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AZI75886.1
Arc-VirMK064564__AZI75886.1__SBFV3-gp51__00051
Identity
- Accession:
- MK064564 ↗
- Protein ID:
- AZI75886.1 ↗
- Kingdom:
- archaea
Quality
73.0
mean pLDDT
Taxonomy
Zilligvirae›
Taleaviricota›
Tokiviricetes›
Ligamenvirales›
Lipothrixviridae›
Deltalipothrixvirus›
Sulfolobales_Beppu_filamentous_virus_3
TaxID: 2493124
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-115
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4n4rB00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.73 | 58.0 | 5.19e-01 | 93.5% | 60.3% |
| 5tseA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.71 | 55.0 | 5.08e-01 | 90.7% | 64.0% |
| 2n8xA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.70 | 59.0 | 5.10e-01 | 97.2% | 58.4% |
| 3bf2A00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.70 | 54.0 | 5.11e-01 | 93.5% | 69.6% |
| 2r76A00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.68 | 55.0 | 5.21e-01 | 97.2% | 72.7% |
| 3uezC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 41.0 | 4.67e-01 | 90.7% | 86.7% |
| 1fx3B00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.63 | 50.0 | 4.46e-01 | 90.7% | 60.4% |
| 1dwnA00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.60 | 46.0 | 4.37e-01 | 80.4% | 69.3% |
| 4kwyA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.60 | 50.0 | 4.63e-01 | 99.1% | 71.5% |
| 3pg6B00 | 3.30.390.130 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.55 | 44.0 | 4.07e-01 | 84.1% | 67.2% |
| 1xkwA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.55 | 42.0 | 2.73e-01 | 93.5% | 16.5% |
| 3gwrB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 31.0 | 2.93e-01 | 70.1% | 44.9% |
| 2hngA00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.54 | 45.0 | 4.33e-01 | 93.5% | 80.8% |
| 2kl6A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 41.0 | 4.18e-01 | 92.5% | 81.5% |
| 1fepA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.54 | 46.0 | 2.96e-01 | 95.3% | 34.7% |
| 4bj8K00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.53 | 31.0 | 3.05e-01 | 78.5% | 49.2% |
| 1jkgA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 30.0 | 2.79e-01 | 72.0% | 41.7% |
| 4e6fA00 | 3.30.530.80 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › | 0.52 | 40.0 | 3.41e-01 | 81.3% | 93.6% |
| 4k7rA02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.52 | 32.0 | 3.60e-01 | 82.2% | 84.4% |
| 1ek9A00 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.52 | 48.0 | 3.12e-01 | 100.0% | 29.0% |
| 5hdwA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.51 | 45.0 | 4.25e-01 | 96.3% | 81.7% |
| 5ig0A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 32.0 | 3.01e-01 | 74.8% | 49.6% |
| 2f1eA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.51 | 42.0 | 4.10e-01 | 89.7% | 89.7% |
| 2wyoD02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.50 | 36.0 | 3.51e-01 | 75.7% | 67.7% |
| 4uxuA00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.50 | 37.0 | 3.04e-01 | 78.5% | 60.0% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4116373 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.79 | 60.0 | 3.89e-01 | 79.4% | 84.8% |
| 4880355 | 11.1.1.11 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Usher | 0.76 | 39.0 | 3.87e-01 | 76.6% | 47.7% |
| 4540264 | 504.1.1.1 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB | 0.71 | 57.0 | 5.09e-01 | 86.0% | 70.7% |
| 4976732 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.68 | 55.0 | 3.80e-01 | 87.9% | 26.4% |
| 4966376 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.68 | 56.0 | 3.95e-01 | 88.8% | 44.5% |
| 3373981 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.67 | 43.0 | 3.35e-01 | 78.5% | 30.9% |
| 4981268 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.66 | 52.0 | 3.87e-01 | 87.9% | 33.8% |
| 5063899 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.66 | 51.0 | 4.01e-01 | 86.0% | 40.0% |
