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MH884514.1__AYP68783.1__BpsM61_00009__00009

Bact-Vir

MH884514.1__AYP68783.1__BpsM61_00009__00009

Identity

Accession:
MH884514 ↗
Kingdom:
phage

Quality

95.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-45
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF09388.16 best SpoOE-like 58.2 8.80e-16 97.7% 97.6%
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6fndA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.95 79.0 5.01e-01 90.7% 21.0%
2yevA02 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.92 84.0 6.91e-01 100.0% 58.1%
3oxfA05 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.91 82.0 6.73e-01 100.0% 57.3%
2v0xA01 1.10.287.3160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.91 83.0 5.37e-01 100.0% 25.6%
1eqfA02 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.90 83.0 5.75e-01 100.0% 76.8%
3n71A03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.90 79.0 4.97e-01 100.0% 20.2%
3k6tB00 1.20.5.4010 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.87 79.0 7.59e-01 100.0% 87.8%
1sqhA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.86 71.0 4.72e-01 95.3% 24.1%
1qsdA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.85 76.0 5.67e-01 100.0% 42.2%
1wp7A00 1.10.287.770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like 0.85 76.0 6.59e-01 100.0% 79.7%
2wmmA01 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.82 74.0 7.08e-01 100.0% 87.8%
5n17A01 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.82 72.0 5.37e-01 100.0% 93.3%
4i5sB03 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.81 70.0 5.85e-01 100.0% 72.0%
3gi7A00 1.20.1270.180 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.80 57.0 4.26e-01 90.7% 32.0%
2gsoA01 3.40.720.10 Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A 0.78 69.0 4.17e-01 100.0% 21.5%
1b3qA01 1.10.287.560 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Histidine kinase CheA-like, homodimeric domain 0.78 63.0 5.70e-01 100.0% 66.1%
1hp8A00 1.10.287.1130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › CytochromE C oxidase copper chaperone 0.77 65.0 5.61e-01 97.7% 60.3%
6fhpD00 1.10.390.10 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 0.77 58.0 5.20e-01 83.7% 61.3%
1lujB01 1.10.10.490 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Beta-catenin-interacting ICAT 0.75 47.0 4.36e-01 83.7% 50.9%
1dd3A01 1.20.5.710 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Single helix bin 0.75 61.0 5.68e-01 95.3% 75.4%
1m62A00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.75 61.0 4.95e-01 100.0% 47.1%
1gvnD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 54.0 3.35e-01 86.0% 13.3%
5b1oA00 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.70 58.0 5.22e-01 100.0% 66.2%
2xokP00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.70 59.0 5.02e-01 100.0% 60.8%
2wgmA01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.69 56.0 4.76e-01 100.0% 54.9%
6ynwH01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.67 58.0 4.86e-01 100.0% 60.8%
2v40A02 1.10.300.10 Mainly Alpha › Orthogonal Bundle › Adenylosuccinate Synthetase, subunit A; domain 2 › Adenylosuccinate Synthetase, subunit A, domain 2 0.65 54.0 4.28e-01 95.3% 45.5%
1wpbG01 1.10.287.680 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.64 50.0 4.71e-01 90.7% 70.4%
2kw6A00 6.10.140.1300 Special › Helix non-globular › Helix Hairpins › 0.64 50.0 4.59e-01 100.0% 66.2%
4gzrC00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.63 51.0 4.74e-01 100.0% 73.8%
4ex8A00 3.40.1790.10 Alpha Beta › 3-Layer(aba) Sandwich › Indigoidine synthase fold › Indigoidine synthase domain 0.62 53.0 3.20e-01 95.3% 34.2%
4k08A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.61 49.0 3.60e-01 100.0% 89.6%
