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MH925092.1__QAY02010.1__VpaJT1_82__00080
Bact-VirMH925092.1__QAY02010.1__VpaJT1_82__00080
Identity
- Accession:
- MH925092 ↗
- Kingdom:
- phage
Quality
96.1
mean pLDDT
Cluster
View cluster (13 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-27_140-170
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ivxB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.50 | 34.0 | 2.83e-01 | 72.4% | 81.7% |
D2
medium
residues 28-139_171-180
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01520.24 best | Amidase_3 | 32.8 | 9.70e-08 | 92.6% | 46.6% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4rn7A00 | 3.40.630.40 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn-dependent exopeptidases | 0.89 | 85.0 | 7.17e-01 | 99.2% | 83.9% |
| 1xovA01 | 3.40.630.40 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn-dependent exopeptidases | 0.87 | 81.0 | 6.98e-01 | 97.5% | 84.2% |
| 3qayA00 | 3.40.630.40 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn-dependent exopeptidases | 0.86 | 81.0 | 6.88e-01 | 97.5% | 82.2% |
| 3czxA00 | 3.40.630.40 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn-dependent exopeptidases | 0.81 | 75.0 | 6.44e-01 | 97.5% | 83.0% |
| 1rtqA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.68 | 62.0 | 4.64e-01 | 98.4% | 92.8% |
| 5e3iA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.63 | 44.0 | 4.82e-01 | 98.4% | 87.9% |
| 4nqrA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 45.0 | 4.11e-01 | 78.7% | 72.9% |
| 3czcA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 37.0 | 4.16e-01 | 96.7% | 86.0% |
| 2f7vA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.56 | 49.0 | 3.91e-01 | 96.7% | 59.5% |
| 4q3kB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 47.0 | 3.82e-01 | 100.0% | 81.4% |
| 4rxtA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 45.0 | 4.33e-01 | 99.2% | 81.8% |
| 4fshA01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.50 | 40.0 | 3.94e-01 | 98.4% | 80.0% |
| 4maaA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.50 | 44.0 | 3.94e-01 | 94.3% | 73.5% |
| 4m1aA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.50 | 37.0 | 3.89e-01 | 89.3% | 87.9% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4180517 | 2011.1.1.5 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Amidase_3 | 0.90 | 84.0 | 7.14e-01 | 96.7% | 83.9% |
| 1406254 | 2011.1.1.5 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Amidase_3 | 0.89 | 85.0 | 7.17e-01 | 99.2% | 83.9% |
| 2772634 | 2011.1.1.5 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Amidase_3 | 0.89 | 84.0 | 6.94e-01 | 98.4% | 85.8% |
| 3959830 | 2011.1.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases | 0.89 | 85.0 | 6.96e-01 | 99.2% | 78.5% |
| 4421480 | 2011.1.1.5 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Amidase_3 | 0.88 | 83.0 | 7.08e-01 | 97.5% | 86.1% |
| 10179 | 2011.1.1.5 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Amidase_3 | 0.87 | 81.0 | 6.94e-01 | 97.5% | 82.8% |
| 4230376 | 2011.1.1.5 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Amidase_3 | 0.86 | 81.0 | 6.90e-01 | 97.5% | 83.9% |
| 5045832 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.76 | 68.0 | 5.05e-01 | 98.4% | 63.0% |
| 4977836 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.60 | 42.0 | 2.99e-01 | 73.0% | 68.5% |
| 3660471 | 2007.2.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › FMN_red | 0.57 | 53.0 | 4.38e-01 | 100.0% | 82.9% |
| 4972062 | 2007.2.2.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › PTS_IIB | 0.57 | 37.0 | 3.93e-01 | 99.2% | 74.1% |
| 3245980 | 7516.1.1.33 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › DUF273 | 0.56 | 40.0 | 2.90e-01 | 73.8% | 77.3% |
| 3443854 | 2003.1.1.39 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Sacchrp_dh_NADP | 0.56 | 34.0 | 3.43e-01 | 91.8% | 59.2% |
| 3957232 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.55 | 39.0 | 3.96e-01 | 74.6% | 98.4% |
| 3929347 | 7579.1.1.70 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF1057 | 0.55 | 49.0 | 3.58e-01 | 96.7% | 81.6% |
| 5019748 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 38.0 | 3.89e-01 | 73.0% | 85.0% |
| 1669079 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.52 | 29.0 | 3.54e-01 | 80.3% | 94.0% |
| 4426919 | 2004.1.1.414 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU, MMR_HSR1 | 0.51 | 45.0 | 4.02e-01 | 100.0% | 89.4% |
| 1196959 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.51 | 29.0 | 3.56e-01 | 78.7% | 97.1% |
| 3692592 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.51 | 39.0 | 4.16e-01 | 95.9% | 90.9% |
| 4997732 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.50 | 40.0 | 3.92e-01 | 99.2% | 79.2% |