←Back to structures
MH884514.1__AYP68828.1__BpsM61_00054__00054
Bact-VirMH884514.1__AYP68828.1__BpsM61_00054__00054
Identity
- Accession:
- MH884514 ↗
- Kingdom:
- phage
Quality
93.5
mean pLDDT
Cluster
View cluster (247 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-105
Domain cluster:
rep: NC_073317.1__YP_010749072.1__QCF72_gp16__00016__D4-119
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pp6A02 | 2.40.10.210 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins (gpFII-like) | 0.82 | 49.0 | 6.12e-01 | 99.0% | 95.2% |
| 6ku8A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.76 | 48.0 | 5.58e-01 | 100.0% | 91.3% |
| 3qzqA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.76 | 47.0 | 5.47e-01 | 100.0% | 89.9% |
| 3gs9A01 | 6.20.110.10 | Special › Other non-globular › Thrombin, subunit H › | 0.69 | 52.0 | 5.74e-01 | 100.0% | 98.7% |
| 2hrvA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.64 | 47.0 | 4.77e-01 | 100.0% | 78.9% |
| 6toaE01 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.64 | 59.0 | 5.93e-01 | 99.0% | 100.0% |
| 3fanA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.64 | 39.0 | 4.40e-01 | 100.0% | 82.2% |
| 3f3bA00 | 2.40.10.370 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Protein of unknown function DUF3599 | 0.63 | 58.0 | 5.53e-01 | 100.0% | 90.4% |
| 2kvoA01 | 2.40.30.220 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Photosystem II Psb28 | 0.61 | 47.0 | 4.67e-01 | 98.0% | 77.9% |
| 2kcaA00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.61 | 53.0 | 5.17e-01 | 100.0% | 88.1% |
| 1zyoA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 41.0 | 4.38e-01 | 100.0% | 89.2% |
| 1dr9A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 35.0 | 3.62e-01 | 70.7% | 65.3% |
| 2ijd101 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.56 | 50.0 | 4.13e-01 | 100.0% | 93.9% |
| 1t7vA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 34.0 | 3.62e-01 | 70.7% | 68.9% |
| 6k2lA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 39.0 | 3.79e-01 | 73.7% | 66.7% |
| 3g2fA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 37.0 | 3.97e-01 | 100.0% | 79.3% |
| 4c84A00 | 3.50.30.30 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › | 0.55 | 38.0 | 3.45e-01 | 73.7% | 99.3% |
| 3eaaA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.51 | 46.0 | 3.92e-01 | 100.0% | 77.8% |
| 3oymA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 29.0 | 3.26e-01 | 75.8% | 77.1% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5082946 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.76 | 56.0 | 5.97e-01 | 76.8% | 100.0% |
| 4669352 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.75 | 65.0 | 6.27e-01 | 100.0% | 82.7% |
| 5003311 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 68.0 | 6.57e-01 | 100.0% | 95.5% |
| 3943285 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 68.0 | 6.56e-01 | 100.0% | 95.4% |
| 5038876 | 1.1.13.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach | 0.71 | 60.0 | 6.29e-01 | 100.0% | 96.7% |
| 4031786 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.69 | 56.0 | 6.06e-01 | 99.0% | 100.0% |
| 4032883 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.65 | 59.0 | 5.83e-01 | 100.0% | 92.4% |
| 169594 | 1.1.13.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF3599 | 0.63 | 58.0 | 5.53e-01 | 100.0% | 90.4% |
| 5022644 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 41.0 | 4.20e-01 | 73.7% | 69.5% |
| 1147338 | 1.1.5.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pico_P2A | 0.62 | 45.0 | 4.06e-01 | 100.0% | 54.2% |
| 138821 | 1.11.1.1 ↗ | beta barrels › cradle loop barrel › Photosystem II accessory factor Psb28 › Photosystem II accessory factor Psb28 › Psb28 | 0.61 | 47.0 | 4.44e-01 | 98.0% | 67.5% |
| 3453256 | 1.1.5.68 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Nal1_C | 0.61 | 51.0 | 3.66e-01 | 91.9% | 84.4% |
| 4259247 | 1.11.1.1 ↗ | beta barrels › cradle loop barrel › Photosystem II accessory factor Psb28 › Photosystem II accessory factor Psb28 › Psb28 | 0.61 | 45.0 | 4.55e-01 | 98.0% | 77.8% |
| 119197 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.61 | 53.0 | 5.17e-01 | 100.0% | 88.1% |
| 4934715 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.61 | 52.0 | 3.96e-01 | 94.9% | 86.3% |
| 3967181 | 1.1.7.80 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RND-MFP_C | 0.60 | 36.0 | 3.62e-01 | 75.8% | 58.0% |
| 3340540 | 1.1.17.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Nal1_C | 0.60 | 50.0 | 3.69e-01 | 91.9% | 86.2% |
| 3695446 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.60 | 52.0 | 3.92e-01 | 96.0% | 86.1% |
| 3730611 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.60 | 52.0 | 3.96e-01 | 96.0% | 86.4% |
| 4373808 | 1.11.1.1 ↗ | beta barrels › cradle loop barrel › Photosystem II accessory factor Psb28 › Photosystem II accessory factor Psb28 › Psb28 | 0.59 | 46.0 | 4.52e-01 | 98.0% | 75.5% |
| 4178260 | 220.1.1.219 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch | 0.58 | 33.0 | 3.56e-01 | 99.0% | 63.5% |
| 4260208 | 1.1.13.62 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27197 | 0.57 | 52.0 | 5.08e-01 | 97.0% | 98.1% |
| 3230635 | 2484.1.1.190 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FBA_2 | 0.53 | 39.0 | 2.93e-01 | 77.8% | 43.8% |
| 3236774 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.52 | 38.0 | 2.70e-01 | 76.8% | 36.3% |
| 3435863 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.51 | 37.0 | 2.87e-01 | 100.0% | 34.9% |
| 3401352 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 33.0 | 3.18e-01 | 99.0% | 55.8% |