←Back to structures
AZI75887.1
Arc-VirMK064564__AZI75887.1__SBFV3-gp52__00052
Identity
- Accession:
- MK064564 ↗
- Protein ID:
- AZI75887.1 ↗
- Kingdom:
- archaea
Quality
84.9
mean pLDDT
Taxonomy
Zilligvirae›
Taleaviricota›
Tokiviricetes›
Ligamenvirales›
Lipothrixviridae›
Deltalipothrixvirus›
Sulfolobales_Beppu_filamentous_virus_3
TaxID: 2493124
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-107
Domain cluster:
rep: MK064566__AZI75990.1__SBV1-gp41__00041__D3-97
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2l3tA02 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.54 | 30.0 | 3.13e-01 | 79.8% | 56.0% |
| 2jozA01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 43.0 | 4.50e-01 | 86.5% | 93.8% |
| 8bs9A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.54 | 41.0 | 3.07e-01 | 83.7% | 84.3% |
| 2wxwA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.53 | 42.0 | 3.69e-01 | 85.6% | 84.8% |
| 2xcmC00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 38.0 | 4.01e-01 | 80.8% | 83.7% |
| 7vljA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.51 | 39.0 | 4.15e-01 | 81.7% | 97.8% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2325417 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.69 | 49.0 | 5.29e-01 | 100.0% | 89.7% |
| 3229412 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.61 | 44.0 | 4.40e-01 | 74.0% | 94.3% |
| 3211804 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.61 | 50.0 | 3.66e-01 | 87.5% | 39.9% |
| 3215840 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.60 | 44.0 | 3.20e-01 | 75.0% | 34.2% |
| 3652840 | 708.1.1.9 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › CG-1 | 0.59 | 40.0 | 4.40e-01 | 76.9% | 84.7% |
| 5024840 | 267.1.1.0 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain | 0.57 | 44.0 | 4.62e-01 | 85.6% | 89.5% |
| 3245992 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.57 | 41.0 | 3.01e-01 | 75.0% | 40.0% |
| 4147965 | 2484.1.1.36 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 | 0.57 | 35.0 | 2.61e-01 | 99.0% | 25.6% |
| 3689743 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.56 | 38.0 | 3.23e-01 | 71.2% | 90.0% |
| 5047859 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.54 | 35.0 | 4.19e-01 | 77.9% | 97.1% |
| 3784539 | 214.1.1.6 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2_2 | 0.54 | 30.0 | 3.03e-01 | 79.8% | 50.9% |
| 3466857 | 2484.1.1.110 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MULE | 0.54 | 41.0 | 3.22e-01 | 93.3% | 39.1% |
| 3946452 | 213.1.1.31 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_10 | 0.52 | 34.0 | 3.13e-01 | 97.1% | 50.0% |
| 4990127 | 11.31.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Beta-galactosidase LacA beta-sandwich domain › Beta-galactosidase LacA beta-sandwich domain | 0.51 | 35.0 | 3.56e-01 | 98.1% | 71.4% |
| 3830571 | 844.1.1.5 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › DUF3527 | 0.51 | 40.0 | 3.27e-01 | 87.5% | 96.2% |
| 4074315 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.50 | 36.0 | 2.99e-01 | 73.1% | 86.3% |