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MK034952.1__AZF87840.1__X__00001
Bact-VirMK034952.1__AZF87840.1__X__00001
Identity
- Accession:
- MK034952 ↗
- Kingdom:
- phage
Quality
91.4
mean pLDDT
Taxonomy
TaxID: 2483611
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-118
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5tseA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.70 | 39.0 | 3.69e-01 | 96.6% | 46.3% |
| 3ecrB03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.65 | 36.0 | 3.87e-01 | 100.0% | 62.7% |
| 3cxjA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.64 | 47.0 | 4.38e-01 | 98.3% | 61.8% |
| 7zqiA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 36.0 | 4.18e-01 | 100.0% | 80.2% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.61 | 36.0 | 3.28e-01 | 96.6% | 43.9% |
| 3bxoA02 | 2.20.130.10 | Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains | 0.61 | 30.0 | 4.17e-01 | 72.6% | 94.9% |
| 4bfiB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 33.0 | 3.71e-01 | 98.3% | 71.1% |
| 4g59C01 | 2.60.40.2920 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 33.0 | 3.56e-01 | 98.3% | 64.1% |
| 4bbyA05 | 3.30.300.330 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.58 | 42.0 | 4.36e-01 | 100.0% | 82.4% |
| 2bvfA03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.57 | 44.0 | 3.66e-01 | 100.0% | 45.7% |
| 3natA01 | 3.40.50.11250 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF3013 | 0.57 | 39.0 | 3.59e-01 | 97.4% | 55.1% |
| 2il5A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 50.0 | 4.57e-01 | 99.1% | 93.2% |
| 7wa9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 47.0 | 4.50e-01 | 99.1% | 99.3% |
| 2wqlA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 46.0 | 4.30e-01 | 99.1% | 96.7% |
| 2je8B05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 30.0 | 3.34e-01 | 96.6% | 70.8% |
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.52 | 38.0 | 3.01e-01 | 98.3% | 36.8% |
| 3tx8A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 42.0 | 4.32e-01 | 100.0% | 90.4% |
| 4xrtA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 46.0 | 4.30e-01 | 99.1% | 96.5% |
| 5uejA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 41.0 | 4.17e-01 | 100.0% | 89.5% |
| 3gkeA02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.50 | 44.0 | 3.69e-01 | 98.3% | 77.6% |
| 3p2mA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 36.0 | 2.68e-01 | 73.5% | 91.8% |
| 6h05A00 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.50 | 44.0 | 3.58e-01 | 100.0% | 84.3% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4980169 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.69 | 36.0 | 2.56e-01 | 100.0% | 17.3% |
| 3388283 | 7503.1.1.0 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain | 0.66 | 36.0 | 3.25e-01 | 98.3% | 38.7% |
| 3808882 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.61 | 34.0 | 2.99e-01 | 96.6% | 36.6% |
| 3431362 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.60 | 55.0 | 4.66e-01 | 98.3% | 90.8% |
| 4010883 | 331.3.1.10 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AtaL | 0.59 | 52.0 | 4.63e-01 | 97.4% | 92.9% |
| 3921186 | 67.1.1.1 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C | 0.59 | 43.0 | 4.20e-01 | 100.0% | 70.4% |
| 3451867 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.58 | 42.0 | 3.97e-01 | 85.5% | 62.1% |
| 3681942 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.57 | 52.0 | 4.22e-01 | 100.0% | 74.7% |
| 4970968 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.57 | 49.0 | 5.02e-01 | 100.0% | 94.7% |
| 5074212 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.56 | 49.0 | 5.12e-01 | 99.1% | 99.1% |
| 3254057 | 331.18.1.4 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B | 0.56 | 50.0 | 4.27e-01 | 100.0% | 61.0% |
| 1835333 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.56 | 45.0 | 4.49e-01 | 97.4% | 82.9% |
| 3440523 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.55 | 49.0 | 4.00e-01 | 100.0% | 75.1% |
| 4974181 | 331.3.1.74 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PF27226 | 0.53 | 35.0 | 3.85e-01 | 82.9% | 80.8% |
| 3306024 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.52 | 33.0 | 3.44e-01 | 96.6% | 67.3% |
| 3540888 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.52 | 44.0 | 3.85e-01 | 94.9% | 62.4% |
| 4984404 | 331.3.1.7 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG | 0.51 | 46.0 | 4.24e-01 | 99.1% | 98.0% |
| 3210904 | 12.6.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related | 0.51 | 41.0 | 3.93e-01 | 85.5% | 99.3% |
| 3701881 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.51 | 45.0 | 3.90e-01 | 100.0% | 74.7% |
| 3018445 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.51 | 44.0 | 3.60e-01 | 99.1% | 74.2% |
| 4071803 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.51 | 44.0 | 3.82e-01 | 98.3% | 82.1% |
| 3791021 | 5.1.3.135 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_KLHDC2_KLHL20_DRC7, Beta-prop_ATRN-LZTR1 | 0.50 | 36.0 | 2.75e-01 | 75.2% | 97.5% |
| 3601580 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.50 | 36.0 | 2.56e-01 | 72.6% | 29.9% |