←Back to structures

AZG03492.1

Arc-Vir

MK054219__AZG03492.1__X__00004

Identity

Accession:
MK054219 ↗
Protein ID:
AZG03492.1 ↗
Kingdom:
archaea

Quality

76.9 mean pLDDT

Taxonomy

Fuselloviridae› Alphafusellovirus› Sulfolobus_spindle-shaped_virus

TaxID: 2491899

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-43
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2lvhA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.88 78.0 7.66e-01 100.0% 91.1%
5vmzA03 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.85 75.0 7.65e-01 97.6% 100.0%
2d9hA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.73 54.0 4.49e-01 83.3% 53.8%
3hh2D03 3.30.60.30 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.71 52.0 5.34e-01 100.0% 89.7%
1wjvA01 3.30.1490.490 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.68 49.0 4.73e-01 100.0% 66.7%
2lcqA02 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.65 46.0 4.80e-01 100.0% 84.2%
4tpuA02 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.65 48.0 5.04e-01 100.0% 94.6%
3dadA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.63 53.0 3.20e-01 100.0% 13.0%
2cklB01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.62 53.0 4.53e-01 100.0% 63.4%
4jedA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 43.0 3.28e-01 83.3% 32.7%
3htkC02 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.55 44.0 4.15e-01 95.2% 83.3%
1jmtA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.53 37.0 3.12e-01 88.1% 56.1%
2ckaA01 3.40.5.120 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › 0.51 40.0 3.88e-01 95.2% 83.7%
ECOD (33)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3245932 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.95 83.0 8.11e-01 95.2% 93.3%
3483496 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.94 79.0 7.77e-01 100.0% 84.4%
3859106 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.90 80.0 7.85e-01 100.0% 91.1%
3617484 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.90 76.0 6.93e-01 100.0% 70.9%
3550310 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.90 78.0 8.04e-01 97.6% 100.0%
3713676 386.1.1.266 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF27771 0.90 72.0 6.49e-01 100.0% 65.5%
3581478 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.88 73.0 6.43e-01 100.0% 63.3%
3336399 386.1.1.63 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_3rep 0.88 75.0 6.41e-01 100.0% 60.0%
222312 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.88 78.0 7.66e-01 100.0% 91.1%
3750234 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.87 77.0 7.54e-01 100.0% 91.1%
3886999 386.1.1.20 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met 0.86 72.0 7.40e-01 92.9% 95.0%
3698302 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.86 73.0 6.70e-01 100.0% 72.7%
None — 0.85 70.0 6.19e-01 100.0% 63.3%
3407954 386.1.1.24 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_4 0.84 75.0 5.79e-01 100.0% 74.4%
3563232 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.84 76.0 6.91e-01 100.0% 76.4%
3236762 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.83 70.0 5.74e-01 92.9% 84.0%
3923587 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.83 73.0 7.15e-01 97.6% 93.3%
3766036 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.83 76.0 6.46e-01 100.0% 64.6%
3246264 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.82 70.0 6.37e-01 95.2% 98.2%
3408086 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.81 72.0 7.05e-01 100.0% 97.8%
3522638 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.80 68.0 6.98e-01 100.0% 97.5%
3504875 386.1.1.1 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.80 71.0 5.95e-01 100.0% 100.0%
3217481 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.79 67.0 6.84e-01 97.6% 97.5%
3904789 386.1.1.277 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF29496 0.79 66.0 6.77e-01 97.6% 97.5%
4988977 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.79 68.0 6.82e-01 100.0% 95.3%
3992020 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.77 69.0 6.49e-01 100.0% 84.0%
3796255 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.77 66.0 6.50e-01 100.0% 93.3%
4003280 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.76 62.0 6.38e-01 92.9% 97.5%
3750225 386.1.1.244 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-met 0.75 65.0 5.90e-01 95.2% 100.0%
4885815 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.61 41.0 3.86e-01 71.4% 58.2%
4443862 219.1.1.19 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C54 0.57 46.0 2.83e-01 100.0% 77.4%
3601696 375.1.1.18 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › SIR2 0.53 45.0 3.48e-01 100.0% 71.0%
3587273 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 43.0 3.91e-01 100.0% 83.3%