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MH937468.1__AZF92376.1__CHPC879_0041__00040
Bact-VirMH937468.1__AZF92376.1__CHPC879_0041__00040
Identity
- Accession:
- MH937468 ↗
- Kingdom:
- phage
Quality
80.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Aliceevansviridae›
Moineauvirus›
Streptococcus_phage_CHPC879
TaxID: 2365045
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 32-69
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zvkA00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.60 | 45.0 | 3.15e-01 | 84.2% | 25.4% |
| 3npdA00 | 3.30.300.250 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.60 | 51.0 | 3.68e-01 | 100.0% | 43.4% |
| 3bmbA01 | 1.10.286.20 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › | 0.57 | 45.0 | 4.40e-01 | 100.0% | 90.7% |
| 2nxpB00 | 1.25.40.500 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TFIID subunit TAF5, NTD2 domain | 0.56 | 47.0 | 3.21e-01 | 100.0% | 24.8% |
| 3dfzB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 41.0 | 2.98e-01 | 84.2% | 28.8% |
| 1ufvA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 41.0 | 2.80e-01 | 92.1% | 28.5% |
| 5hciC00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 41.0 | 2.55e-01 | 92.1% | 21.5% |
| 4lgvA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 40.0 | 2.70e-01 | 97.4% | 24.9% |
| 3pieC05 | 2.170.260.40 | Mainly Beta › Beta Complex › paz domain › | 0.52 | 40.0 | 2.65e-01 | 86.8% | 53.9% |
| 1pjqA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 39.0 | 2.88e-01 | 84.2% | 32.1% |
| 4ezbA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 38.0 | 2.55e-01 | 78.9% | 50.8% |
| 3dktA02 | 3.30.2320.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain | 0.52 | 42.0 | 3.23e-01 | 100.0% | 38.9% |
| 2wtbA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 36.0 | 2.44e-01 | 81.6% | 36.7% |
| 1l1lA02 | 3.30.1620.10 | Alpha Beta › 2-Layer Sandwich › b-12 dependent (class ii) ribonucleotide reductase, Chain A, Domain 2 › b-12 dependent (class ii) ribonucleotide reductase, Chain A, Domain 2 | 0.51 | 40.0 | 3.02e-01 | 100.0% | 35.7% |
| 2j4bB00 | 1.25.40.500 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TFIID subunit TAF5, NTD2 domain | 0.50 | 42.0 | 2.96e-01 | 97.4% | 28.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4055808 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.57 | 41.0 | 3.02e-01 | 84.2% | 46.9% |
| 3364824 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.56 | 38.0 | 2.57e-01 | 73.7% | 48.8% |
| 3482565 | 109.4.1.369 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SNAPC1 | 0.56 | 39.0 | 2.72e-01 | 73.7% | 23.8% |
| 4983366 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.53 | 43.0 | 3.17e-01 | 100.0% | 36.8% |
| 4967852 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.53 | 38.0 | 2.73e-01 | 81.6% | 43.0% |
| 5047621 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.52 | 40.0 | 2.58e-01 | 97.4% | 17.4% |
| 3218481 | 109.4.1.369 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SNAPC1 | 0.51 | 37.0 | 2.70e-01 | 92.1% | 47.6% |
| 4032518 | 2003.1.7.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like | 0.51 | 40.0 | 2.59e-01 | 92.1% | 17.9% |
| 2050432 | 2007.1.14.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like | 0.50 | 36.0 | 2.47e-01 | 76.3% | 25.2% |