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MH884513.1__AYP68711.1__BpsS36_00005__00005
Bact-VirMH884513.1__AYP68711.1__BpsS36_00005__00005
Identity
- Accession:
- MH884513 ↗
- Kingdom:
- phage
Quality
88.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Ehrlichviridae›
Nairobivirus›
Bacillus_phage_vB_BpsS-36
TaxID: 2419622
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 207-279
Domain cluster:
representative
D2
high
residues 357-421
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1txdA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 44.0 | 3.62e-01 | 73.8% | 42.1% |
| 2uvaG01 | 1.20.1050.120 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.62 | 49.0 | 4.00e-01 | 90.8% | 63.2% |
| 5w0kA01 | 3.90.380.20 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Herpesvirus glycoprotein H, domain D-II | 0.61 | 44.0 | 2.85e-01 | 78.5% | 63.7% |
| 2jmkA00 | 3.30.420.600 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Thermoplasma acidophilum protein TA0956 | 0.60 | 45.0 | 3.86e-01 | 89.2% | 48.2% |
| 1g29102 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 38.0 | 4.25e-01 | 87.7% | 93.3% |
| 1jyoE00 | 4.10.1330.10 | Few Secondary Structures › Irregular › non globular Virulence effector SptP fold › non globular Virulence effector SptP domain | 0.58 | 31.0 | 2.75e-01 | 84.6% | 31.4% |
| 2kigA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.58 | 44.0 | 3.37e-01 | 83.1% | 42.2% |
| 1mhyD00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.58 | 45.0 | 2.74e-01 | 89.2% | 26.1% |
| 2c9oB02 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.57 | 44.0 | 3.73e-01 | 86.2% | 78.8% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.56 | 47.0 | 3.95e-01 | 98.5% | 73.3% |
| 2kgsA01 | 3.40.1520.20 | Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1634 › | 0.56 | 41.0 | 3.61e-01 | 83.1% | 96.4% |
| 2jl8102 | 3.30.160.850 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 36.0 | 4.03e-01 | 75.4% | 100.0% |
| 5x6vG00 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.55 | 38.0 | 3.17e-01 | 75.4% | 40.2% |
| 4ntqB00 | 3.30.2450.20 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.54 | 45.0 | 3.63e-01 | 100.0% | 51.7% |
| 3a54A01 | 2.40.50.340 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 41.0 | 3.79e-01 | 89.2% | 68.9% |
| 3p0cA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.53 | 45.0 | 3.85e-01 | 100.0% | 91.9% |
| 1p9rA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.52 | 37.0 | 3.19e-01 | 75.4% | 56.8% |
| 1dkqA02 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.52 | 37.0 | 3.07e-01 | 75.4% | 72.6% |
| 2z86D02 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.52 | 43.0 | 3.01e-01 | 100.0% | 59.2% |
| 4oxwA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.52 | 45.0 | 3.90e-01 | 100.0% | 99.1% |
| 4on1A01 | 2.40.128.470 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 41.0 | 3.31e-01 | 89.2% | 91.4% |
| 4hasA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.52 | 42.0 | 3.69e-01 | 93.8% | 92.3% |
| 2zihC00 | 1.10.3630.10 | Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like | 0.52 | 45.0 | 2.99e-01 | 100.0% | 95.0% |
| 2j01100 | 2.30.170.40 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L28/L24 | 0.51 | 36.0 | 3.34e-01 | 80.0% | 55.7% |
| 4p2iA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.51 | 41.0 | 3.57e-01 | 96.9% | 92.3% |
| 3oduB01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.51 | 43.0 | 2.86e-01 | 96.9% | 32.1% |
| 2i5bA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.50 | 41.0 | 2.85e-01 | 98.5% | 34.6% |
| 1z2aA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 36.0 | 2.75e-01 | 76.9% | 51.8% |
| 2lruA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.50 | 39.0 | 3.46e-01 | 86.2% | 70.4% |
| 4zudA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.50 | 38.0 | 2.70e-01 | 89.2% | 45.7% |
