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MK069556.2__AZF88152.1__X__00046
Bact-VirMK069556.2__AZF88152.1__X__00046
Identity
- Accession:
- MK069556 ↗
- Kingdom:
- phage
Quality
90.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-51
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bxwA03 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.72 | 48.0 | 4.58e-01 | 70.2% | 100.0% |
| 3puaA01 | 2.60.120.650 | Mainly Beta › Sandwich › Jelly Rolls › Cupin | 0.66 | 56.0 | 3.49e-01 | 100.0% | 60.8% |
| 1jqpA02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.65 | 54.0 | 3.53e-01 | 97.9% | 52.6% |
| 3mhsA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.63 | 52.0 | 3.94e-01 | 100.0% | 37.0% |
| 2ckaA01 | 3.40.5.120 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › | 0.62 | 45.0 | 4.50e-01 | 80.9% | 87.8% |
| 2e45A01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.61 | 34.0 | 3.74e-01 | 87.2% | 95.7% |
| 2j9uB00 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.61 | 41.0 | 4.11e-01 | 70.2% | 97.9% |
| 6inxA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.59 | 39.0 | 3.66e-01 | 70.2% | 96.9% |
| 2lvhA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.58 | 40.0 | 4.14e-01 | 74.5% | 86.7% |
| 1wjvA01 | 3.30.1490.490 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.57 | 48.0 | 4.69e-01 | 95.7% | 88.2% |
| 2okxA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 44.0 | 3.17e-01 | 97.9% | 75.9% |
| 1p2fA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 33.0 | 2.68e-01 | 97.9% | 24.2% |
| 4tpuA02 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.53 | 38.0 | 4.13e-01 | 78.7% | 97.3% |
| 2cklB01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 37.0 | 3.26e-01 | 74.5% | 69.0% |
| 5trbA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 36.0 | 3.21e-01 | 74.5% | 66.7% |
| 1kfwA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.52 | 41.0 | 3.86e-01 | 95.7% | 96.8% |
| 3c0fB00 | 3.30.1490.340 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.51 | 36.0 | 3.01e-01 | 76.6% | 54.1% |
| 5z9iA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.51 | 37.0 | 2.26e-01 | 80.9% | 80.3% |
| 3u31A02 | 3.30.1600.10 | Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' | 0.51 | 43.0 | 3.45e-01 | 100.0% | 46.5% |
| 1p9bA03 | 3.90.170.10 | Alpha Beta › Alpha-Beta Complex › Adenylosuccinate Synthetase; Chain A, domain 3 › Adenylosuccinate Synthetase, subunit A, domain 3 | 0.51 | 35.0 | 2.51e-01 | 78.7% | 20.7% |
| 2cklA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.50 | 36.0 | 2.90e-01 | 74.5% | 52.0% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4519945 | 101.1.14.4 ↗ | alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › PF31232 | 0.73 | 50.0 | 4.84e-01 | 72.3% | 100.0% |
| 4655745 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.67 | 47.0 | 3.69e-01 | 74.5% | 97.0% |
| 3719787 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 44.0 | 4.72e-01 | 70.2% | 100.0% |
| 3415761 | 7056.1.1.3 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zn_ribbon_SprT | 0.66 | 49.0 | 4.83e-01 | 80.9% | 96.0% |
| 4021767 | 7056.1.1.3 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zn_ribbon_SprT | 0.65 | 43.0 | 4.58e-01 | 70.2% | 95.0% |
| 2664911 | 2484.1.1.53 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MreB_Mbl | 0.63 | 46.0 | 3.36e-01 | 80.9% | 29.8% |
| 3650874 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.63 | 51.0 | 3.69e-01 | 93.6% | 90.0% |
| 4026823 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 43.0 | 4.44e-01 | 72.3% | 100.0% |
| 3236762 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.61 | 36.0 | 3.05e-01 | 95.7% | 36.0% |
| 2393285 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 45.0 | 3.68e-01 | 80.9% | 71.4% |
| 2530280 | 284.2.1.0 ↗ | a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain | 0.61 | 43.0 | 3.95e-01 | 74.5% | 98.4% |
| 5057952 | 375.1.1.325 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › OapC | 0.59 | 42.0 | 3.85e-01 | 78.7% | 55.4% |
| 5022231 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 49.0 | 3.72e-01 | 100.0% | 62.4% |
| 3276203 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.58 | 41.0 | 2.97e-01 | 76.6% | 76.2% |
| 3911109 | 386.1.1.290 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Zf-C2H2_ZNF451_C | 0.57 | 47.0 | 4.00e-01 | 97.9% | 55.3% |
| 4583179 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 42.0 | 4.04e-01 | 83.0% | 100.0% |
| 3914802 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 46.0 | 4.18e-01 | 95.7% | 81.5% |
| 3496998 | 260.1.1.0 ↗ | a+b duplicates or obligate multimers › beta-hairpin-alpha-hairpin repeat › beta-hairpin-alpha-hairpin repeat › beta-hairpin-alpha-hairpin repeat | 0.56 | 39.0 | 2.54e-01 | 76.6% | 23.3% |
| 3973921 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.53 | 44.0 | 3.43e-01 | 95.7% | 59.1% |
| 3853799 | 386.1.1.290 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Zf-C2H2_ZNF451_C | 0.52 | 41.0 | 3.72e-01 | 97.9% | 76.0% |
| 4271737 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.52 | 37.0 | 3.06e-01 | 74.5% | 60.0% |
| 3256523 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.52 | 36.0 | 3.11e-01 | 74.5% | 62.7% |
| 3339917 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.51 | 38.0 | 3.46e-01 | 95.7% | 80.0% |