←Back to structures
AZI75845.1
Arc-VirMK064564__AZI75845.1__SBFV3-gp10__00010
Identity
- Accession:
- MK064564 ↗
- Protein ID:
- AZI75845.1 ↗
- Kingdom:
- archaea
Quality
78.9
mean pLDDT
Taxonomy
Zilligvirae›
Taleaviricota›
Tokiviricetes›
Ligamenvirales›
Lipothrixviridae›
Deltalipothrixvirus›
Sulfolobales_Beppu_filamentous_virus_3
TaxID: 2493124
Cluster
View cluster (12 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 36-127
Domain cluster:
rep: MK064566__AZI75968.1__SBV1-gp19__00019__D34-114
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d2lA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.73 | 32.0 | 3.80e-01 | 100.0% | 58.7% |
| 1nh2C00 | 2.30.18.10 | Mainly Beta › Roll › TATA box binding Protein, subunit D; domain 2 › Transcription factor IIA (TFIIA), beta-barrel domain | 0.68 | 35.0 | 4.57e-01 | 87.0% | 92.0% |
| 1x6oA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 52.0 | 5.55e-01 | 96.7% | 98.7% |
| 2b39A13 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.64 | 57.0 | 4.98e-01 | 97.8% | 69.1% |
| 6mavB02 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.64 | 55.0 | 5.70e-01 | 96.7% | 98.9% |
| 1jkfA03 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.63 | 32.0 | 3.83e-01 | 77.2% | 73.3% |
| 1jb3A00 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 54.0 | 4.90e-01 | 97.8% | 78.7% |
| 1xjvA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 55.0 | 4.70e-01 | 98.9% | 81.2% |
| 3kojB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 51.0 | 5.19e-01 | 96.7% | 95.6% |
| 1xweA01 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 52.0 | 4.55e-01 | 97.8% | 66.4% |
| 2gcjA01 | 2.30.29.150 | Mainly Beta › Roll › PH-domain like › | 0.59 | 41.0 | 3.69e-01 | 72.8% | 86.6% |
| 3bioA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.59 | 30.0 | 2.80e-01 | 98.9% | 36.8% |
| 4gs3A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 51.0 | 5.16e-01 | 98.9% | 98.9% |
| 4ioyX01 | 2.30.29.150 | Mainly Beta › Roll › PH-domain like › | 0.58 | 40.0 | 3.66e-01 | 72.8% | 72.7% |
| 5gqoA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 50.0 | 4.91e-01 | 98.9% | 90.7% |
| 1rwzA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.57 | 51.0 | 3.73e-01 | 97.8% | 41.4% |
| 6j8yA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.57 | 50.0 | 3.66e-01 | 97.8% | 42.4% |
| 4rlzA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.57 | 42.0 | 4.03e-01 | 79.3% | 100.0% |
| 4ifsA01 | 2.30.29.150 | Mainly Beta › Roll › PH-domain like › | 0.57 | 39.0 | 3.56e-01 | 72.8% | 87.9% |
| 3fhwA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 50.0 | 4.92e-01 | 98.9% | 94.9% |
| 4tr6A01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.56 | 49.0 | 3.94e-01 | 96.7% | 61.7% |
| 6ap4B02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.56 | 49.0 | 4.26e-01 | 97.8% | 75.9% |
| 3nwsA01 | 2.40.50.800 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 50.0 | 4.35e-01 | 100.0% | 87.9% |
| 1tvcA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.56 | 40.0 | 3.80e-01 | 75.0% | 88.1% |
| 2w4yA00 | 2.40.160.220 | Mainly Beta › Beta Barrel › Porin › | 0.55 | 31.0 | 2.82e-01 | 100.0% | 41.8% |
| 3o2zF00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 43.0 | 4.60e-01 | 95.7% | 100.0% |
| 3fssA01 | 2.30.29.120 | Mainly Beta › Roll › PH-domain like › | 0.55 | 38.0 | 3.44e-01 | 73.9% | 87.5% |
| 2ix2A01 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.54 | 47.0 | 3.57e-01 | 97.8% | 45.2% |
| 2giaA00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.53 | 37.0 | 3.10e-01 | 70.7% | 79.9% |
| 4wqmA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.53 | 39.0 | 3.88e-01 | 79.3% | 93.9% |
| 3iuzA00 | 3.10.180.50 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › | 0.51 | 38.0 | 2.71e-01 | 80.4% | 72.2% |