| 5b55A01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 38.0 | 2.73e-01 | 81.5% | 83.2% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4293536 | 4232.1.1.0 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 | 0.67 | 40.0 | 4.39e-01 | 83.1% | 76.0% |
| 4093115 | 3877.1.1.1 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP | 0.66 | 44.0 | 3.02e-01 | 84.6% | 19.2% |
| 3723226 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.65 | 52.0 | 4.17e-01 | 89.2% | 87.4% |
| 3586911 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.61 | 44.0 | 3.95e-01 | 78.5% | 88.4% |
| 5042930 | 3563.1.1.1 ↗ | alpha bundles › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › TatC | 0.60 | 44.0 | 3.03e-01 | 80.0% | 76.6% |
| 4983992 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.59 | 39.0 | 2.98e-01 | 87.7% | 27.7% |
| 3204533 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.59 | 34.0 | 3.25e-01 | 93.8% | 45.3% |
| 3240661 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 40.0 | 2.84e-01 | 70.8% | 46.4% |
| 4204480 | 3326.1.1.1 ↗ | alpha arrays › DNA-binding domain in UvrA › DNA-binding domain in UvrA › DNA-binding domain in UvrA › UvrA_DNA-bind | 0.59 | 43.0 | 3.60e-01 | 76.9% | 76.5% |
| 4953898 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.59 | 40.0 | 3.26e-01 | 87.7% | 36.8% |
| 4091699 | 857.1.1.1 ↗ | a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › ZapA | 0.59 | 43.0 | 3.83e-01 | 80.0% | 67.0% |
| 4930470 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.58 | 40.0 | 3.69e-01 | 87.7% | 55.3% |
| 4434271 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.58 | 39.0 | 3.22e-01 | 87.7% | 36.8% |
| 147620 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.58 | 41.0 | 3.65e-01 | 75.4% | 55.7% |
| 3591633 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.58 | 48.0 | 4.20e-01 | 100.0% | 98.2% |
| 2516752 | 2.1.1.32 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TIP49 | 0.57 | 39.0 | 4.11e-01 | 87.7% | 81.0% |
| 3251443 | 4026.1.1.0 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) | 0.57 | 46.0 | 3.80e-01 | 92.3% | 100.0% |
| 4959982 | 3110.1.1.0 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain | 0.56 | 48.0 | 3.49e-01 | 100.0% | 94.6% |
| 3714703 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.56 | 47.0 | 4.20e-01 | 100.0% | 97.0% |
| 3704298 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.56 | 47.0 | 4.02e-01 | 100.0% | 76.5% |
| 3364063 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.56 | 47.0 | 3.70e-01 | 96.9% | 44.3% |
| 3276465 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.56 | 43.0 | 3.22e-01 | 92.3% | 82.0% |
| 5016920 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.55 | 38.0 | 3.62e-01 | 87.7% | 60.3% |
| 3164102 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.55 | 37.0 | 4.05e-01 | 75.4% | 100.0% |
| 3262159 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.55 | 45.0 | 3.78e-01 | 100.0% | 85.4% |
| 3173646 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.54 | 45.0 | 3.48e-01 | 100.0% | 73.3% |
| 1309460 | 3338.1.1.1 ↗ | a+b two layers › Fragilysin-3 prodomain-like › Fragilysin-3 prodomain › Fragilysin-3 prodomain › fragilysinNterm | 0.53 | 41.0 | 3.26e-01 | 86.2% | 88.1% |
| 3783181 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.53 | 44.0 | 3.79e-01 | 96.9% | 91.8% |
| 4144799 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.52 | 43.0 | 4.25e-01 | 92.3% | 90.0% |
| 3989004 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.52 | 36.0 | 2.41e-01 | 72.3% | 29.7% |
| 4023312 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.52 | 42.0 | 3.58e-01 | 96.9% | 96.0% |
| 3260099 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 43.0 | 3.99e-01 | 100.0% | 70.0% |
| 3514664 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.52 | 39.0 | 3.73e-01 | 90.8% | 68.8% |
| 3698212 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.51 | 43.0 | 2.80e-01 | 100.0% | 68.0% |
| 3779545 | 109.4.1.816 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RALGAPB_N | 0.51 | 43.0 | 2.72e-01 | 100.0% | 34.0% |
