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MH884514.1__AYP68792.1__BpsM61_00018__00018
Bact-VirMH884514.1__AYP68792.1__BpsM61_00018__00018
Identity
- Accession:
- MH884514 ↗
- Kingdom:
- phage
Quality
82.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-113
Domain cluster:
rep: Bro25__YP_009702174__Heliothis_virescens_ascovirus_3g__1246651__D4-128
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1l8rA00 | 3.10.260.20 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Ski | 0.71 | 55.0 | 5.71e-01 | 80.2% | 97.0% |
| 1sbxA00 | 3.10.260.20 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Ski | 0.67 | 51.0 | 5.26e-01 | 81.1% | 90.6% |
| 6mptA02 | 3.40.630.190 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › LCP protein | 0.62 | 39.0 | 4.42e-01 | 82.0% | 84.5% |
| 3ovcA01 | 3.30.200.150 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.55 | 29.0 | 3.50e-01 | 88.3% | 78.9% |
| 3tqeA02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.54 | 35.0 | 4.15e-01 | 79.3% | 100.0% |
| 1pcfA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.54 | 30.0 | 3.77e-01 | 75.7% | 90.9% |
| 2dchX02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.52 | 40.0 | 4.05e-01 | 93.7% | 82.0% |
| 7e7gA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.52 | 40.0 | 3.18e-01 | 84.7% | 79.1% |
| 4d7sA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 37.0 | 3.59e-01 | 78.4% | 98.5% |
| 4aghA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.50 | 33.0 | 3.77e-01 | 81.1% | 91.3% |
| 2oo8X01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.50 | 25.0 | 3.24e-01 | 95.5% | 86.7% |
| 2a5yC03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 35.0 | 3.52e-01 | 81.1% | 71.2% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3968916 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.86 | 77.0 | 7.94e-01 | 100.0% | 99.0% |
| 1790169 | 101.1.9.7 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Baculo_PEP_N | 0.82 | 72.0 | 7.37e-01 | 98.2% | 97.2% |
| 3163642 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.78 | 71.0 | 7.14e-01 | 98.2% | 98.2% |
| 3516620 | 101.1.9.107 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › PF25867 | 0.73 | 52.0 | 5.56e-01 | 73.0% | 100.0% |
| 3983963 | 101.1.9.41 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › ORF6N | 0.72 | 61.0 | 6.28e-01 | 91.0% | 100.0% |
| 3529465 | 101.1.9.4 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Ski_Sno | 0.72 | 55.0 | 5.65e-01 | 80.2% | 94.3% |
| 3947416 | 101.1.9.88 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Phage_pRha | 0.71 | 61.0 | 6.20e-01 | 92.8% | 100.0% |
| 4998593 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.70 | 53.0 | 5.23e-01 | 78.4% | 77.4% |
| 4032453 | 101.1.9.78 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › AntA | 0.70 | 55.0 | 5.92e-01 | 82.9% | 100.0% |
| 3932937 | 101.1.9.4 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Ski_Sno | 0.67 | 52.0 | 5.53e-01 | 81.1% | 100.0% |
| 3230106 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.67 | 52.0 | 5.42e-01 | 82.0% | 98.0% |
| 3984393 | 101.1.9.88 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Phage_pRha | 0.67 | 52.0 | 5.25e-01 | 82.0% | 84.5% |
| 3944712 | 101.1.9.40 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › P22_AR_N | 0.66 | 52.0 | 5.40e-01 | 83.8% | 90.5% |
| 4954530 | 101.1.9.143 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Virulence_RhuM | 0.65 | 55.0 | 5.50e-01 | 92.8% | 100.0% |
| 3603228 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.65 | 31.0 | 3.37e-01 | 94.6% | 51.6% |
| 3978692 | 101.1.9.143 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Virulence_RhuM | 0.64 | 56.0 | 5.10e-01 | 96.4% | 92.0% |
| 3400699 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.61 | 47.0 | 4.87e-01 | 82.0% | 100.0% |
| 3486318 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.60 | 37.0 | 4.21e-01 | 72.1% | 85.0% |
| 3214527 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.57 | 47.0 | 4.54e-01 | 90.1% | 88.0% |
| 5001454 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.55 | 36.0 | 4.11e-01 | 70.3% | 96.0% |
| 3705972 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.55 | 41.0 | 3.95e-01 | 77.5% | 97.6% |
| 5042700 | 618.1.1.0 ↗ | a+b complex topology › DNA mimic protein DMP12-like › DNA mimic protein DMP12-related › DNA mimic protein DMP12-related | 0.53 | 39.0 | 4.13e-01 | 96.4% | 86.9% |
| 4939276 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.53 | 40.0 | 4.05e-01 | 91.0% | 79.1% |
| 5056440 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.51 | 41.0 | 3.28e-01 | 90.1% | 71.0% |
| 4928183 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.50 | 35.0 | 2.43e-01 | 71.2% | 73.9% |
D2
high
residues 131-189
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lvuB00 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.75 | 34.0 | 2.14e-01 | 81.4% | 10.1% |
| 3v9rA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.69 | 49.0 | 4.37e-01 | 78.0% | 54.5% |
| 1kx5A00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.66 | 51.0 | 3.83e-01 | 88.1% | 35.6% |
| 7egfc01 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.64 | 47.0 | 4.25e-01 | 81.4% | 58.1% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5059555 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.84 | 77.0 | 4.60e-01 | 100.0% | 26.9% |
| 3224294 | 5050.1.1.32 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Acatn | 0.66 | 56.0 | 3.28e-01 | 94.9% | 26.7% |
| 3386264 | 2004.1.1.195 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C | 0.66 | 48.0 | 2.91e-01 | 76.3% | 22.7% |
| 5062338 | 3714.1.1.0 ↗ | a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain | 0.65 | 57.0 | 5.00e-01 | 100.0% | 65.6% |
| 3942142 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.52 | 36.0 | 2.40e-01 | 72.9% | 41.6% |