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MH898687.1__AYP69245.1__Edno5_0037__00037

Bact-Vir

MH898687.1__AYP69245.1__Edno5_0037__00037

Identity

Accession:
MH898687 ↗
Kingdom:
phage

Quality

85.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Gofduovirus› Edwardsiella_phage_Edno5

TaxID: 2419942

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-60
PDB
Domain cluster: rep: OM519319.1__UNI71223.1__P5_0046__00046__D5-73
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3vpbE00 2.20.28.160 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.59 34.0 3.54e-01 100.0% 60.7%
1b5eA00 3.30.572.10 Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain 0.53 42.0 3.00e-01 100.0% 48.1%
4ghbA00 2.40.160.190 Mainly Beta › Beta Barrel › Porin › 0.52 43.0 2.92e-01 100.0% 29.0%
1dq3A04 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.51 38.0 3.24e-01 86.4% 73.7%
3egyX00 3.30.572.10 Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain 0.50 39.0 2.82e-01 98.3% 44.4%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4890599 1.1.7.80 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RND-MFP_C 0.61 31.0 3.06e-01 94.9% 40.9%
3306595 4041.1.1.1 ↗ a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 0.57 43.0 3.22e-01 88.1% 91.4%
3938992 7579.1.1.42 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 0.52 37.0 2.41e-01 78.0% 45.4%