| 4027440 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.50 | 39.0 | 3.42e-01 | 92.3% | 87.3% |
D3
medium
residues 1-63
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1n5uA05 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.65 | 48.0 | 4.03e-01 | 81.0% | 45.5% |
| 1luwA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.64 | 47.0 | 4.77e-01 | 79.4% | 81.2% |
| 4uskA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.63 | 47.0 | 3.54e-01 | 79.4% | 40.9% |
| 4i1mB01 | 1.20.120.1700 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.60 | 46.0 | 3.68e-01 | 84.1% | 55.8% |
| 4g6dB02 | 6.10.140.1800 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 45.0 | 4.25e-01 | 96.8% | 88.9% |
D4
medium
residues 64-194
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wzkA03 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.74 | 38.0 | 4.10e-01 | 81.7% | 58.2% |
| 3l9fA02 | 6.10.140.1570 | Special › Helix non-globular › Helix Hairpins › | 0.67 | 32.0 | 3.99e-01 | 74.0% | 72.8% |
| 4fwvA02 | 1.20.120.1680 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.67 | 50.0 | 5.02e-01 | 77.9% | 80.6% |
| 6vudA01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.65 | 41.0 | 4.44e-01 | 84.7% | 75.2% |
| 3v9rB00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.64 | 33.0 | 4.33e-01 | 87.0% | 90.3% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.63 | 33.0 | 3.14e-01 | 91.6% | 44.0% |
| 1t72A02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.59 | 33.0 | 3.71e-01 | 83.2% | 71.4% |
| 4kb2A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.57 | 38.0 | 4.16e-01 | 91.6% | 81.7% |
| 6lumD01 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.57 | 31.0 | 3.17e-01 | 80.2% | 52.8% |
| 6z4xA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.55 | 33.0 | 3.12e-01 | 86.3% | 48.4% |
| 3ed5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.54 | 28.0 | 3.46e-01 | 94.7% | 76.2% |
| 2oduA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 32.0 | 3.47e-01 | 86.3% | 70.5% |
| 3ktdD02 | 1.10.3660.10 | Mainly Alpha › Orthogonal Bundle › 6-phosphogluconate dehydrogenase C-terminal fold › 6-phosphogluconate dehydrogenase C-terminal like domain | 0.52 | 32.0 | 3.52e-01 | 100.0% | 74.3% |
| 8ipqB01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.52 | 46.0 | 3.58e-01 | 97.7% | 45.9% |
| 4dylA02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.52 | 35.0 | 4.06e-01 | 82.4% | 95.7% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.51 | 35.0 | 3.78e-01 | 97.7% | 83.6% |
| 3sjrA00 | 1.10.132.90 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.51 | 35.0 | 3.62e-01 | 86.3% | 73.8% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3946757 | 601.19.1.3 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Phage_Mu_F | 0.73 | 62.0 | 5.16e-01 | 100.0% | 53.3% |
| 5068099 | 5076.2.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ | 0.63 | 44.0 | 3.68e-01 | 93.1% | 43.3% |
| 3696717 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.58 | 47.0 | 4.18e-01 | 86.3% | 64.7% |
| 3516129 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.58 | 37.0 | 4.12e-01 | 82.4% | 81.0% |
| 3919843 | 604.1.1.124 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_6 | 0.57 | 37.0 | 3.77e-01 | 80.2% | 65.4% |
| 3989138 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.56 | 46.0 | 3.96e-01 | 89.3% | 60.0% |
| 3782089 | 1065.1.1.0 ↗ | alpha bundles › SPX domain › SPX domain › SPX domain | 0.56 | 41.0 | 3.80e-01 | 86.3% | 60.6% |
| 3190578 | 1065.1.1.1 ↗ | alpha bundles › SPX domain › SPX domain › SPX domain › SPX | 0.54 | 38.0 | 3.97e-01 | 83.2% | 76.8% |
| 4995295 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.54 | 47.0 | 3.96e-01 | 96.9% | 56.4% |
| 3319283 | 601.2.1.5 ↗ | alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes › Ctr | 0.53 | 33.0 | 3.35e-01 | 80.9% | 60.0% |
| 3770414 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.53 | 36.0 | 3.93e-01 | 86.3% | 85.7% |
