
3okqA00 1.20.58.1540 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain 0.63 55.0 4.91e-01 98.9% 68.0%
2i0mA01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.63 46.0 4.35e-01 100.0% 64.2%
1g8xA06 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 57.0 3.78e-01 98.9% 27.0%
2gd5A00 6.10.140.1230 Special › Helix non-globular › Helix Hairpins › 0.62 57.0 4.78e-01 100.0% 61.3%
3tulB00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.62 56.0 4.85e-01 100.0% 66.9%
1u5pA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 47.0 4.42e-01 100.0% 66.7%
3fb2A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 50.0 4.73e-01 92.0% 73.3%
3favD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.61 50.0 5.30e-01 100.0% 98.7%
1i4dA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.61 55.0 4.26e-01 100.0% 59.0%
4w4kA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.61 52.0 5.42e-01 100.0% 98.8%
2b5uA02 1.10.287.620 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins 0.60 54.0 4.43e-01 100.0% 54.7%
2wzkA03 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.60 43.0 4.04e-01 97.7% 60.0%
1vq8V00 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.60 39.0 4.37e-01 87.4% 87.7%
4dciA00 6.10.140.1110 Special › Helix non-globular › Helix Hairpins › 0.60 54.0 4.50e-01 100.0% 58.5%
1hciA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 53.0 4.68e-01 98.9% 68.3%
3rrkA02 1.20.1460.20 Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › 0.59 54.0 4.38e-01 100.0% 55.5%
1ydxA02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.58 52.0 5.15e-01 100.0% 93.3%
2odvA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 46.0 4.26e-01 100.0% 67.0%
4lwsA00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.58 51.0 4.87e-01 100.0% 84.0%
7dluA01 1.10.287.1260 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.58 44.0 4.16e-01 95.4% 66.7%
3pltA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.58 52.0 3.89e-01 100.0% 42.5%
3s84A02 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.58 47.0 3.86e-01 92.0% 49.0%
2kg7B00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.57 45.0 4.36e-01 100.0% 76.3%
6ynwH01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.57 44.0 4.68e-01 95.4% 100.0%
3frrA00 1.20.1260.60 Mainly Alpha › Up-down Bundle › Ferritin › Vacuolar protein sorting-associated protein Ist1 0.56 50.0 3.92e-01 100.0% 65.1%
1wa8A00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.56 47.0 4.53e-01 96.6% 81.8%
1w0bA01 1.20.58.420 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP 0.56 39.0 3.84e-01 100.0% 68.5%
3r84B00 6.10.280.160 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 0.55 46.0 4.76e-01 93.1% 98.8%
4ioeA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.55 46.0 4.66e-01 98.9% 95.4%
7z67A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 43.0 3.27e-01 88.5% 95.9%
4mk6A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.52 38.0 2.99e-01 78.2% 69.1%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4214119 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.86 60.0 4.05e-01 100.0% 22.5%
4414254 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.84 64.0 4.33e-01 100.0% 24.6%
4384750 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.82 62.0 6.06e-01 100.0% 72.6%
4016635 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.78 60.0 5.74e-01 100.0% 70.0%
3564399 3755.3.1.282 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Tmemb_cc2 0.77 53.0 4.82e-01 100.0% 53.9%
4026286 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.77 63.0 5.32e-01 100.0% 55.6%
4682355 632.22.1.1 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA 0.77 48.0 4.90e-01 96.6% 64.7%
4411856 632.22.1.1 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA 0.76 45.0 4.43e-01 100.0% 54.7%
4086402 632.22.1.1 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA 0.75 44.0 4.54e-01 100.0% 60.0%
3603512 633.5.1.1 alpha bundles › Bromodomain-like › LemA-like › LemA-like › LemA 0.75 69.0 5.76e-01 100.0% 85.5%
3600956 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.75 55.0 4.20e-01 100.0% 34.7%
4076485 632.22.1.1 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA 0.75 44.0 4.52e-01 100.0% 60.0%
4468076 632.22.1.1 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA 0.75 47.0 4.80e-01 96.6% 64.7%
3593195 110.1.1.0 alpha arrays › DEATH domain › DEATH domain › DEATH domain 0.73 49.0 4.99e-01 72.4% 70.6%
4406698 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.71 64.0 6.23e-01 100.0% 87.4%
3393794 3922.1.1.211 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › DRC7_C 0.71 52.0 4.48e-01 100.0% 49.6%
5002845 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.71 65.0 5.81e-01 100.0% 78.3%
3699295 5086.1.1.158 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › Sec5 0.70 66.0 5.64e-01 100.0% 66.9%
4935333 3755.3.1.637 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 0.70 63.0 5.10e-01 100.0% 55.3%
4936790 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.70 60.0 5.63e-01 100.0% 76.2%
4947567 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.69 54.0 3.38e-01 100.0% 15.9%
4937862 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.69 62.0 5.65e-01 100.0% 75.5%
