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MH884514.1__AYP68806.1__BpsM61_00032__00032
Bact-VirMH884514.1__AYP68806.1__BpsM61_00032__00032
Identity
- Accession:
- MH884514 ↗
- Kingdom:
- phage
Quality
88.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-61
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xdpA02 | 3.30.1840.10 | Alpha Beta › 2-Layer Sandwich › polyphosphate kinase like › Polyphosphate kinase middle domain | 0.63 | 32.0 | 2.20e-01 | 96.6% | 13.9% |
| 3f14A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 50.0 | 4.19e-01 | 100.0% | 91.1% |
| 3ff2A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 48.0 | 4.02e-01 | 96.6% | 91.5% |
| 2c1lA02 | 2.40.330.30 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › | 0.58 | 50.0 | 3.68e-01 | 100.0% | 68.8% |
| 2exdA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 45.0 | 4.26e-01 | 100.0% | 68.9% |
| 2gb5A01 | 3.90.79.20 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › | 0.58 | 50.0 | 3.91e-01 | 100.0% | 44.4% |
| 1tuhA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 48.0 | 3.85e-01 | 100.0% | 88.5% |
| 3en8A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 47.0 | 4.01e-01 | 100.0% | 90.2% |
| 3ebtA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 48.0 | 3.84e-01 | 100.0% | 89.3% |
| 3kkgA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 47.0 | 3.71e-01 | 100.0% | 80.6% |
| 3wwvA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 46.0 | 4.52e-01 | 100.0% | 82.8% |
| 3fkaB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 46.0 | 3.87e-01 | 100.0% | 88.3% |
| 2mhjA00 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.57 | 41.0 | 3.61e-01 | 79.7% | 86.3% |
| 4mjdA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 45.0 | 3.84e-01 | 96.6% | 87.6% |
| 4j8tA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 46.0 | 3.78e-01 | 100.0% | 89.1% |
| 2wpvE00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 35.0 | 2.23e-01 | 100.0% | 13.6% |
| 1uwvA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 45.0 | 4.26e-01 | 100.0% | 72.6% |
| 4i1kA00 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.56 | 46.0 | 3.82e-01 | 100.0% | 78.8% |
| 4ohvA03 | 2.40.30.330 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Pre-mRNA cleavage complex subunit Clp1, C-terminal domain | 0.55 | 44.0 | 3.90e-01 | 89.8% | 93.3% |
| 4qmgA02 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 47.0 | 3.64e-01 | 100.0% | 57.6% |
| 4u13A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 44.0 | 3.80e-01 | 96.6% | 88.1% |
| 2qgqA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 48.0 | 4.80e-01 | 100.0% | 98.3% |
| 2eqsA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 48.0 | 4.21e-01 | 100.0% | 82.0% |
| 3f8xB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 43.0 | 3.56e-01 | 100.0% | 78.8% |
| 3w1yB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 41.0 | 3.51e-01 | 88.1% | 63.5% |
| 2bw2A01 | 3.10.20.420 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Bypass-of-forespore C, N-terminal domain | 0.52 | 39.0 | 4.01e-01 | 79.7% | 98.2% |
| 3f7sA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 42.0 | 3.38e-01 | 100.0% | 88.0% |
| 7sbiA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 41.0 | 3.94e-01 | 91.5% | 97.1% |
| 1m4iB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 45.0 | 3.28e-01 | 100.0% | 56.2% |
| 1wx8A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 40.0 | 3.50e-01 | 88.1% | 62.5% |
| 2k14A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 44.0 | 4.01e-01 | 100.0% | 71.4% |
| 1euvB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 40.0 | 3.73e-01 | 89.8% | 75.9% |
| 3ke7B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 40.0 | 3.26e-01 | 94.9% | 76.7% |
| 3ajvA01 | 3.40.1170.20 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › tRNA intron endonuclease, N-terminal domain | 0.50 | 42.0 | 3.86e-01 | 91.5% | 80.8% |
| 2derA02 | 2.30.30.280 | Mainly Beta › Roll › SH3 type barrels. › Adenine nucleotide alpha hydrolases-like domains | 0.50 | 35.0 | 3.44e-01 | 78.0% | 95.7% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3353150 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.68 | 60.0 | 5.19e-01 | 100.0% | 91.5% |
| 3293682 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.68 | 60.0 | 5.07e-01 | 100.0% | 91.0% |
| 3462303 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.67 | 59.0 | 4.08e-01 | 100.0% | 47.8% |
| 3219337 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.67 | 58.0 | 4.93e-01 | 100.0% | 80.0% |
| 3646946 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.66 | 58.0 | 4.93e-01 | 100.0% | 93.9% |
| 3418697 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.66 | 57.0 | 4.89e-01 | 100.0% | 94.9% |
| 5018203 | 316.1.1.41 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF6036 | 0.65 | 46.0 | 3.20e-01 | 76.3% | 52.4% |