| 3447097 | 603.1.1.99 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27021 | 0.53 | 35.0 | 3.78e-01 | 83.2% | 79.1% |
| 3654060 | 3722.1.1.1 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › MAP65_ASE1 | 0.52 | 37.0 | 3.07e-01 | 80.2% | 41.5% |
| 5021831 | 7094.1.1.0 ↗ | alpha bundles › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin | 0.52 | 33.0 | 3.83e-01 | 75.6% | 91.1% |
| 3930836 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.51 | 33.0 | 3.51e-01 | 83.2% | 71.7% |
| 3522521 | 5086.1.1.90 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › V_ATPase_I | 0.50 | 39.0 | 3.84e-01 | 99.2% | 75.7% |
| 3600606 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.50 | 39.0 | 3.53e-01 | 81.7% | 93.7% |
| 3978264 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.50 | 40.0 | 3.90e-01 | 96.9% | 75.3% |
D5
medium
residues 296-343
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6cxtB01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.75 | 63.0 | 4.91e-01 | 100.0% | 74.1% |
| 3eslA02 | 1.25.40.930 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.70 | 59.0 | 4.53e-01 | 100.0% | 55.5% |
| 4dtdA02 | 1.10.3680.20 | Mainly Alpha › Orthogonal Bundle › TerB-like › Actin cross-linking domain | 0.70 | 53.0 | 3.93e-01 | 87.5% | 65.0% |
| 1mkmA03 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.70 | 55.0 | 3.70e-01 | 85.4% | 87.2% |
| 4irnA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.69 | 58.0 | 4.50e-01 | 100.0% | 74.8% |
| 2kz5A00 | 1.10.880.10 | Mainly Alpha › Orthogonal Bundle › Transcription Factor Skn-1; Chain P › Transcription factor, Skn-1-like, DNA-binding domain | 0.69 | 54.0 | 4.40e-01 | 87.5% | 50.5% |
| 3hjlA02 | 1.10.220.30 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Flagellar motor switch protein FliG, alpha-alpha superhelical domain | 0.67 | 55.0 | 4.36e-01 | 95.8% | 50.9% |
| 2ouxA01 | 1.25.60.10 | Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like | 0.65 | 51.0 | 3.89e-01 | 91.7% | 43.8% |
| 5ow2A00 | 1.10.10.930 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.63 | 55.0 | 4.80e-01 | 100.0% | 78.1% |
| 4c6rA00 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.60 | 50.0 | 3.52e-01 | 95.8% | 50.0% |
| 3he0B00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 51.0 | 3.45e-01 | 100.0% | 59.0% |
| 4pf6A00 | 3.40.190.170 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 | 0.58 | 50.0 | 3.05e-01 | 95.8% | 82.3% |
| 3beyD00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.57 | 45.0 | 3.82e-01 | 100.0% | 68.1% |
| 2a6hC03 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.54 | 38.0 | 2.69e-01 | 79.2% | 27.8% |
| 3ez0C00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.53 | 47.0 | 3.08e-01 | 100.0% | 95.7% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5071598 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.73 | 62.0 | 4.40e-01 | 95.8% | 60.0% |
| 3471677 | 137.1.1.1 ↗ | alpha bundles › A DNA-binding domain in eukaryotic transcription factors › A DNA-binding domain in eukaryotic transcription factors › A DNA-binding domain in eukaryotic transcription factors › bZIP_Maf | 0.71 | 57.0 | 4.85e-01 | 89.6% | 57.5% |
| 4386712 | 218.3.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Prokaryotic ribosomal protein L17 › Prokaryotic ribosomal protein L17 › Ribosomal_L17 | 0.71 | 52.0 | 3.96e-01 | 87.5% | 33.0% |
| 5000596 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.70 | 54.0 | 3.56e-01 | 87.5% | 29.9% |
| 3204657 | 218.3.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Prokaryotic ribosomal protein L17 › Prokaryotic ribosomal protein L17 › Ribosomal_L17 | 0.70 | 51.0 | 3.51e-01 | 87.5% | 22.4% |
| 3248387 | 218.3.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Prokaryotic ribosomal protein L17 › Prokaryotic ribosomal protein L17 › Ribosomal_L17 | 0.70 | 51.0 | 3.79e-01 | 87.5% | 30.4% |
| 3707438 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.70 | 59.0 | 3.47e-01 | 100.0% | 21.6% |
