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MH884511.1__AYP68643.1__EalM132_00131__00129

Bact-Vir

MH884511.1__AYP68643.1__EalM132_00131__00129

Identity

Accession:
MH884511 ↗
Kingdom:
phage

Quality

80.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-98
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF25742.2 best Phage_Gene33 104.3 5.20e-30 100.0% 78.8%
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.79 50.0 5.89e-01 80.5% 100.0%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.78 57.0 6.11e-01 90.9% 89.4%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.78 50.0 5.40e-01 79.2% 76.9%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.78 56.0 6.19e-01 94.8% 96.7%
3hfnA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.77 56.0 6.23e-01 93.5% 98.3%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.74 56.0 5.98e-01 94.8% 93.9%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 48.0 4.95e-01 85.7% 69.9%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 62.0 5.95e-01 97.4% 81.4%
1f39A00 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.73 48.0 4.41e-01 84.4% 51.5%
1m5q101 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 57.0 6.05e-01 88.3% 94.1%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 51.0 5.54e-01 85.7% 90.3%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 48.0 5.56e-01 76.6% 100.0%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 54.0 5.69e-01 97.4% 88.4%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 48.0 5.50e-01 88.3% 96.4%
4c92B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 63.0 5.64e-01 96.1% 70.5%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 44.0 5.25e-01 76.6% 100.0%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.70 60.0 5.93e-01 100.0% 89.2%
5mkiH00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 57.0 5.88e-01 94.8% 95.8%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.68 57.0 5.22e-01 92.2% 71.1%
2fb7A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 48.0 4.74e-01 76.6% 86.3%
2qeaB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 52.0 4.18e-01 88.3% 78.2%
1t6aA02 3.30.310.120 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein 0.65 37.0 3.77e-01 71.4% 56.4%
1zc3B00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 49.0 4.39e-01 83.1% 76.1%
2i02A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 50.0 4.15e-01 90.9% 89.3%
4nehA01 2.130.10.130 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal 0.61 51.0 3.26e-01 92.2% 23.8%
2qm4A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.61 43.0 3.57e-01 75.3% 82.5%
1r4kA01 2.170.260.10 Mainly Beta › Beta Complex › paz domain › paz domain 0.60 54.0 4.50e-01 100.0% 78.0%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.60 52.0 4.96e-01 100.0% 87.1%
2kt4B01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 45.0 3.72e-01 85.7% 64.1%
4gzvA00 2.40.128.490 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14869 family, DUF4488 0.57 43.0 3.57e-01 80.5% 89.9%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.57 43.0 3.75e-01 81.8% 85.2%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.57 42.0 3.18e-01 79.2% 84.1%
1qftB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 46.0 3.69e-01 93.5% 72.2%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 41.0 4.44e-01 89.6% 96.8%
3qkgA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 46.0 3.72e-01 94.8% 72.0%
6m3aA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 35.0 3.76e-01 88.3% 74.2%
1ywuA00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.55 39.0 3.37e-01 74.0% 64.0%
6qp7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 46.0 2.86e-01 96.1% 23.5%
3h6qA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.55 42.0 3.36e-01 85.7% 97.6%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.55 37.0 2.64e-01 71.4% 49.4%
3htyA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.55 45.0 4.28e-01 94.8% 98.9%
4lgvD02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.54 42.0 2.94e-01 84.4% 79.2%
8jx6A02 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.54 39.0 3.62e-01 77.9% 99.0%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.54 40.0 3.24e-01 87.0% 39.6%
1u17A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 46.0 3.55e-01 97.4% 94.1%
4mveA00 2.40.128.580 Mainly Beta › Beta Barrel › Lipocalin › GXWXG domain 0.54 43.0 3.64e-01 93.5% 78.2%
1yloE02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.54 43.0 4.20e-01 90.9% 79.8%
5ejlA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.54 41.0 3.53e-01 81.8% 82.3%
3holA04 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.53 45.0 3.78e-01 97.4% 97.2%
4zciA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 42.0 3.88e-01 93.5% 66.3%
4kh8A01 2.40.128.540 Mainly Beta › Beta Barrel › Lipocalin › Domain of unknown function DUF4822 0.52 40.0 3.17e-01 83.1% 82.5%
2k4vA00 3.30.160.370 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 0.52 39.0 3.32e-01 79.2% 76.0%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 42.0 3.40e-01 93.5% 84.8%
3voqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 41.0 3.65e-01 90.9% 80.2%
4p04A01 2.60.40.3100 Mainly Beta › Sandwich › Immunoglobulin-like › Arylsulphate sulphotransferase monomer, N-terminal domain 0.51 37.0 3.34e-01 75.3% 56.6%
2lnjA00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.51 40.0 3.22e-01 89.6% 45.3%
ECOD (77)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3839016 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.87 63.0 6.83e-01 89.6% 89.2%
4293453 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.85 67.0 6.66e-01 89.6% 80.0%
4451993 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.84 59.0 6.54e-01 89.6% 93.3%
4499953 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.84 60.0 6.63e-01 89.6% 95.0%
4058174 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.83 60.0 6.50e-01 89.6% 89.2%
3941391 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.83 62.0 6.87e-01 94.8% 100.0%
3989574 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.83 69.0 6.68e-01 98.7% 81.2%
4656461 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.82 59.0 6.53e-01 89.6% 95.0%
3570399 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 65.0 7.11e-01 90.9% 98.5%
