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MH937507.1__AZF92718.1__CHPC1152_0022__00022

Bact-Vir

MH937507.1__AZF92718.1__CHPC1152_0022__00022

Identity

Accession:
MH937507 ↗
Kingdom:
phage

Quality

92.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Aliceevansviridae› Brussowvirus› Streptococcus_phage_CHPC1152

TaxID: 2365029

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 23-119
PDB
Domain cluster: rep: NC_028805.1__YP_009199102.1__AVV11_gp150__00041__D695-776
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05895.18 best DUF859 156.2 1.90e-45 100.0% 15.5%
D2 high residues 125-228
PDB
Domain cluster: rep: IMGVR_UViG_3300018013_000490-3300018013-Ga0187873_100144020__D355-451
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05895.18 best DUF859 148.6 3.70e-43 100.0% 16.6%
D3 high residues 279-357
PDB
Domain cluster: rep: MW960037.1__QWY83581.1__X__00027__D159-241
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05895.18 best DUF859 123.2 1.80e-35 100.0% 12.0%
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wznA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.64 40.0 4.67e-01 72.2% 91.1%
7ob9B01 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.63 48.0 3.63e-01 87.3% 33.9%
3er7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 50.0 4.30e-01 86.1% 93.5%
5tz6B02 3.10.129.120 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › 0.60 49.0 3.98e-01 89.9% 89.0%
2xklA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 44.0 3.59e-01 82.3% 65.1%
3e29B00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 46.0 3.91e-01 89.9% 99.3%
1z4vA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.56 45.0 2.81e-01 88.6% 36.3%
6muwH00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.56 45.0 3.32e-01 86.1% 45.9%
4hj1A01 2.60.98.50 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › 0.55 48.0 3.84e-01 100.0% 61.4%
2ov9C01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 43.0 3.60e-01 88.6% 92.5%
7fisA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.54 45.0 3.18e-01 100.0% 44.4%
4dkkA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 42.0 4.35e-01 94.9% 91.9%
2kpnA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 41.0 4.15e-01 82.3% 90.9%
3c4bA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 38.0 4.07e-01 93.7% 91.0%
4fwwA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 46.0 2.88e-01 100.0% 48.0%
1wzlA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 44.0 3.88e-01 93.7% 80.2%
4wyqB00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 42.0 4.28e-01 93.7% 93.3%
1e69A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 42.0 2.86e-01 86.1% 38.0%
6cxhA03 2.60.40.1580 Mainly Beta › Sandwich › Immunoglobulin-like › Particulate methane monooxygenase, b subunit. Chain: A, domain 3 0.52 39.0 3.37e-01 83.5% 93.4%
3ktaA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 42.0 3.30e-01 87.3% 70.1%
5esyA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.51 42.0 3.20e-01 96.2% 85.0%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3973700 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.89 77.0 7.16e-01 100.0% 75.8%
2452960 520.1.1.0 ↗ beta sandwiches › gp9 N-terminal domain-like › gp9 N-terminal domain-related › gp9 N-terminal domain-related 0.81 76.0 7.23e-01 100.0% 96.7%
3969970 243.3.1.3 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.66 46.0 4.77e-01 96.2% 78.7%
4464658 274.1.1.59 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGG 0.63 54.0 4.77e-01 92.4% 64.9%
4079492 222.1.1.12 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH 0.62 50.0 3.81e-01 88.6% 74.2%
3703649 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.62 52.0 5.21e-01 100.0% 88.7%
3590849 222.1.1.1 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydratas 0.61 44.0 3.64e-01 75.9% 88.3%
3280401 243.3.1.3 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.61 44.0 4.81e-01 89.9% 93.8%
4012405 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.59 52.0 3.29e-01 100.0% 38.4%
4962446 298.3.1.3 ↗ a+b two layers › FwdE/GAPDH domain-like › Serine dehydratase beta chain-like › Serine dehydratase beta chain-like › MmgE_PrpD_C 0.59 43.0 3.60e-01 75.9% 95.4%
3923273 206.1.1.44 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF1679 0.56 49.0 3.07e-01 96.2% 37.5%
3726361 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 40.0 3.90e-01 78.5% 73.3%
3936801 10.1.1.91 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PF29324 0.54 46.0 3.24e-01 98.7% 38.5%
3924416 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.54 46.0 3.07e-01 93.7% 35.6%
5047049 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.53 43.0 2.53e-01 87.3% 18.8%
5077479 7504.1.1.2 ↗ a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T 0.53 45.0 3.49e-01 97.5% 91.4%
4971937 7504.1.1.2 ↗ a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T 0.53 45.0 3.64e-01 98.7% 97.6%
4260316 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.53 41.0 4.13e-01 93.7% 85.0%
3629963 330.1.1.6 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Staufen_C 0.53 43.0 4.04e-01 93.7% 72.7%
5069135 7504.1.1.2 ↗ a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T 0.52 44.0 3.44e-01 97.5% 88.1%
3617638 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.52 41.0 3.74e-01 93.7% 64.8%
2987310 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.52 40.0 3.65e-01 93.7% 62.0%
5000180 7504.1.1.2 ↗ a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T 0.51 43.0 3.45e-01 97.5% 82.4%
D4 high residues 365-469
PDB
Domain cluster: rep: MF580775.1__ATI20113.1__V2_018__00018__D13-86
D5 medium residues 235-265
PDB
Domain cluster: rep: MK448889.1__QBX25521.1__Javan262_0006__00028__D75-111
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05895.18 best DUF859 41.0 1.40e-10 100.0% 5.0%