| 4390259 | 531.2.1.4 ↗ | alpha arrays › Domains of FliG › Middle domain of FliG › Middle domain of FliG › FliG_C, FliG_M, FliG_N | 0.68 | 55.0 | 3.38e-01 | 93.8% | 17.8% |
| 4669284 | 531.1.1.3 ↗ | alpha arrays › Domains of FliG › C-terminal domain of FliG › C-terminal domain of FliG › FliG_C, FliG_M | 0.67 | 53.0 | 3.55e-01 | 93.8% | 27.0% |
| 4046955 | 531.2.1.1 ↗ | alpha arrays › Domains of FliG › Middle domain of FliG › Middle domain of FliG › FliG_M | 0.66 | 54.0 | 4.45e-01 | 95.8% | 56.8% |
| 3838823 | 531.2.1.2 ↗ | alpha arrays › Domains of FliG › Middle domain of FliG › Middle domain of FliG › MgtE_N | 0.66 | 50.0 | 4.78e-01 | 87.5% | 85.0% |
| 3198374 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.66 | 54.0 | 3.15e-01 | 100.0% | 21.5% |
| 5080494 | 316.2.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Rv2827c C-terminal domain-like › Rv2827c C-terminal domain-like | 0.66 | 52.0 | 3.74e-01 | 89.6% | 55.2% |
| 4987609 | 109.13.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › MgtE N-terminal domain-like › MgtE N-terminal domain-like › MgtE_N | 0.65 | 55.0 | 4.39e-01 | 100.0% | 80.0% |
| 3724403 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 52.0 | 3.14e-01 | 97.9% | 24.9% |
| 3821459 | 185.1.1.4 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Prolamin_like | 0.62 | 49.0 | 4.40e-01 | 89.6% | 84.1% |
| 3386338 | 531.2.1.1 ↗ | alpha arrays › Domains of FliG › Middle domain of FliG › Middle domain of FliG › FliG_M | 0.61 | 46.0 | 3.93e-01 | 87.5% | 54.4% |
| 4547662 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.58 | 48.0 | 3.39e-01 | 100.0% | 93.9% |
| 3743020 | 4156.1.1.2 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_N,HA2_C | 0.57 | 48.0 | 3.20e-01 | 95.8% | 28.5% |
| 3260273 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.53 | 40.0 | 2.82e-01 | 87.5% | 52.2% |
D6
medium
residues 446-544
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nqxA01 | 3.10.170.10 | Alpha Beta › Roll › Elastase; domain 1 › | 0.74 | 63.0 | 5.38e-01 | 90.9% | 75.2% |
| 1h19A02 | 3.30.2010.30 | Alpha Beta › 2-Layer Sandwich › Zincin-like › | 0.70 | 58.0 | 5.89e-01 | 89.9% | 92.8% |
| 4jixB00 | 3.30.2010.10 | Alpha Beta › 2-Layer Sandwich › Zincin-like › "Metalloproteases (""zincins""), catalytic domain" | 0.68 | 46.0 | 4.61e-01 | 70.7% | 69.2% |
| 1iabA00 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.66 | 57.0 | 4.46e-01 | 92.9% | 91.5% |
| 2ljpA00 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.66 | 47.0 | 4.49e-01 | 93.9% | 63.0% |
| 3lmcA00 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.66 | 54.0 | 4.34e-01 | 88.9% | 99.0% |
| 2gjxA01 | 3.30.379.10 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like | 0.64 | 54.0 | 4.95e-01 | 91.9% | 83.6% |
| 1gep001 | 3.30.413.10 | Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 | 0.64 | 52.0 | 4.37e-01 | 89.9% | 75.9% |
| 1nowA01 | 3.30.379.10 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like | 0.64 | 53.0 | 4.91e-01 | 91.9% | 82.9% |
| 3ozoA01 | 3.30.379.10 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like | 0.63 | 52.0 | 4.31e-01 | 91.9% | 64.1% |
| 2iyfB02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.62 | 54.0 | 4.51e-01 | 93.9% | 87.8% |
| 3dteA01 | 1.10.10.2910 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.61 | 42.0 | 3.98e-01 | 100.0% | 59.8% |
| 6k2cA02 | 3.30.2410.10 | Alpha Beta › 2-Layer Sandwich › Hect, E3 ligase catalytic fold › Hect, E3 ligase catalytic domain | 0.61 | 52.0 | 5.03e-01 | 94.9% | 100.0% |
| 3p1vA02 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.60 | 52.0 | 4.04e-01 | 97.0% | 93.0% |
| 3pt3B00 | 3.30.2410.10 | Alpha Beta › 2-Layer Sandwich › Hect, E3 ligase catalytic fold › Hect, E3 ligase catalytic domain | 0.59 | 49.0 | 5.01e-01 | 92.9% | 100.0% |
| 4rhiA00 | 3.40.800.10 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain | 0.59 | 50.0 | 3.54e-01 | 92.9% | 91.5% |
| 3mizA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 50.0 | 4.54e-01 | 92.9% | 89.6% |
| 3kkeB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 51.0 | 4.50e-01 | 94.9% | 87.5% |
