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MH884512.1__AZS49248.1__BpsS140_00055__00055
Bact-VirMH884512.1__AZS49248.1__BpsS140_00055__00055
Identity
- Accession:
- MH884512 ↗
- Kingdom:
- phage
Quality
87.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-54
Domain cluster:
representative
CATH (91)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7npaA02 | 3.30.70.3340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 56.0 | 4.87e-01 | 92.6% | 62.4% |
| 4djbA00 | 3.30.70.2870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 | 0.67 | 52.0 | 4.10e-01 | 87.0% | 54.2% |
| 1jg5A00 | 3.30.1410.10 | Alpha Beta › 2-Layer Sandwich › Gtp Cyclohydrolase I Feedback Regulatory Protein; Chain: K › GTP cyclohydrolase I feedback regulatory protein GFRP | 0.65 | 50.0 | 4.40e-01 | 85.2% | 98.8% |
| 2gukA00 | 3.30.2190.10 | Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like | 0.65 | 47.0 | 3.79e-01 | 85.2% | 38.7% |
| 4dmzA02 | 3.30.70.2880 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 53.0 | 3.98e-01 | 92.6% | 46.7% |
| 4bsjA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 48.0 | 3.79e-01 | 85.2% | 56.9% |
| 1ug8A00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.63 | 49.0 | 4.32e-01 | 88.9% | 55.2% |
| 5tvfD00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.63 | 54.0 | 3.48e-01 | 100.0% | 70.4% |
| 2lrrA00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.63 | 46.0 | 4.28e-01 | 85.2% | 61.4% |
| 2pt7G02 | 3.30.1370.180 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.63 | 46.0 | 4.37e-01 | 83.3% | 65.7% |
| 2cpmA00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.63 | 45.0 | 3.86e-01 | 85.2% | 45.7% |
| 4ezeB00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.63 | 47.0 | 3.03e-01 | 87.0% | 15.9% |
| 3rrkA03 | 3.30.70.2750 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 49.0 | 4.57e-01 | 94.4% | 73.0% |
| 3o5yB00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.62 | 51.0 | 3.88e-01 | 100.0% | 71.4% |
| 2c47A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.61 | 51.0 | 4.73e-01 | 100.0% | 94.5% |
| 3hnrA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 50.0 | 3.56e-01 | 100.0% | 89.1% |
| 7r3eB02 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.61 | 50.0 | 3.67e-01 | 96.3% | 68.1% |
| 2yweA03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.60 | 45.0 | 4.09e-01 | 87.0% | 59.8% |
| 2h00B00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 49.0 | 3.43e-01 | 100.0% | 81.0% |
| 3l9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 46.0 | 3.93e-01 | 85.2% | 65.2% |
| 2di8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 44.0 | 3.80e-01 | 85.2% | 47.9% |
| 4bfeA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 40.0 | 3.62e-01 | 81.5% | 48.1% |
| 3lvtA03 | 2.60.40.2210 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 47.0 | 3.68e-01 | 92.6% | 63.6% |
| 3hr6A02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 45.0 | 3.33e-01 | 85.2% | 33.1% |
| 2if1A00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.59 | 48.0 | 3.80e-01 | 96.3% | 42.9% |
| 6x4tA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 45.0 | 3.93e-01 | 85.2% | 56.5% |
| 1kyzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 49.0 | 3.91e-01 | 90.7% | 56.3% |
| 4k59A00 | 2.60.40.4380 | Mainly Beta › Sandwich › Immunoglobulin-like › Translational regulator CsrA | 0.59 | 44.0 | 4.23e-01 | 85.2% | 86.4% |
| 2y8yA01 | 3.30.70.1200 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 1 | 0.59 | 44.0 | 3.93e-01 | 87.0% | 72.1% |
| 3vmnA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.58 | 49.0 | 3.67e-01 | 96.3% | 84.5% |
| 3zh8C01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 48.0 | 3.93e-01 | 100.0% | 73.0% |
| 5l10B00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.58 | 49.0 | 3.55e-01 | 98.1% | 67.1% |
| 3l8dA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 48.0 | 3.38e-01 | 100.0% | 95.0% |
| 2pjdA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 46.0 | 3.44e-01 | 94.4% | 86.5% |
