AZI75901.1

Arc-Vir

MK064565__AZI75901.1__SBRV1-gp12__00012

Identity

Accession:: MK064565 ↗
Protein ID:: AZI75901.1 ↗
Kingdom:: archaea

Quality

86.4 mean pLDDT

Taxonomy

Zilligvirae› Taleaviricota› Tokiviricetes› Ligamenvirales› Rudiviridae› Japarudivirus› Sulfolobales_Beppu_rod-shaped_virus_1

TaxID: 2493121

Cluster

View cluster (19 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-93

PDB

Domain cluster: representative

CATH (12)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2efvA00	3.30.70.3260	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Uncharacterised protein PF10802, DUF2540	0.76	62.0	6.50e-01	100.0%	95.1%
2rh3A00	1.10.1220.190	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › VirC2, RHH domain	0.66	58.0	5.29e-01	100.0%	95.9%
2dy1A03	3.30.70.870	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3	0.55	37.0	3.93e-01	97.8%	80.3%
1vq0A02	3.90.1280.10	Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like	0.54	25.0	3.03e-01	87.6%	64.9%
2xhcA01	3.30.70.940	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain	0.52	36.0	3.58e-01	97.8%	67.4%
4qbuA03	3.30.70.250	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding	0.52	34.0	3.86e-01	87.6%	92.4%
5l3wA01	1.20.120.140	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain	0.52	33.0	3.43e-01	100.0%	69.0%
4e9jA02	3.30.1370.120	Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 ›	0.52	36.0	3.99e-01	95.5%	94.2%
6zbyD01	3.60.110.10	Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase	0.51	40.0	2.86e-01	84.3%	74.6%
3ubcA00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.51	41.0	3.69e-01	89.9%	80.2%
4qmfB01	3.30.1370.10	Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1	0.51	38.0	3.92e-01	96.6%	86.6%
1j4wA01	3.30.1370.10	Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1	0.50	38.0	4.16e-01	100.0%	98.6%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5016958	101.1.11.17 ↗	alpha arrays › HTH › HTH › Ribbon-helix-helix › DUF2540	0.77	62.0	6.53e-01	100.0%	97.5%
4373529	101.1.11.43 ↗	alpha arrays › HTH › HTH › Ribbon-helix-helix › TraY	0.72	65.0	6.25e-01	100.0%	99.0%
3243442	101.1.11.0 ↗	alpha arrays › HTH › HTH › Ribbon-helix-helix	0.66	57.0	5.23e-01	100.0%	79.8%
3780254	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.60	44.0	3.36e-01	78.7%	52.4%
3600584	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.59	43.0	3.17e-01	77.5%	56.7%
3788423	604.1.1.132 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › KAR9	0.54	37.0	3.56e-01	70.8%	91.4%
3378555	4133.1.1.2 ↗	alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Tic110	0.54	41.0	3.33e-01	80.9%	55.1%
3612600	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.53	39.0	2.90e-01	79.8%	39.2%
3606376	304.55.2.8 ↗	a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › FAZ1_cons	0.52	44.0	4.24e-01	100.0%	81.0%
3605783	304.109.1.14 ↗	a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › FAZ1_cons	0.51	44.0	4.18e-01	100.0%	82.9%
3195474	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.50	39.0	2.72e-01	84.3%	75.2%