| 5v8sA02 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.58 | 49.0 | 4.31e-01 | 93.9% | 98.7% |
| 3h5nD02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 40.0 | 3.04e-01 | 73.7% | 89.0% |
| 1wu2A01 | 3.40.980.10 | Alpha Beta › 3-Layer(aba) Sandwich › Molybdenum Cofactor Biosythetic Enzyme; Chain A › MoaB/Mog-like domain | 0.57 | 47.0 | 4.17e-01 | 92.9% | 87.4% |
| 3s28A04 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.56 | 48.0 | 3.75e-01 | 96.0% | 76.2% |
| 4p5pA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.56 | 48.0 | 3.72e-01 | 96.0% | 100.0% |
| 3crmA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 45.0 | 3.93e-01 | 91.9% | 98.7% |
| 2ffeA01 | 3.40.50.10680 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CofD-like domains | 0.52 | 41.0 | 3.19e-01 | 84.8% | 99.5% |
| 4ljkG00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 44.0 | 3.47e-01 | 94.9% | 85.0% |
| 3apoA06 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 43.0 | 4.12e-01 | 90.9% | 88.5% |
| 2lndA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 41.0 | 3.95e-01 | 85.9% | 88.4% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4958679 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.76 | 60.0 | 4.87e-01 | 86.9% | 46.9% |
| 4972072 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.76 | 61.0 | 5.11e-01 | 84.8% | 55.0% |
| 3959623 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.75 | 59.0 | 5.24e-01 | 83.8% | 78.6% |
| 4458442 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.75 | 58.0 | 5.60e-01 | 81.8% | 80.0% |
| 5028287 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.73 | 60.0 | 4.74e-01 | 89.9% | 43.5% |
| 3405450 | 2498.1.1.62 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M76 | 0.72 | 54.0 | 4.16e-01 | 78.8% | 41.8% |
| 3281858 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.72 | 51.0 | 4.30e-01 | 73.7% | 49.1% |
| 4560524 | 2498.1.1.9 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M1 | 0.71 | 59.0 | 4.28e-01 | 90.9% | 81.1% |
| 3521708 | 2498.1.1.9 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M1 | 0.70 | 58.0 | 4.22e-01 | 90.9% | 73.8% |
| 5069411 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.69 | 60.0 | 4.55e-01 | 94.9% | 79.6% |
| 3923158 | 2498.1.1.2 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Astacin | 0.68 | 59.0 | 4.68e-01 | 92.9% | 93.3% |
| 4433013 | 2498.1.1.22 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY | 0.67 | 59.0 | 5.03e-01 | 94.9% | 84.5% |
| None | — | 0.67 | 56.0 | 5.32e-01 | 96.0% | 76.7% | |
| 4031195 | 2498.1.1.50 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Zn_peptidase_2 | 0.67 | 46.0 | 3.98e-01 | 71.7% | 47.1% |
| 4332917 | 2498.1.1.41 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M60 | 0.66 | 55.0 | 3.90e-01 | 90.9% | 34.3% |
| 3720589 | 2498.1.1.36 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › WLM | 0.66 | 57.0 | 5.15e-01 | 96.0% | 71.9% |
| 3553278 | 2498.2.1.4 ↗ | mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › Glycohydro_20b2 | 0.65 | 54.0 | 4.70e-01 | 91.9% | 77.4% |
| 3883178 | 261.1.1.0 ↗ | a+b complex topology › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain | 0.65 | 52.0 | 4.23e-01 | 89.9% | 64.0% |
| 3187631 | 2006.1.6.33 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_4 | 0.65 | 54.0 | 3.94e-01 | 91.9% | 94.3% |
| 3888566 | 261.1.1.0 ↗ | a+b complex topology › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain | 0.65 | 54.0 | 3.74e-01 | 94.9% | 35.9% |
| 3912414 | 2498.2.1.4 ↗ | mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › Glycohydro_20b2 | 0.65 | 54.0 | 4.68e-01 | 91.9% | 78.7% |
| 3963501 | 2498.1.1.24 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M61 | 0.64 | 57.0 | 4.07e-01 | 98.0% | 34.9% |
| 3519421 | 2498.1.1.62 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M76 | 0.64 | 46.0 | 3.93e-01 | 76.8% | 50.6% |
| 3983198 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.64 | 45.0 | 4.75e-01 | 72.7% | 98.8% |
