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MH884514.1__AYP68834.1__BpsM61_00060__00060
Bact-VirMH884514.1__AYP68834.1__BpsM61_00060__00060
Identity
- Accession:
- MH884514 ↗
- Kingdom:
- phage
Quality
55.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 51-173_319-359
Domain cluster:
rep: MN698245.1__QGZ18159.1__HTVC111P_gp46__00046__D46-220
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3a8pA02 | 6.10.140.680 | Special › Helix non-globular › Helix Hairpins › | 0.56 | 28.0 | 3.32e-01 | 89.0% | 68.4% |
| 3nz4B03 | 1.10.274.20 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 | 0.54 | 30.0 | 3.72e-01 | 89.0% | 86.5% |
| 2i53A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.50 | 34.0 | 3.68e-01 | 73.2% | 79.7% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4032310 | 159.1.2.6 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail | 0.81 | 61.0 | 6.34e-01 | 76.8% | 100.0% |
| 3963765 | 159.1.2.5 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › TMP_3 | 0.68 | 51.0 | 4.92e-01 | 78.7% | 100.0% |
| 5031295 | 601.7.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HepT-like | 0.62 | 30.0 | 3.25e-01 | 82.3% | 52.9% |
| 5049791 | 601.7.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HepT-like | 0.61 | 29.0 | 3.19e-01 | 82.9% | 52.9% |
| 3627942 | 3755.4.1.1 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › PI3K_P85_iSH2 | 0.60 | 27.0 | 2.66e-01 | 78.7% | 36.6% |
| 3935030 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.55 | 22.0 | 2.70e-01 | 89.6% | 55.2% |
| 3767329 | 5001.1.1.11 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_4 | 0.54 | 38.0 | 3.24e-01 | 71.3% | 90.1% |
| 3781506 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.53 | 26.0 | 2.70e-01 | 87.2% | 47.1% |
| 4026793 | 3871.1.1.0 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST | 0.50 | 36.0 | 3.81e-01 | 72.6% | 82.8% |
| 5017402 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.50 | 38.0 | 3.39e-01 | 78.0% | 94.0% |
D2
medium
residues 174-318
Domain cluster:
rep: IMGVR_UViG_3300002481_000051-3300002481-JGI24020J35080_100021718__D239-356
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10145.15 best | PhageMin_Tail | 37.8 | 2.80e-09 | 83.5% | 43.8% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1sg2A00 | 3.30.910.20 | Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain | 0.64 | 25.0 | 2.63e-01 | 92.4% | 36.2% |
| 3m1tA00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.58 | 47.0 | 3.92e-01 | 89.7% | 93.7% |
| 3bhqA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 31.0 | 2.75e-01 | 73.8% | 38.1% |
| 3dtoA01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.55 | 29.0 | 3.50e-01 | 88.3% | 79.5% |
| 6cnzF00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.53 | 37.0 | 3.68e-01 | 72.4% | 79.1% |
| 2qwtA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 29.0 | 2.80e-01 | 73.8% | 44.9% |
| 4wbyA02 | 1.10.3090.10 | Mainly Alpha › Orthogonal Bundle › cca-adding enzyme, domain 2 › cca-adding enzyme, domain 2 | 0.52 | 36.0 | 3.14e-01 | 70.3% | 57.6% |
| 7qocA01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.51 | 35.0 | 3.31e-01 | 70.3% | 67.4% |
| 4hjzA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.50 | 41.0 | 3.89e-01 | 91.0% | 87.4% |
D3
medium
residues 495-614