3404643 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 69.0 7.22e-01 92.2% 97.1%
4073433 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.81 68.0 6.78e-01 89.6% 88.7%
4163851 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.81 58.0 6.42e-01 89.6% 95.0%
5074749 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 59.0 6.14e-01 94.8% 84.3%
4281699 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 67.0 6.83e-01 89.6% 93.3%
4662294 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 55.0 6.30e-01 87.0% 100.0%
3272363 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.79 63.0 5.86e-01 85.7% 69.5%
1482194 4.1.1.96 beta barrels › SH3 › SH3 › SH3 › Hfq 0.78 56.0 6.19e-01 94.8% 96.7%
3625817 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.77 59.0 5.90e-01 94.8% 78.8%
3507639 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.77 60.0 6.28e-01 97.4% 91.4%
3786412 4.1.1.344 beta barrels › SH3 › SH3 › SH3 › PF31193 0.77 62.0 6.17e-01 85.7% 86.3%
3598125 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 57.0 5.82e-01 85.7% 80.0%
4555816 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 63.0 6.13e-01 89.6% 80.0%
3971321 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.77 60.0 6.32e-01 93.5% 94.2%
3907190 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.77 61.0 5.64e-01 90.9% 68.4%
4078162 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 65.0 6.65e-01 93.5% 94.6%
4340758 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 63.0 6.56e-01 89.6% 100.0%
3941004 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 66.0 6.50e-01 93.5% 91.3%
4228570 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 62.0 6.20e-01 89.6% 91.3%
4251101 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 62.0 6.05e-01 89.6% 83.5%
3989898 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.74 58.0 6.21e-01 97.4% 98.5%
3847592 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 51.0 3.10e-01 83.1% 12.0%
3218198 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 49.0 5.66e-01 88.3% 94.5%
3637664 4.1.1.225 beta barrels › SH3 › SH3 › SH3 › DUF7025 0.74 64.0 5.49e-01 94.8% 63.3%
3928711 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 53.0 5.13e-01 88.3% 68.2%
3936130 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 58.0 5.39e-01 89.6% 68.4%
3328647 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.73 55.0 5.37e-01 89.6% 72.9%
3173156 4.1.1.344 beta barrels › SH3 › SH3 › SH3 › PF31193 0.73 56.0 5.56e-01 89.6% 78.8%
3879653 4.1.1.223 beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.73 57.0 6.02e-01 96.1% 92.9%
3645395 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.72 58.0 5.75e-01 85.7% 97.5%
3624163 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 58.0 5.49e-01 93.5% 73.3%
4220126 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 59.0 5.76e-01 89.6% 80.0%
3220929 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 62.0 6.36e-01 93.5% 97.3%
5011460 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 58.0 6.03e-01 89.6% 94.3%
3936053 4.1.1.71 beta barrels › SH3 › SH3 › SH3 › Gemin7 0.72 59.0 6.17e-01 98.7% 97.1%
3574742 4.1.1.47 beta barrels › SH3 › SH3 › SH3 › Gemin6 0.72 57.0 5.42e-01 93.5% 73.3%
4613812 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 58.0 5.69e-01 89.6% 83.5%
3704305 4.1.1.344 beta barrels › SH3 › SH3 › SH3 › PF31193 0.71 57.0 5.91e-01 93.5% 94.3%
3387378 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.70 63.0 6.15e-01 98.7% 91.8%
2126408 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.69 57.0 5.60e-01 94.8% 84.0%
2831853 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.69 58.0 4.55e-01 93.5% 44.7%
1793524 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.68 58.0 5.33e-01 93.5% 71.7%
3227009 4.1.1.71 beta barrels › SH3 › SH3 › SH3 › Gemin7 0.68 59.0 5.97e-01 98.7% 97.3%
3789647 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 57.0 4.47e-01 93.5% 45.8%
3484822 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.67 54.0 5.33e-01 98.7% 83.7%
4929472 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 59.0 5.89e-01 100.0% 97.5%
3772638 4.1.1.71 beta barrels › SH3 › SH3 › SH3 › Gemin7 0.66 57.0 5.63e-01 100.0% 91.4%
1548913 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.66 57.0 4.41e-01 97.4% 44.5%
2701178 4.1.1.71 beta barrels › SH3 › SH3 › SH3 › Gemin7 0.65 56.0 5.39e-01 100.0% 85.1%
4405252 219.1.1.18 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 0.64 49.0 4.04e-01 93.5% 45.0%
4528719 4.1.1.438 beta barrels › SH3 › SH3 › SH3 › PF27440 0.61 45.0 4.80e-01 77.9% 95.4%
3754415 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.60 48.0 3.86e-01 89.6% 57.6%
1815428 3454.1.1.1 beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like › PilP 0.60 48.0 4.50e-01 87.0% 73.7%
4568161 283.2.1.18 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Lipoprotein_17 0.59 43.0 4.33e-01 79.2% 77.5%
3943282 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.58 43.0 3.70e-01 77.9% 82.5%
4083044 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.58 39.0 4.03e-01 88.3% 73.3%
4189243 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.57 43.0 3.62e-01 80.5% 78.5%
4246480 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.57 46.0 4.27e-01 87.0% 93.7%
4105189 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.56 46.0 4.25e-01 87.0% 93.7%
3201755 219.1.1.93 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF6540 0.56 48.0 3.82e-01 100.0% 47.6%
3765454 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.55 42.0 3.51e-01 81.8% 90.0%
5043037 5090.1.1.0 beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.53 41.0 3.81e-01 84.4% 93.0%
4640974 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.53 40.0 3.52e-01 81.8% 85.0%
4310932 12.3.1.24 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.52 41.0 2.98e-01 89.6% 82.7%
3960676 298.1.1.0 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.51 40.0 2.69e-01 87.0% 65.2%
3199555 219.1.1.93 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF6540 0.51 37.0 3.25e-01 80.5% 48.8%
4176400 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.51 34.0 3.48e-01 77.9% 70.7%
4040973 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.51 34.0 3.55e-01 70.1% 81.4%