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AZI75826.1

Arc-Vir

MK064563__AZI75826.1__SBFV2-gp59__00059

Identity

Accession:
MK064563 ↗
Protein ID:
AZI75826.1 ↗
Kingdom:
archaea

Quality

74.7 mean pLDDT

Taxonomy

Zilligvirae› Taleaviricota› Tokiviricetes› Ligamenvirales› Lipothrixviridae› Alphalipothrixvirus› Sulfolobales_Beppu_filamentous_virus_2

TaxID: 2493123

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 29-126
PDB
Domain cluster: rep: IMGVR_UViG_3300010237_000005-3300010237-Ga0136250_1000003943__D12-99
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1o7iB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 45.0 4.29e-01 100.0% 62.3%
2k75A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 43.0 4.24e-01 100.0% 65.0%
5fgoA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 33.0 4.06e-01 76.5% 79.0%
1srqA01 3.30.1120.160 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.60 35.0 3.10e-01 90.8% 39.1%
2k50A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 47.0 4.63e-01 100.0% 78.8%
4cgyA03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.58 44.0 4.06e-01 95.9% 61.7%
1xteA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.53 46.0 4.42e-01 98.0% 98.3%
4dduA07 2.60.510.20 Mainly Beta › Sandwich › EV matrix protein fold › 0.52 46.0 4.48e-01 95.9% 91.6%
2dc1A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.52 38.0 3.83e-01 94.9% 76.2%
4oxwA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.51 45.0 4.44e-01 96.9% 100.0%
6iccA02 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.51 32.0 3.47e-01 85.7% 74.4%
1gkuB07 2.60.510.20 Mainly Beta › Sandwich › EV matrix protein fold › 0.50 43.0 4.26e-01 93.9% 95.1%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3583313 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.67 36.0 3.24e-01 73.5% 38.5%
3627952 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.64 57.0 4.45e-01 99.0% 78.6%
3603237 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 47.0 4.66e-01 100.0% 74.3%
4969403 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.62 45.0 4.03e-01 96.9% 56.2%
3289254 220.1.1.82 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_6 0.61 38.0 3.94e-01 84.7% 64.2%
5056966 264.2.1.1 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.61 45.0 4.18e-01 96.9% 62.5%
5055120 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.60 44.0 4.19e-01 95.9% 65.2%
4558873 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.60 47.0 4.03e-01 95.9% 52.9%
3590584 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.59 46.0 4.14e-01 94.9% 60.7%
4272864 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.58 46.0 4.30e-01 100.0% 68.3%
5082511 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 44.0 4.36e-01 100.0% 78.1%
4954871 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.54 39.0 3.72e-01 95.9% 64.3%
5021275 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 47.0 4.52e-01 100.0% 88.2%
4106730 264.2.1.1 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.51 46.0 4.13e-01 96.9% 90.4%
5029914 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.51 30.0 3.66e-01 80.6% 100.0%
4965259 218.1.1.5 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MenC_N 0.51 45.0 4.51e-01 98.0% 98.0%
4137393 330.1.1.4 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Rad52_Rad22 0.51 36.0 3.15e-01 95.9% 48.7%
3222596 264.2.1.1 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.50 44.0 3.98e-01 95.9% 86.7%
5023510 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.50 42.0 2.95e-01 93.9% 77.3%