| 4ejoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 46.0 | 3.63e-01 | 87.0% | 49.1% |
| 3n89A02 | 3.30.310.210 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.58 | 45.0 | 3.43e-01 | 87.0% | 34.3% |
| 3r0aA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 45.0 | 3.53e-01 | 87.0% | 42.5% |
| 6wy9B02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.58 | 46.0 | 3.93e-01 | 92.6% | 83.2% |
| 1vr4E00 | 3.30.110.70 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B | 0.58 | 45.0 | 3.79e-01 | 85.2% | 74.2% |
| 2jc4A00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.57 | 46.0 | 3.13e-01 | 100.0% | 85.5% |
| 2lfvA00 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.57 | 43.0 | 3.58e-01 | 94.4% | 44.3% |
| 1dq3A04 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.57 | 46.0 | 3.77e-01 | 96.3% | 45.6% |
| 2lpuA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.57 | 45.0 | 3.40e-01 | 92.6% | 58.8% |
| 3pxpA02 | 3.30.450.180 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.57 | 49.0 | 3.36e-01 | 100.0% | 80.4% |
| 5h20A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 45.0 | 3.63e-01 | 87.0% | 54.4% |
| 3u83A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 45.0 | 3.75e-01 | 90.7% | 60.4% |
| 4ctaA02 | 3.30.70.2860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 43.0 | 3.95e-01 | 87.0% | 62.7% |
| 1zvpD00 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.56 | 47.0 | 3.67e-01 | 100.0% | 58.8% |
| 3elkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 44.0 | 3.52e-01 | 85.2% | 52.4% |
| 2wdoA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.56 | 42.0 | 3.37e-01 | 85.2% | 99.2% |
| 2w5yA01 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.56 | 45.0 | 3.46e-01 | 100.0% | 76.8% |
| 3o4oB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 44.0 | 3.63e-01 | 90.7% | 64.2% |
| 6cc0A01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.56 | 45.0 | 3.39e-01 | 100.0% | 67.1% |
| 2dchX02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.56 | 45.0 | 3.70e-01 | 96.3% | 53.2% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 40.0 | 3.80e-01 | 87.0% | 63.6% |
| 4bfiB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 43.0 | 3.77e-01 | 90.7% | 57.8% |
| 6lcqA00 | 3.30.30.10 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › Knottin, scorpion toxin-like | 0.55 | 42.0 | 4.27e-01 | 87.0% | 85.2% |
| 7n0eB02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.55 | 45.0 | 3.60e-01 | 98.1% | 76.2% |
| 6dw1A00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.55 | 44.0 | 3.11e-01 | 98.1% | 54.8% |
| 3vtiA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 40.0 | 3.46e-01 | 85.2% | 46.9% |
| 4umgA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 42.0 | 3.45e-01 | 85.2% | 52.0% |
| 5i2cB01 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.54 | 44.0 | 3.36e-01 | 98.1% | 80.1% |
| 2lxfA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 42.0 | 3.36e-01 | 87.0% | 38.8% |
| 4fvaC00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.54 | 43.0 | 2.84e-01 | 90.7% | 28.3% |
| 1zhvA00 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.54 | 45.0 | 3.53e-01 | 100.0% | 56.7% |
| 2x3gA00 | 3.30.70.1910 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 40.0 | 3.34e-01 | 87.0% | 50.0% |
| 5axgA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 45.0 | 3.49e-01 | 96.3% | 82.5% |
| 3v8oA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 41.0 | 3.48e-01 | 87.0% | 47.4% |
| 5tkwA01 | 3.30.420.380 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.54 | 41.0 | 3.04e-01 | 88.9% | 92.4% |
| 2avxA00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.54 | 43.0 | 3.21e-01 | 98.1% | 66.1% |
| 3hz7A00 | 3.30.110.40 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain | 0.54 | 45.0 | 4.14e-01 | 98.1% | 95.9% |
| 2cpjA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 40.0 | 3.45e-01 | 88.9% | 47.5% |
| 4i68A00 | 3.30.70.1800 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 42.0 | 3.71e-01 | 98.1% | 56.7% |