| 5dm6H00 | 2.40.150.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L14 › Ribosomal protein L14/L23 | 0.51 | 42.0 | 3.75e-01 | 90.2% | 92.5% |
| 3rmhB00 | 2.40.50.810 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 44.0 | 3.96e-01 | 98.9% | 97.7% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3254881 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 44.0 | 4.86e-01 | 96.7% | 76.0% |
| 3774286 | 2.3.1.2 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like › NTR | 0.67 | 56.0 | 4.89e-01 | 96.7% | 61.9% |
| 3573692 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 58.0 | 5.35e-01 | 98.9% | 78.2% |
| 3905339 | 2.3.1.2 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like › NTR | 0.65 | 57.0 | 5.17e-01 | 98.9% | 72.4% |
| 5037223 | 2.1.1.12 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S28e | 0.64 | 38.0 | 4.52e-01 | 77.2% | 90.0% |
| 3626705 | 2.3.1.3 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like › NtA | 0.64 | 55.0 | 5.01e-01 | 96.7% | 71.7% |
| 4164502 | 2.3.1.1 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like › TIMP | 0.64 | 57.0 | 4.50e-01 | 97.8% | 50.3% |
| 3589263 | 2.1.1.222 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_YrrC | 0.63 | 51.0 | 5.43e-01 | 96.7% | 100.0% |
| 3689454 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 48.0 | 4.59e-01 | 83.7% | 74.5% |
| 3858483 | 2.1.1.72 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › POT1PC | 0.62 | 56.0 | 4.60e-01 | 98.9% | 77.5% |
| 4337719 | 2.3.1.3 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like › NtA | 0.60 | 53.0 | 4.74e-01 | 97.8% | 78.5% |
| 3328224 | 4.1.1.336 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7699 | 0.60 | 46.0 | 4.14e-01 | 100.0% | 58.5% |
| 4941652 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.59 | 45.0 | 4.03e-01 | 100.0% | 58.4% |
| 3712376 | 2.1.1.225 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30388 | 0.58 | 51.0 | 4.70e-01 | 97.8% | 87.5% |
| 5035282 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.58 | 45.0 | 4.05e-01 | 100.0% | 60.0% |
| 4296288 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.58 | 51.0 | 4.95e-01 | 98.9% | 98.1% |
| 3599571 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 50.0 | 4.71e-01 | 97.8% | 91.3% |
| 4937878 | 2.3.1.0 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like | 0.58 | 45.0 | 4.67e-01 | 89.1% | 90.6% |
| 4204046 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.57 | 43.0 | 3.97e-01 | 100.0% | 60.8% |
| 3473720 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.57 | 51.0 | 4.80e-01 | 97.8% | 93.6% |
| 3903211 | 2.1.1.261 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › NRG2_N | 0.57 | 50.0 | 5.05e-01 | 100.0% | 97.8% |
| 3690510 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.57 | 51.0 | 4.80e-01 | 98.9% | 93.6% |
| 4941831 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.57 | 44.0 | 3.89e-01 | 100.0% | 57.7% |
| 5037168 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.57 | 50.0 | 4.56e-01 | 98.9% | 85.6% |
| 4215369 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.56 | 42.0 | 3.82e-01 | 100.0% | 58.4% |
| 4025470 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 46.0 | 4.43e-01 | 100.0% | 96.2% |
| 3719897 | 227.1.1.18 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DUF7881_C | 0.52 | 44.0 | 4.08e-01 | 97.8% | 84.0% |
| 5080880 | 11.1.1.608 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Por_Secre_tail | 0.52 | 35.0 | 3.55e-01 | 97.8% | 70.0% |
| 4982275 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 43.0 | 3.85e-01 | 93.5% | 88.9% |
| 432602 | 2.1.1.93 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Cdc13_OB4_dimer | 0.51 | 44.0 | 3.96e-01 | 98.9% | 97.7% |