2fe1A00 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.60 49.0 3.60e-01 97.7% 56.9%
1vibA00 1.10.287.120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Neurotoxin B-IV-like 0.60 49.0 4.61e-01 97.7% 78.2%
4fpwB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 51.0 3.51e-01 100.0% 67.1%
3bemB00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.58 51.0 3.26e-01 100.0% 70.8%
4od8D00 6.10.140.1880 Special › Helix non-globular › Helix Hairpins › 0.55 46.0 4.41e-01 97.7% 86.3%
5ucoA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.53 46.0 3.18e-01 100.0% 28.1%
3aleA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.52 36.0 2.72e-01 81.4% 47.6%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3785883 4177.1.1.97 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › PF30147 1.00 95.0 5.94e-01 100.0% 23.2%
3279558 192.31.1.5 alpha bundles › Long alpha-hairpin › CP12 › CP12 › DUF4254 0.99 94.0 6.64e-01 100.0% 39.1%
3474664 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.99 94.0 5.97e-01 100.0% 25.3%
3726616 109.4.1.1315 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_7, TPR_8, TPR_10, TPR_12 0.99 93.0 5.17e-01 100.0% 9.9%
None 0.99 93.0 5.26e-01 100.0% 11.9%
3273348 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.99 93.0 4.88e-01 100.0% 4.5%
4142148 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.98 90.0 4.88e-01 97.7% 6.9%
3691078 109.4.1.194 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_10 0.98 84.0 4.67e-01 90.7% 9.0%
3477822 1147.1.1.1 alpha bundles › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › Occludin_ELL 0.98 92.0 6.30e-01 100.0% 36.0%
3872918 109.4.1.1286 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_12 0.98 92.0 5.60e-01 100.0% 20.0%
3628289 109.4.1.777 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.98 92.0 5.07e-01 100.0% 9.5%
3676047 109.4.1.2259 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_10, TPR_12, SNAP 0.98 87.0 4.76e-01 95.3% 7.5%
3643764 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.97 91.0 5.63e-01 100.0% 21.5%
3830525 109.4.1.1529 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › eIF3_p135, TPR_12 0.97 90.0 4.90e-01 100.0% 7.5%
3368459 109.4.1.777 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.97 90.0 4.99e-01 100.0% 9.5%
4972207 601.28.1.0 alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like 0.97 90.0 6.80e-01 100.0% 47.8%
3821367 109.4.1.1304 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_10, TPR_12 0.96 89.0 5.51e-01 100.0% 21.0%
3939646 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.96 89.0 4.74e-01 100.0% 5.1%
3350900 109.4.1.148 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › EST1_DNA_bind,EST1 0.96 89.0 4.84e-01 100.0% 7.3%
4363 605.8.1.1 alpha duplicates or obligate multimers › ROP-like › BAS1536-like › BAS1536-like › SpoOE-like 0.96 89.0 7.99e-01 100.0% 75.4%
3382906 109.4.1.2937 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › eIF3_p135, TPR_8, TPR_12 0.96 89.0 4.89e-01 100.0% 8.2%
3677853 109.4.1.1529 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › eIF3_p135, TPR_12 0.96 89.0 4.76e-01 100.0% 5.6%
4015471 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.96 84.0 5.92e-01 93.0% 35.1%
4672678 605.8.1.1 alpha duplicates or obligate multimers › ROP-like › BAS1536-like › BAS1536-like › SpoOE-like 0.96 90.0 8.15e-01 100.0% 78.2%
3701527 540.1.1.0 few secondary structure elements › Cytochrome c oxidase subunit h › Cytochrome c oxidase subunit h › Cytochrome c oxidase subunit h 0.96 80.0 6.60e-01 88.4% 54.3%
4011835 109.4.1.1320 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_7, TPR_10, TPR_12 0.95 87.0 6.36e-01 97.7% 42.0%
3541668 192.31.1.7 alpha bundles › Long alpha-hairpin › CP12 › CP12 › PF28906 0.95 87.0 7.27e-01 100.0% 61.4%