| 4za1C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 41.0 | 3.48e-01 | 85.2% | 58.7% |
| 4i0kA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 41.0 | 3.57e-01 | 90.7% | 60.0% |
| 4pg4B03 | 3.30.70.3100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 40.0 | 3.67e-01 | 85.2% | 61.3% |
| 3cx5A01 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.53 | 42.0 | 3.04e-01 | 98.1% | 35.1% |
| 2anrA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.53 | 42.0 | 3.86e-01 | 92.6% | 70.7% |
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 39.0 | 3.53e-01 | 88.9% | 54.1% |
| 6d6tA01 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.52 | 42.0 | 2.97e-01 | 98.1% | 53.8% |
| 1lxjA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 40.0 | 3.28e-01 | 85.2% | 44.7% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 38.0 | 3.24e-01 | 85.2% | 52.4% |
| 3ossD00 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.51 | 41.0 | 3.18e-01 | 100.0% | 88.5% |
| 3jamD02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.51 | 42.0 | 3.31e-01 | 100.0% | 52.6% |
| 1urrA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 36.0 | 3.18e-01 | 85.2% | 45.4% |
| 1k3sA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.51 | 42.0 | 3.52e-01 | 100.0% | 58.3% |
| 2pcrA02 | 3.40.190.80 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › | 0.51 | 43.0 | 3.49e-01 | 100.0% | 67.0% |
| 1ywhA01 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.51 | 36.0 | 3.25e-01 | 77.8% | 54.3% |
| 4durB01 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.51 | 42.0 | 3.78e-01 | 100.0% | 65.4% |
| 4lrzE02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 39.0 | 3.34e-01 | 87.0% | 95.7% |
| 4ofyD02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 41.0 | 3.43e-01 | 98.1% | 60.7% |
ECOD (93)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3410614 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.76 | 57.0 | 4.55e-01 | 87.0% | 41.9% |
| 3651332 | 872.4.1.2 ↗ | a+b two layers › Dodecin subunit-like › YdgH-like › YdgH-like › Helitron_like_N | 0.70 | 54.0 | 4.34e-01 | 85.2% | 69.1% |
| 3602232 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.68 | 52.0 | 3.95e-01 | 85.2% | 34.1% |
| 3743748 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 51.0 | 4.37e-01 | 87.0% | 50.0% |
| 4993809 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.67 | 53.0 | 4.41e-01 | 90.7% | 49.0% |
| 4601283 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.66 | 51.0 | 4.16e-01 | 88.9% | 44.5% |
| 4957337 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.66 | 49.0 | 4.34e-01 | 85.2% | 67.1% |
| 3429592 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.65 | 50.0 | 4.59e-01 | 87.0% | 64.0% |
| 3611404 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.65 | 50.0 | 4.25e-01 | 87.0% | 49.5% |
| 3700379 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.65 | 50.0 | 3.66e-01 | 85.2% | 57.5% |
| 3609798 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.65 | 50.0 | 3.95e-01 | 87.0% | 40.0% |
| 3386674 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.65 | 54.0 | 4.88e-01 | 94.4% | 68.0% |
| 5061295 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.65 | 48.0 | 4.42e-01 | 85.2% | 60.0% |
| 3210600 | 327.11.2.41 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF26657 | 0.65 | 52.0 | 4.76e-01 | 87.0% | 77.1% |
| 3247165 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.64 | 52.0 | 4.53e-01 | 100.0% | 56.7% |
| 4943245 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.64 | 51.0 | 3.90e-01 | 90.7% | 36.9% |
| 5048181 | 101.1.2.819 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27231 | 0.64 | 52.0 | 3.66e-01 | 88.9% | 47.1% |
| 3170274 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.64 | 47.0 | 4.03e-01 | 87.0% | 47.8% |
| 3478525 | 320.1.1.7 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › PUS7L_N | 0.64 | 49.0 | 4.46e-01 | 87.0% | 61.3% |