3487862 212.1.1.0 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.68 58.0 4.15e-01 100.0% 32.9%
3477822 1147.1.1.1 alpha bundles › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › Occludin_ELL 0.68 62.0 5.48e-01 100.0% 74.4%
3595239 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.67 60.0 5.28e-01 100.0% 78.5%
2750143 3758.1.1.1 alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins › Bacillus_HBL 0.67 63.0 4.81e-01 100.0% 64.8%
3976632 3291.1.1.4 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › PspA_IM30 0.67 63.0 5.11e-01 100.0% 58.0%
3592587 3567.1.1.0 a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.67 60.0 5.25e-01 100.0% 67.2%
3836427 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.67 59.0 5.67e-01 100.0% 83.0%
4018440 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.66 60.0 5.87e-01 100.0% 89.5%
5056869 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.66 61.0 4.77e-01 100.0% 61.7%
222846 150.5.1.1 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 0.65 54.0 5.32e-01 100.0% 82.8%
4931319 2003.1.1.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Shikimate_DH 0.64 49.0 3.58e-01 92.0% 28.8%
3593427 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.64 60.0 4.86e-01 100.0% 56.1%
3476610 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.63 58.0 5.01e-01 98.9% 66.9%
4532729 547.1.1.1 alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer 0.63 50.0 4.70e-01 95.4% 70.5%
3190576 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.63 52.0 4.79e-01 88.5% 91.8%
3611289 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.63 49.0 4.16e-01 100.0% 50.3%
4418753 3755.3.1.363 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › T1-F 0.63 58.0 3.96e-01 100.0% 70.9%
3487203 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.63 56.0 5.67e-01 100.0% 97.6%
3399984 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.63 57.0 4.67e-01 98.9% 56.1%
3692987 3755.3.1.481 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › PF30554 0.63 59.0 4.44e-01 100.0% 88.4%
3666832 4177.2.1.4 alpha duplicates or obligate multimers › BAR/IMD domain-like › Inhibitor of kappaB kinase beta dimerization domain › Inhibitor of kappaB kinase beta dimerization domain › ATG17_like 0.63 57.0 3.74e-01 100.0% 24.9%
3695361 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.63 57.0 5.02e-01 98.9% 69.6%
3470483 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.62 57.0 4.91e-01 98.9% 66.9%
3767783 192.2.1.19 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › FAM186A-B_C 0.62 53.0 4.44e-01 100.0% 54.0%
3657123 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.62 56.0 5.42e-01 100.0% 88.4%
4992337 192.7.1.0 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.62 56.0 4.81e-01 100.0% 67.4%
3359919 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.62 54.0 5.06e-01 98.9% 77.8%
3560590 3755.3.1.142 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › FAM186A-B_C 0.61 52.0 4.35e-01 100.0% 54.0%
3852832 3922.1.1.72 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › FAM186A-B_C 0.61 52.0 4.36e-01 100.0% 54.0%
3362816 4177.2.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › Inhibitor of kappaB kinase beta dimerization domain › Inhibitor of kappaB kinase beta dimerization domain 0.61 56.0 3.80e-01 100.0% 29.2%
3846034 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.61 55.0 4.71e-01 98.9% 63.7%
3543090 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.60 46.0 4.41e-01 100.0% 69.5%
3596922 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.60 52.0 4.37e-01 100.0% 56.3%
4021695 4121.1.1.0 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.60 54.0 3.70e-01 100.0% 29.8%
3692803 1147.1.1.3 alpha bundles › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › CNNM 0.60 56.0 5.03e-01 100.0% 75.7%
3840064 192.24.1.0 alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain 0.59 53.0 5.17e-01 100.0% 92.6%
3896888 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.59 51.0 4.48e-01 95.4% 64.8%
4446038 192.5.1.0 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat 0.58 53.0 5.39e-01 97.7% 100.0%
3404270 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.58 48.0 4.23e-01 96.6% 60.8%
3962893 150.5.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.58 53.0 5.18e-01 100.0% 95.8%
3164951 5094.1.1.1 a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › OmpH 0.56 50.0 4.04e-01 100.0% 52.4%
3699463 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.56 50.0 3.76e-01 100.0% 48.4%
3275929 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.56 48.0 4.17e-01 93.1% 75.4%
3664164 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.55 49.0 4.31e-01 98.9% 73.8%
4515899 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.55 48.0 3.84e-01 100.0% 49.4%
4303085 3755.3.1.467 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DRC7_C 0.54 47.0 4.27e-01 96.6% 70.8%
3798232 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.54 42.0 4.23e-01 100.0% 85.2%
4223385 150.5.1.1 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 0.53 46.0 4.47e-01 100.0% 90.0%
3792061 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.52 45.0 4.29e-01 100.0% 79.6%