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MH898687.1__AYP69229.1__Edno5_0021__00021

Bact-Vir

MH898687.1__AYP69229.1__Edno5_0021__00021

Identity

Accession:
MH898687 ↗
Kingdom:
phage

Quality

77.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 15-90
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03869.21 best Arc 29.6 6.90e-07 43.4% 52.0%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ijlB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 34.0 3.00e-01 77.6% 41.3%
4h15A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 42.0 2.94e-01 85.5% 42.9%
1eyvB00 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.52 36.0 2.97e-01 76.3% 39.8%
1u9pA00 1.10.1220.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like 0.50 41.0 3.76e-01 85.5% 74.0%
1rm6D04 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.50 44.0 3.13e-01 98.7% 92.8%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3736851 109.3.1.179 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DUF7708 0.57 49.0 3.50e-01 98.7% 51.2%
5003296 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.57 41.0 3.66e-01 76.3% 79.1%