| 4523274 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.64 | 49.0 | 3.41e-01 | 87.0% | 25.1% |
| 3628325 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.64 | 50.0 | 4.72e-01 | 87.0% | 70.8% |
| 5616 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.63 | 49.0 | 4.32e-01 | 88.9% | 55.2% |
| 5077993 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.63 | 45.0 | 3.96e-01 | 85.2% | 49.4% |
| 3581967 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.63 | 46.0 | 4.43e-01 | 87.0% | 66.2% |
| 4265078 | 304.14.1.0 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) | 0.63 | 50.0 | 4.56e-01 | 88.9% | 73.3% |
| 4228350 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.63 | 46.0 | 4.39e-01 | 87.0% | 66.2% |
| 5048696 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 48.0 | 3.44e-01 | 87.0% | 27.1% |
| 3711102 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.63 | 46.0 | 3.80e-01 | 87.0% | 43.0% |
| 3548774 | 4012.4.1.1 ↗ | a+b two layers › SSHS domain › DPAGT1 insertion domain › DPAGT1 insertion domain › DPAGT1_ins | 0.63 | 48.0 | 5.11e-01 | 87.0% | 100.0% |
| 4134039 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.62 | 47.0 | 4.33e-01 | 87.0% | 61.3% |
| 3403645 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.62 | 46.0 | 4.47e-01 | 87.0% | 71.7% |
| 3595328 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.62 | 45.0 | 3.72e-01 | 87.0% | 41.0% |
| 3219151 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.62 | 47.0 | 3.19e-01 | 81.5% | 36.0% |
| 3476902 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 48.0 | 3.54e-01 | 85.2% | 42.1% |
| 5010185 | 328.5.1.0 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like | 0.62 | 45.0 | 4.19e-01 | 85.2% | 61.4% |
| 3307802 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.62 | 49.0 | 4.28e-01 | 92.6% | 60.2% |
| 3956508 | 304.162.1.0 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain | 0.61 | 47.0 | 4.20e-01 | 87.0% | 62.5% |
| 3598932 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.61 | 47.0 | 3.91e-01 | 88.9% | 45.7% |
| 3218484 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.61 | 44.0 | 4.13e-01 | 87.0% | 61.4% |
| 4500961 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.60 | 47.0 | 4.20e-01 | 92.6% | 68.2% |
| 3333203 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.60 | 43.0 | 3.51e-01 | 87.0% | 38.3% |
| 4979624 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.60 | 50.0 | 4.08e-01 | 98.1% | 50.9% |
| 3887429 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 51.0 | 3.80e-01 | 98.1% | 66.9% |
| 3950275 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.60 | 48.0 | 4.24e-01 | 92.6% | 67.1% |
| 4311488 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.59 | 45.0 | 4.09e-01 | 87.0% | 61.3% |
| 3837675 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.59 | 43.0 | 3.24e-01 | 90.7% | 29.3% |
| 4162842 | 387.1.5.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like | 0.59 | 46.0 | 4.73e-01 | 87.0% | 92.0% |
| 3829584 | 387.1.5.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like | 0.59 | 41.0 | 4.38e-01 | 85.2% | 91.1% |
| 5042101 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.59 | 45.0 | 4.29e-01 | 98.1% | 70.0% |
| 4138721 | 101.1.9.20 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › PhetRS_B1 | 0.59 | 46.0 | 4.19e-01 | 87.0% | 68.0% |
| 4936751 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.59 | 47.0 | 3.52e-01 | 98.1% | 37.8% |
| 3823393 | 320.1.1.3 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › YlmH_1st | 0.58 | 45.0 | 4.08e-01 | 85.2% | 61.3% |
| 3972097 | 304.14.1.0 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) | 0.58 | 42.0 | 3.93e-01 | 88.9% | 60.0% |
| 3969285 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.58 | 51.0 | 4.39e-01 | 100.0% | 72.9% |
| 4140750 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.57 | 48.0 | 3.64e-01 | 98.1% | 52.4% |
| 4003644 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.57 | 45.0 | 3.31e-01 | 92.6% | 69.1% |
