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MK016491.1__AYQ99080.1__PBI_BABOJAY_91__00091

Bact-Vir

MK016491.1__AYQ99080.1__PBI_BABOJAY_91__00091

Identity

Accession:
MK016491 ↗
Kingdom:
phage

Quality

82.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Kostyavirus› Mycobacterium_phage_BaboJay

TaxID: 2484208

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 12-224
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF09414.16 best RNA_ligase 31.3 3.00e-07 88.3% 69.6%
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6imjA01 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.63 45.0 4.78e-01 88.7% 82.4%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995764 206.1.3.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp 0.85 69.0 6.67e-01 93.4% 75.3%
193072 206.1.3.23 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RNA_ligase 0.66 59.0 5.70e-01 92.5% 100.0%
3594967 206.1.3.70 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DUF7920 0.63 57.0 4.92e-01 93.9% 73.6%
4943522 206.1.3.23 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RNA_ligase 0.62 54.0 5.42e-01 92.5% 88.6%
3959836 327.11.2.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.51 14.0 2.68e-01 79.8% 80.0%