| 860255 | 2498.2.1.4 ↗ | mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › Glycohydro_20b2 | 0.64 | 53.0 | 4.33e-01 | 91.9% | 63.0% |
| None | — | 0.63 | 55.0 | 4.00e-01 | 99.0% | 64.7% | |
| 3599416 | 261.1.1.0 ↗ | a+b complex topology › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain | 0.62 | 52.0 | 3.54e-01 | 92.9% | 28.5% |
| 3739722 | 261.1.1.1 ↗ | a+b complex topology › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › HECT | 0.62 | 51.0 | 3.46e-01 | 93.9% | 32.0% |
| 4353269 | 7512.1.1.1 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT | 0.62 | 54.0 | 4.42e-01 | 94.9% | 82.3% |
| 3581494 | 261.1.1.1 ↗ | a+b complex topology › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › HECT | 0.61 | 52.0 | 4.20e-01 | 94.9% | 54.4% |
| 185182 | 2498.1.1.29 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 | 0.61 | 42.0 | 3.96e-01 | 100.0% | 58.8% |
| 4141606 | 2498.1.1.40 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M66 | 0.60 | 52.0 | 3.72e-01 | 96.0% | 86.0% |
| 1718688 | 7512.1.1.8 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Epimerase_2 | 0.60 | 52.0 | 4.26e-01 | 94.9% | 81.8% |
| 3404623 | 7512.1.1.83 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT, EryCIII-like_C | 0.60 | 52.0 | 3.32e-01 | 94.9% | 30.3% |
| 3209417 | 261.1.1.1 ↗ | a+b complex topology › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › HECT | 0.60 | 51.0 | 3.38e-01 | 96.0% | 25.5% |
| 3172059 | 261.1.1.1 ↗ | a+b complex topology › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › HECT | 0.60 | 51.0 | 3.35e-01 | 96.0% | 23.7% |
| 3232611 | 261.1.1.1 ↗ | a+b complex topology › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › HECT | 0.58 | 47.0 | 2.91e-01 | 88.9% | 16.2% |
| 3255540 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.58 | 52.0 | 4.66e-01 | 100.0% | 94.3% |
| 3620171 | 2485.1.1.1 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin | 0.57 | 49.0 | 4.14e-01 | 94.9% | 61.8% |
| 3270412 | 261.1.1.1 ↗ | a+b complex topology › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › HECT | 0.57 | 48.0 | 3.32e-01 | 94.9% | 28.8% |
| 4584963 | 212.1.1.8 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribonuclease_P | 0.56 | 49.0 | 4.68e-01 | 99.0% | 98.3% |
| 3944981 | 2007.1.3.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › RcsD_ABL | 0.52 | 46.0 | 4.40e-01 | 100.0% | 87.8% |
| 2601252 | 7563.1.1.1 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › DNA_processg_A | 0.51 | 43.0 | 3.39e-01 | 93.9% | 82.7% |
| 3336093 | 2004.1.1.118 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AIG1 | 0.50 | 43.0 | 3.23e-01 | 100.0% | 68.2% |
D7
medium
residues 545-642
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lcvB01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.56 | 25.0 | 3.14e-01 | 100.0% | 68.4% |
| 4bbyA02 | 3.30.160.650 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 24.0 | 3.30e-01 | 79.6% | 84.1% |
| 4tkrA00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.52 | 43.0 | 3.57e-01 | 91.8% | 71.6% |
| 4jndA02 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.52 | 39.0 | 2.86e-01 | 79.6% | 61.9% |
| 2qgnA02 | 1.10.287.890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain | 0.51 | 37.0 | 3.95e-01 | 75.5% | 91.5% |
| 4wriA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.51 | 45.0 | 3.69e-01 | 100.0% | 90.4% |
| 2ifaB00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.51 | 35.0 | 2.83e-01 | 71.4% | 47.3% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4927922 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.60 | 26.0 | 3.19e-01 | 98.0% | 60.0% |
| 4018838 | 601.1.2.114 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › FIT | 0.51 | 43.0 | 3.51e-01 | 93.9% | 92.6% |
| 4964255 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.51 | 37.0 | 3.09e-01 | 78.6% | 41.6% |
| 4096919 | 323.1.1.6 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Carn_acyltransf | 0.50 | 44.0 | 2.76e-01 | 100.0% | 26.6% |