| 5026329 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 44.0 | 4.32e-01 | 85.2% | 80.0% |
| 3473575 | 327.11.2.27 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_Vigilin | 0.57 | 44.0 | 3.91e-01 | 85.2% | 78.8% |
| 1907312 | 223.1.1.7 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind | 0.57 | 48.0 | 3.47e-01 | 98.1% | 66.3% |
| 5011923 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.57 | 44.0 | 2.75e-01 | 87.0% | 25.5% |
| 151264 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.57 | 43.0 | 3.75e-01 | 94.4% | 51.6% |
| 4230863 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.57 | 46.0 | 3.80e-01 | 96.3% | 47.3% |
| 4975750 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.57 | 46.0 | 4.12e-01 | 94.4% | 93.8% |
| 3272707 | 327.11.2.39 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_PARP14_3 | 0.57 | 41.0 | 3.91e-01 | 87.0% | 66.2% |
| 4932468 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.57 | 42.0 | 3.71e-01 | 87.0% | 52.9% |
| 4188535 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.57 | 42.0 | 3.79e-01 | 87.0% | 56.2% |
| 3388222 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.56 | 42.0 | 3.93e-01 | 87.0% | 69.3% |
| 5051275 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.56 | 42.0 | 3.90e-01 | 87.0% | 68.0% |
| 3267853 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.56 | 42.0 | 2.80e-01 | 81.5% | 30.5% |
| 4112187 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.56 | 41.0 | 3.84e-01 | 87.0% | 62.9% |
| 3290210 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.56 | 45.0 | 3.54e-01 | 98.1% | 47.0% |
| 3816888 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.56 | 40.0 | 3.76e-01 | 87.0% | 61.4% |
| 5015450 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.55 | 43.0 | 3.83e-01 | 87.0% | 58.7% |
| 3800814 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.55 | 47.0 | 3.07e-01 | 98.1% | 38.4% |
| 5007423 | 2.1.1.95 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Lig_C | 0.55 | 43.0 | 3.40e-01 | 90.7% | 44.8% |
| 3805546 | 101.1.2.24 ↗ | alpha arrays › HTH › HTH › winged helix domain › MAGE | 0.55 | 44.0 | 3.51e-01 | 90.7% | 53.9% |
| 4250326 | 328.5.1.5 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › AnfO_nitrog | 0.55 | 46.0 | 4.13e-01 | 98.1% | 96.2% |
| 3960673 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.55 | 44.0 | 4.22e-01 | 90.7% | 87.7% |
| 5013819 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.55 | 42.0 | 4.05e-01 | 98.1% | 75.4% |
| 3580266 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.55 | 38.0 | 3.71e-01 | 77.8% | 76.9% |
| 4146398 | 223.1.1.7 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind | 0.55 | 45.0 | 3.33e-01 | 100.0% | 74.7% |
| 3915000 | 327.11.2.20 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › BICC1_KH | 0.54 | 39.0 | 3.71e-01 | 83.3% | 62.9% |
| 4938054 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.54 | 42.0 | 3.84e-01 | 92.6% | 66.3% |
| 3578641 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.54 | 39.0 | 3.67e-01 | 85.2% | 62.9% |
| 3603204 | 304.110.1.1 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Acylphosphatase | 0.54 | 40.0 | 3.85e-01 | 87.0% | 72.3% |
| 5043867 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.54 | 44.0 | 4.00e-01 | 94.4% | 69.3% |
| 4619882 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.53 | 43.0 | 3.94e-01 | 100.0% | 67.5% |
| 5054678 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.53 | 44.0 | 4.08e-01 | 100.0% | 72.0% |
| 4001363 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.53 | 43.0 | 3.37e-01 | 100.0% | 45.2% |
| 3228509 | 101.1.4.12 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › MSC | 0.52 | 41.0 | 3.18e-01 | 92.6% | 44.4% |
| 3706937 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.51 | 38.0 | 3.88e-01 | 87.0% | 88.7% |
| 2553387 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.51 | 39.0 | 3.58e-01 | 94.4% | 69.4% |
| 3211790 | 327.11.2.27 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_Vigilin | 0.51 | 38.0 | 3.57e-01 | 87.0% | 74.7% |