| 3806563 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.63 | 54.0 | 4.39e-01 | 100.0% | 90.0% |
| 2440701 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.62 | 53.0 | 4.18e-01 | 100.0% | 78.6% |
| 4934433 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.62 | 45.0 | 4.63e-01 | 78.0% | 100.0% |
| 3430671 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.61 | 53.0 | 4.21e-01 | 100.0% | 80.0% |
| 3329704 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.61 | 52.0 | 4.49e-01 | 100.0% | 94.0% |
| 3944705 | 2.1.1.19 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › NfeD | 0.60 | 48.0 | 4.44e-01 | 100.0% | 69.3% |
| 5083197 | 2.1.1.19 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › NfeD | 0.58 | 47.0 | 4.49e-01 | 100.0% | 75.7% |
| 4342660 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.58 | 47.0 | 4.47e-01 | 100.0% | 77.1% |
| 3603774 | 239.5.1.1 ↗ | beta barrels › Ribosomal protein L25-like › 40S ribosomal protein S3A N-terminal domain › 40S ribosomal protein S3A N-terminal domain › Ribosomal_S3Ae | 0.57 | 41.0 | 3.59e-01 | 76.3% | 75.6% |
| 5081375 | 2.1.1.19 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › NfeD | 0.57 | 47.0 | 4.45e-01 | 100.0% | 77.1% |
| 3971829 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.56 | 45.0 | 4.39e-01 | 100.0% | 81.5% |
| 3391557 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.56 | 48.0 | 4.39e-01 | 100.0% | 72.5% |
| 2605239 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.56 | 45.0 | 3.76e-01 | 98.3% | 85.0% |
| 4112980 | 2.1.1.100 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM_2 | 0.56 | 48.0 | 4.60e-01 | 100.0% | 88.6% |
| 4182798 | 2.1.1.88 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD2 | 0.55 | 48.0 | 4.32e-01 | 100.0% | 69.4% |
| 3307679 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.55 | 44.0 | 3.58e-01 | 100.0% | 79.3% |
| 4338421 | 2.1.1.100 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM_2 | 0.55 | 47.0 | 4.65e-01 | 100.0% | 98.5% |
| 4498774 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 44.0 | 4.30e-01 | 100.0% | 81.5% |
| 3960172 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.54 | 44.0 | 3.71e-01 | 100.0% | 95.8% |
| 5042551 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 46.0 | 4.53e-01 | 100.0% | 87.3% |
| 4077955 | 2.1.1.100 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM_2 | 0.54 | 47.0 | 4.52e-01 | 100.0% | 94.3% |
| 3516972 | 2004.1.1.150 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DRMBL | 0.54 | 47.0 | 3.55e-01 | 96.6% | 92.1% |
| 3972261 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 46.0 | 4.66e-01 | 100.0% | 100.0% |
| 3740667 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.54 | 44.0 | 3.82e-01 | 100.0% | 57.9% |
| 3578390 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 47.0 | 3.32e-01 | 100.0% | 32.1% |
| 3413904 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.54 | 47.0 | 4.31e-01 | 100.0% | 77.5% |
| 4482072 | 3121.1.1.2 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 | 0.53 | 37.0 | 3.32e-01 | 74.6% | 77.8% |
| 5028951 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.53 | 41.0 | 3.85e-01 | 84.7% | 93.3% |
| 4424090 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 47.0 | 4.34e-01 | 100.0% | 77.3% |
| 4289266 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.53 | 44.0 | 4.11e-01 | 100.0% | 73.3% |
| 4083610 | 2.1.1.100 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM_2 | 0.53 | 45.0 | 4.43e-01 | 100.0% | 96.9% |
| 4395120 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.53 | 47.0 | 4.47e-01 | 100.0% | 88.4% |
| 4224821 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.53 | 36.0 | 3.04e-01 | 72.9% | 37.4% |
| 3616998 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 45.0 | 3.94e-01 | 100.0% | 73.7% |
| 3591227 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.52 | 47.0 | 3.03e-01 | 100.0% | 26.3% |
| 3605283 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.52 | 47.0 | 3.06e-01 | 100.0% | 27.2% |
| 4223146 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.52 | 45.0 | 4.48e-01 | 100.0% | 96.7% |
| 4032266 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.51 | 43.0 | 4.33e-01 | 100.0% | 95.0% |
| 4654307 | 2.1.1.73 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgA_N | 0.51 | 44.0 | 4.22e-01 | 100.0% | 94.3% |
| 4376939 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.51 | 44.0 | 4.19e-01 | 100.0% | 95.7% |
| 4501678 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.51 | 43.0 | 4.27e-01 | 100.0% | 89.2% |
| 3960506 | 221.1.3.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Sulfite oxidase, middle catalytic domain | 0.50 | 38.0 | 2.85e-01 | 88.1% | 71.7% |
| 3955910 | 221.1.3.1 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Sulfite oxidase, middle catalytic domain › Oxidored_molyb | 0.50 | 38.0 | 2.84e-01 | 88.1% | 71.7% |