| 3716267 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.65 | 45.0 | 3.17e-01 | 70.1% | 29.9% |
| 4950971 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.64 | 53.0 | 3.74e-01 | 88.8% | 41.2% |
| 4037556 | 504.1.1.1 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB | 0.64 | 52.0 | 4.70e-01 | 87.9% | 64.3% |
| 3249225 | 223.2.1.6 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN | 0.64 | 45.0 | 3.95e-01 | 85.0% | 48.8% |
| 4966638 | 881.1.1.44 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF6517 | 0.63 | 42.0 | 3.41e-01 | 72.9% | 36.9% |
| 3900258 | 3169.1.1.1 ↗ | a+b two layers › Carboxyl terminal domain of human deltex 3-like › Carboxyl terminal domain of human deltex 3-like › Carboxyl terminal domain of human deltex 3-like › DTC | 0.63 | 45.0 | 4.24e-01 | 86.0% | 61.7% |
| 4985492 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.63 | 52.0 | 3.87e-01 | 88.8% | 42.2% |
| 4477878 | 7504.1.1.1 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Ham1p_like | 0.63 | 52.0 | 4.04e-01 | 90.7% | 66.4% |
| 3718960 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.62 | 55.0 | 4.46e-01 | 99.1% | 54.8% |
| 4016816 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.62 | 42.0 | 4.61e-01 | 75.7% | 87.1% |
| 5065294 | 4051.1.1.0 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz | 0.61 | 49.0 | 4.23e-01 | 88.8% | 55.3% |
| 5020942 | 7503.1.1.0 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain | 0.60 | 49.0 | 4.26e-01 | 89.7% | 91.8% |
| 4429278 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.60 | 53.0 | 3.49e-01 | 95.3% | 81.6% |
| 4340146 | 327.16.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin | 0.60 | 40.0 | 3.29e-01 | 87.9% | 36.1% |
| 3671408 | 11.1.1.80 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRAP_beta | 0.59 | 51.0 | 4.41e-01 | 92.5% | 69.4% |
| 3721048 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 51.0 | 4.94e-01 | 93.5% | 88.3% |
| 3442957 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 53.0 | 4.83e-01 | 98.1% | 94.3% |
| 3995523 | 223.2.1.4 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN | 0.57 | 41.0 | 3.52e-01 | 75.7% | 47.1% |
| 4013561 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 48.0 | 4.54e-01 | 90.7% | 89.6% |
| 3623034 | 223.2.1.6 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN | 0.57 | 41.0 | 3.41e-01 | 75.7% | 42.6% |
| 3952161 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.57 | 47.0 | 4.17e-01 | 91.6% | 69.4% |
| 3978125 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.56 | 51.0 | 3.41e-01 | 100.0% | 70.7% |
| 5054725 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.55 | 44.0 | 4.33e-01 | 88.8% | 79.2% |
| 3653604 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.54 | 38.0 | 3.46e-01 | 85.0% | 51.0% |
| 5796 | 504.1.1.2 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › DUF1149 | 0.54 | 45.0 | 4.34e-01 | 93.5% | 81.5% |
| 3391818 | 3070.2.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain | 0.54 | 36.0 | 3.72e-01 | 88.8% | 73.7% |
| 4013757 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 48.0 | 4.16e-01 | 100.0% | 84.8% |
| 3164124 | 5084.1.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity | 0.53 | 39.0 | 3.83e-01 | 77.6% | 71.7% |
| 4320352 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.53 | 49.0 | 3.23e-01 | 100.0% | 29.2% |
| 3638233 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.52 | 41.0 | 3.96e-01 | 85.0% | 100.0% |
| 3786844 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 44.0 | 4.18e-01 | 91.6% | 81.6% |
| 5080405 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.51 | 39.0 | 3.39e-01 | 80.4% | 89.0% |
| 4635523 | 331.3.1.20 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C | 0.51 | 39.0 | 2.97e-01 | 81.3% | 73.7% |
| 3553322 | 5089.1.1.3 ↗ | beta complex topology › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Gasdermin | 0.50 | 45.0 | 3.47e-01 | 99.1% | 53.1% |
| 3484323 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.50 | 45.0 | 3.92e-01 | 99.1% | 83.1% |