D2
medium
residues 111-161
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2uv8A07 | 6.10.140.1410 | Special › Helix non-globular › Helix Hairpins › | 0.82 | 73.0 | 6.15e-01 | 100.0% | 60.0% |
| 2vkzA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.82 | 73.0 | 4.57e-01 | 100.0% | 19.5% |
| 2e9xA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.82 | 65.0 | 4.71e-01 | 84.3% | 39.1% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.77 | 67.0 | 5.90e-01 | 100.0% | 70.1% |
| 3txsC01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.76 | 67.0 | 5.90e-01 | 100.0% | 82.7% |
| 3vm9A02 | 6.10.140.2110 | Special › Helix non-globular › Helix Hairpins › | 0.74 | 57.0 | 5.57e-01 | 88.2% | 77.2% |
| 2yqyA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.74 | 63.0 | 4.79e-01 | 98.0% | 76.2% |
| 5h5mA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.72 | 60.0 | 4.63e-01 | 100.0% | 43.1% |
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.72 | 62.0 | 4.62e-01 | 100.0% | 43.6% |
| 2xkoC02 | 6.10.250.870 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.72 | 49.0 | 5.42e-01 | 80.4% | 100.0% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.71 | 63.0 | 5.23e-01 | 100.0% | 90.0% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 64.0 | 5.24e-01 | 100.0% | 57.1% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 62.0 | 4.25e-01 | 100.0% | 29.6% |
| 3wfwA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.71 | 56.0 | 4.15e-01 | 88.2% | 34.1% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 57.0 | 5.42e-01 | 98.0% | 75.8% |
| 2e62A01 | 6.10.140.420 | Special › Helix non-globular › Helix Hairpins › | 0.70 | 56.0 | 5.58e-01 | 92.2% | 100.0% |
| 1b3qA01 | 1.10.287.560 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Histidine kinase CheA-like, homodimeric domain | 0.70 | 60.0 | 5.74e-01 | 100.0% | 85.5% |
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 60.0 | 5.39e-01 | 98.0% | 78.1% |
| 3fxdB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 58.0 | 5.60e-01 | 100.0% | 84.5% |
| 4fvmA06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.69 | 56.0 | 5.73e-01 | 90.2% | 97.9% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 61.0 | 5.45e-01 | 100.0% | 76.1% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.69 | 56.0 | 5.39e-01 | 92.2% | 84.5% |
| 3b0cW00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.68 | 57.0 | 5.00e-01 | 100.0% | 63.0% |
| 2gtaA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.66 | 55.0 | 4.51e-01 | 94.1% | 49.5% |
| 1uajA02 | 1.10.1270.20 | Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › tRNA(m1g37)methyltransferase, domain 2 | 0.66 | 46.0 | 4.06e-01 | 80.4% | 50.7% |
| 4heoA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.66 | 44.0 | 4.35e-01 | 76.5% | 65.5% |
| 3bbzA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.66 | 42.0 | 4.37e-01 | 70.6% | 70.8% |
| 1qguB04 | 1.20.89.10 | Mainly Alpha › Up-down Bundle › Nitrogenase Molybdenum-iron Protein, subunit B; domain 4 › Nitrogenase Molybdenum-iron Protein, subunit B, domain 4 | 0.66 | 52.0 | 4.42e-01 | 86.3% | 95.2% |
| 4cc9B00 | 1.20.5.4730 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.64 | 48.0 | 3.93e-01 | 82.4% | 42.9% |
| 2blfB01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.62 | 45.0 | 4.25e-01 | 78.4% | 63.5% |
| 2e5yA02 | 1.20.5.440 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain | 0.61 | 44.0 | 4.67e-01 | 78.4% | 91.1% |
| 3q9oA02 | 3.90.1350.10 | Alpha Beta › Alpha-Beta Complex › Exotoxin A, middle domain › Exotoxin A, middle domain | 0.53 | 46.0 | 3.22e-01 | 100.0% | 30.5% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3214018 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.88 | 79.0 | 6.37e-01 | 100.0% | 53.7% |
| 3372032 | 5028.1.1.0 ↗ | extended segments › Sec-beta subunit › Sec-beta subunit › Sec-beta subunit | 0.87 | 69.0 | 6.78e-01 | 86.3% | 85.5% |
| 5081330 | 4163.1.1.0 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like | 0.84 | 61.0 | 4.38e-01 | 94.1% | 28.9% |