3386700 304.58.1.0 a+b two layers › Alpha-beta plaits › FepE-like › FepE-like 0.95 88.0 5.12e-01 100.0% 14.6%
4016322 109.4.1.1304 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_10, TPR_12 0.95 87.0 5.51e-01 100.0% 23.2%
4282118 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.95 86.0 4.67e-01 97.7% 13.8%
4034363 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.95 86.0 6.22e-01 100.0% 39.1%
3431349 109.4.1.3446 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_7, TPR_8, TPR_10, TPR_12, SNAP 0.94 86.0 4.66e-01 97.7% 6.9%
3172328 4177.1.1.97 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › PF30147 0.94 86.0 5.14e-01 100.0% 16.5%
4017359 109.4.1.198 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 0.94 88.0 5.05e-01 100.0% 72.8%
3615676 1189.1.1.0 alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor 0.94 85.0 5.14e-01 100.0% 17.6%
3832336 109.4.1.1304 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_10, TPR_12 0.94 87.0 4.73e-01 100.0% 45.1%
4028564 540.1.1.1 few secondary structure elements › Cytochrome c oxidase subunit h › Cytochrome c oxidase subunit h › Cytochrome c oxidase subunit h › COX6B 0.93 77.0 6.39e-01 88.4% 54.3%
3705344 192.31.1.0 alpha bundles › Long alpha-hairpin › CP12 › CP12 0.93 80.0 7.07e-01 93.0% 66.7%
3277747 160.1.1.0 alpha superhelices › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase 0.93 74.0 7.67e-01 86.0% 95.0%
3351064 540.1.1.1 few secondary structure elements › Cytochrome c oxidase subunit h › Cytochrome c oxidase subunit h › Cytochrome c oxidase subunit h › COX6B 0.92 76.0 6.49e-01 88.4% 58.5%
3978386 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.92 82.0 4.73e-01 97.7% 12.0%
4164825 4146.1.1.3 alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like › PKHD_C 0.92 80.0 7.87e-01 95.3% 91.1%
3312166 109.4.1.777 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.92 84.0 5.17e-01 100.0% 39.9%
3291574 192.29.1.248 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PF27150 0.91 82.0 5.78e-01 100.0% 34.4%
3806609 540.1.1.1 few secondary structure elements › Cytochrome c oxidase subunit h › Cytochrome c oxidase subunit h › Cytochrome c oxidase subunit h › COX6B 0.91 75.0 6.09e-01 88.4% 50.7%
3349142 192.31.1.2 alpha bundles › Long alpha-hairpin › CP12 › CP12 › DUF212 0.91 80.0 7.92e-01 97.7% 93.3%
3333592 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.90 80.0 5.04e-01 100.0% 21.0%
3750625 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.90 80.0 5.04e-01 100.0% 21.0%
3497073 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.89 79.0 4.37e-01 100.0% 8.4%
4002996 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.89 76.0 4.87e-01 97.7% 21.5%
139052 633.1.1.1 alpha bundles › Bromodomain-like › Bromodomain › Bromodomain › Bromodomain 0.88 80.0 5.51e-01 100.0% 72.2%
4997717 304.48.1.3 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.88 78.0 4.57e-01 100.0% 13.9%
4975294 601.28.1.0 alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like 0.88 78.0 6.08e-01 100.0% 47.8%
3432510 616.1.1.0 alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain 0.88 75.0 6.51e-01 95.3% 63.1%
4015147 2004.1.1.430 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, ABC_tran_Xtn 0.87 76.0 4.16e-01 100.0% 7.1%
3596714 633.1.1.0 alpha bundles › Bromodomain-like › Bromodomain › Bromodomain 0.84 76.0 5.56e-01 100.0% 41.8%
3768322 192.1.1.0 alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain 0.83 72.0 6.33e-01 100.0% 66.2%
3735607 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.83 72.0 5.87e-01 100.0% 53.8%
4959086 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.80 67.0 5.72e-01 100.0% 57.3%
3727276 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.77 66.0 5.27e-01 100.0% 50.6%
3716062 253.1.1.1 a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C 0.74 63.0 4.09e-01 100.0% 30.7%