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MH884511.1__AYP68675.1__EalM132_00163__00161
Bact-VirMH884511.1__AYP68675.1__EalM132_00163__00161
Identity
- Accession:
- MH884511 ↗
- Kingdom:
- phage
Quality
70.9
mean pLDDT
Taxonomy
TaxID: 2419623
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-59
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1x0tA02 | 6.20.50.20 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.76 | 52.0 | 5.83e-01 | 96.6% | 93.3% |
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 39.0 | 3.82e-01 | 98.3% | 54.0% |
| 1nj1A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.63 | 47.0 | 3.85e-01 | 79.3% | 80.8% |
| 4fw1A02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.63 | 38.0 | 3.91e-01 | 100.0% | 64.8% |
| 4wi1A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.62 | 46.0 | 3.60e-01 | 79.3% | 69.9% |
| 2j3lA01 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.62 | 48.0 | 3.89e-01 | 84.5% | 77.0% |
| 1g5hB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.61 | 45.0 | 3.71e-01 | 79.3% | 79.4% |
| 1httA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.61 | 45.0 | 3.80e-01 | 79.3% | 82.7% |
| 5i4eA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.60 | 37.0 | 4.05e-01 | 98.3% | 76.1% |
| 2ia7A00 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 49.0 | 4.10e-01 | 94.8% | 86.5% |
| 2i4lB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.60 | 47.0 | 3.91e-01 | 84.5% | 87.1% |
| 4pbpA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 46.0 | 3.24e-01 | 87.9% | 27.2% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.59 | 37.0 | 3.86e-01 | 98.3% | 67.3% |
| 2i2lA01 | 2.10.70.50 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.59 | 40.0 | 4.14e-01 | 100.0% | 78.8% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 38.0 | 4.07e-01 | 98.3% | 80.9% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 36.0 | 3.66e-01 | 98.3% | 66.1% |
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 35.0 | 3.51e-01 | 98.3% | 63.3% |
| 3r4rA02 | 2.60.40.2590 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 48.0 | 3.74e-01 | 100.0% | 78.4% |
| 2yztA00 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 39.0 | 3.82e-01 | 82.8% | 81.8% |
| 4apxB01 | 2.60.40.3430 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 40.0 | 3.27e-01 | 89.7% | 49.2% |
| 2x2zD03 | 2.10.70.70 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.51 | 28.0 | 3.15e-01 | 87.9% | 96.4% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 38.0 | 3.61e-01 | 84.5% | 80.8% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4999716 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.79 | 45.0 | 5.58e-01 | 93.1% | 94.3% |
| 5024226 | 375.1.1.83 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-TFIIB | 0.79 | 45.0 | 5.02e-01 | 96.6% | 73.3% |
| 4981763 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.78 | 48.0 | 5.54e-01 | 96.6% | 90.0% |
| 3819067 | 386.1.1.207 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED_2 | 0.77 | 42.0 | 4.05e-01 | 100.0% | 47.7% |
| 3243842 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.77 | 56.0 | 4.43e-01 | 98.3% | 40.0% |
| 4977068 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.75 | 55.0 | 4.45e-01 | 98.3% | 43.3% |
| 5043972 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.74 | 54.0 | 4.47e-01 | 98.3% | 45.5% |
| 5079725 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.74 | 41.0 | 4.13e-01 | 93.1% | 53.3% |
| 3584345 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.73 | 56.0 | 4.15e-01 | 98.3% | 34.8% |
| 3258369 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 44.0 | 5.09e-01 | 100.0% | 94.7% |
| 5030309 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 41.0 | 4.98e-01 | 93.1% | 94.3% |
| 3540912 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.69 | 51.0 | 3.17e-01 | 79.3% | 92.7% |
| 3877094 | 5.1.3.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40 | 0.68 | 50.0 | 3.13e-01 | 79.3% | 88.5% |
| 4342778 | 5.1.3.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40 | 0.68 | 50.0 | 2.89e-01 | 79.3% | 52.3% |
| 4865244 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 36.0 | 3.52e-01 | 96.6% | 46.0% |
| 4966194 | 375.1.1.130 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_Tnp_IS1 | 0.67 | 42.0 | 4.58e-01 | 100.0% | 82.2% |
| 3907533 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.66 | 39.0 | 4.46e-01 | 98.3% | 85.0% |
| 5009210 | 4042.1.1.3 ↗ | a+b complex topology › barrel domain in beta subunit of DNA dependent RNA-polymerase › barrel domain in beta subunit of DNA dependent RNA-polymerase › barrel domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_5 | 0.66 | 47.0 | 3.29e-01 | 100.0% | 24.4% |
| 4675029 | 4042.1.1.2 ↗ | a+b complex topology › barrel domain in beta subunit of DNA dependent RNA-polymerase › barrel domain in beta subunit of DNA dependent RNA-polymerase › barrel domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_6,RNA_pol_Rpb2_5 | 0.66 | 47.0 | 3.29e-01 | 100.0% | 24.4% |
| 1114686 | 4.1.1.8 ↗ | beta barrels › SH3 › SH3 › SH3 › IN_DBD_C | 0.60 | 37.0 | 3.75e-01 | 100.0% | 62.5% |
| 4275104 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.59 | 44.0 | 3.51e-01 | 79.3% | 68.7% |
| 4494810 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.59 | 45.0 | 4.01e-01 | 81.0% | 82.5% |
| 4477176 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.59 | 44.0 | 3.89e-01 | 81.0% | 87.1% |
| 3812094 | 5.1.4.223 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd | 0.58 | 38.0 | 2.36e-01 | 100.0% | 10.7% |
| 1396826 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.57 | 43.0 | 4.21e-01 | 86.2% | 82.1% |
| 3261235 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 42.0 | 3.77e-01 | 82.8% | 63.5% |
| 3425088 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.52 | 39.0 | 3.80e-01 | 93.1% | 72.3% |