| 3255713 | 605.4.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein | 0.83 | 61.0 | 6.38e-01 | 78.4% | 88.9% |
| 3958634 | 5067.1.1.4 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › MMPL | 0.83 | 72.0 | 4.69e-01 | 100.0% | 24.0% |
| 4683095 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.80 | 71.0 | 6.10e-01 | 98.0% | 81.2% |
| 3756047 | 192.29.1.243 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Fy-3 | 0.79 | 68.0 | 5.71e-01 | 100.0% | 56.7% |
| 5041271 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.79 | 69.0 | 6.11e-01 | 100.0% | 90.7% |
| 3414399 | 5086.1.1.106 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF725 | 0.78 | 67.0 | 4.67e-01 | 100.0% | 62.4% |
| 3626374 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.78 | 71.0 | 5.77e-01 | 100.0% | 72.2% |
| 4547274 | 3714.1.1.0 ↗ | a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain | 0.78 | 67.0 | 5.44e-01 | 100.0% | 51.0% |
| 4506665 | 3978.1.1.1 ↗ | alpha complex topology › Integral membrane Acyl-CoA desaturase › Integral membrane Acyl-CoA desaturase › Integral membrane Acyl-CoA desaturase › FA_desaturase | 0.77 | 68.0 | 4.04e-01 | 100.0% | 14.6% |
| 3320255 | 605.3.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Nonstructural protein ns2, Nep, M1-binding domain › Nonstructural protein ns2, Nep, M1-binding domain | 0.77 | 65.0 | 6.57e-01 | 92.2% | 100.0% |
| 5040661 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.76 | 65.0 | 5.92e-01 | 100.0% | 80.0% |
| 4649366 | 304.58.1.0 ↗ | a+b two layers › Alpha-beta plaits › FepE-like › FepE-like | 0.75 | 66.0 | 4.14e-01 | 100.0% | 19.6% |
| 3491310 | 3826.1.1.67 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Med10 | 0.75 | 59.0 | 5.19e-01 | 92.2% | 58.7% |
| 3965346 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.75 | 60.0 | 3.95e-01 | 92.2% | 21.3% |
| 3943184 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.74 | 63.0 | 5.75e-01 | 100.0% | 78.6% |
| 3963355 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.73 | 61.0 | 5.53e-01 | 100.0% | 80.0% |
| 5044800 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.73 | 62.0 | 5.44e-01 | 100.0% | 68.8% |
| 3610787 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.72 | 65.0 | 3.82e-01 | 100.0% | 30.5% |
| 3489330 | 7023.1.1.0 ↗ | alpha bundles › helical ridge domain of D-alanyl transfer protein › helical ridge domain of D-alanyl transfer protein › helical ridge domain of D-alanyl transfer protein | 0.72 | 59.0 | 4.66e-01 | 96.1% | 45.2% |
| 3993051 | 7023.1.1.0 ↗ | alpha bundles › helical ridge domain of D-alanyl transfer protein › helical ridge domain of D-alanyl transfer protein › helical ridge domain of D-alanyl transfer protein | 0.71 | 57.0 | 4.48e-01 | 90.2% | 81.8% |
| 4103296 | 3646.1.1.1 ↗ | alpha complex topology › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › CbiQ | 0.70 | 61.0 | 4.03e-01 | 100.0% | 22.7% |
| 3196270 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.70 | 60.0 | 4.69e-01 | 100.0% | 44.3% |
| 3186617 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.70 | 59.0 | 3.64e-01 | 100.0% | 16.4% |
| 3980428 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.68 | 56.0 | 5.10e-01 | 100.0% | 76.0% |
| 4929363 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.67 | 55.0 | 4.40e-01 | 100.0% | 44.3% |
| 3800210 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.64 | 51.0 | 4.87e-01 | 100.0% | 80.0% |
| 3838608 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.62 | 51.0 | 4.84e-01 | 100.0% | 81.5% |
| 3245965 | 5071.1.1.0 ↗ | alpha bundles › cytochrome bc1 complex 11 kDa protein-like › Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 0.61 | 41.0 | 4.07e-01 | 84.3% | 64.8% |
| 3690556 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.60 | 51.0 | 4.79e-01 | 92.2% | 80.0% |
| 3585303 | 568.1.1.0 ↗ | few secondary structure elements › p8-MTCP1-related › p8-MTCP1-related › p8-MTCP1-related | 0.55 | 39.0 | 3.69e-01 | 82.4% | 63.1% |