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MK075004.1__AZB66689.1__X__00006
Bact-VirMK075004.1__AZB66689.1__X__00006
Identity
- Accession:
- MK075004 ↗
- Kingdom:
- phage
Quality
79.0
mean pLDDT
Taxonomy
TaxID: 2491316
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-92
Domain cluster:
rep: NC_048644.1__YP_009831014.1__HWA99_gp64__00064__D115-191
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nzcB00 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.62 | 38.0 | 3.90e-01 | 89.0% | 63.0% |
| 6az1E03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 42.0 | 4.43e-01 | 95.1% | 79.2% |
| 5yppA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 38.0 | 3.76e-01 | 89.0% | 56.7% |
| 6euaA01 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.62 | 44.0 | 3.67e-01 | 100.0% | 43.9% |
| 2go9A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 36.0 | 3.77e-01 | 87.8% | 63.6% |
| 1t7vA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 39.0 | 3.82e-01 | 93.9% | 63.3% |
| 4h4nA00 | 2.60.40.3750 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 38.0 | 4.26e-01 | 98.8% | 88.7% |
| 1f0xA04 | 3.30.1370.20 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › D-lactate dehydrogenase, cap domain, subdomain 2 | 0.56 | 42.0 | 4.23e-01 | 100.0% | 78.8% |
| 4qqgG00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 42.0 | 4.41e-01 | 100.0% | 94.4% |
| 2xklA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 47.0 | 3.96e-01 | 100.0% | 71.1% |
| 4u9rA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 37.0 | 3.75e-01 | 90.2% | 72.0% |
| 1vybA00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.53 | 45.0 | 3.24e-01 | 92.7% | 100.0% |
| 4wsfA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 42.0 | 3.92e-01 | 90.2% | 75.7% |
| 2fb0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 41.0 | 4.00e-01 | 93.9% | 75.5% |
| 1w4sA00 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.52 | 45.0 | 3.73e-01 | 95.1% | 87.0% |
| 2vrwB02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 44.0 | 3.91e-01 | 93.9% | 63.6% |
| 2kjwA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.52 | 38.0 | 3.70e-01 | 93.9% | 68.8% |
| 6p3xB01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.51 | 38.0 | 2.92e-01 | 90.2% | 36.2% |
| 1tz0B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 38.0 | 3.66e-01 | 93.9% | 71.1% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5271 | 304.8.1.18 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › TM1266-like | 0.62 | 38.0 | 3.92e-01 | 89.0% | 63.7% |
| 3630503 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.61 | 39.0 | 3.92e-01 | 87.8% | 63.5% |
| 5024617 | 4.15.1.2 ↗ | beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 | 0.58 | 50.0 | 4.79e-01 | 100.0% | 81.1% |
| 5026284 | 4.15.1.2 ↗ | beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 | 0.58 | 49.0 | 4.72e-01 | 100.0% | 81.1% |
| 3214689 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.58 | 37.0 | 3.63e-01 | 87.8% | 60.0% |
| 4209058 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.57 | 43.0 | 4.04e-01 | 97.6% | 66.0% |
| 4642857 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 47.0 | 4.83e-01 | 98.8% | 95.0% |
| 3495447 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.56 | 42.0 | 3.70e-01 | 100.0% | 54.2% |
| 3935716 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.55 | 43.0 | 4.45e-01 | 100.0% | 90.7% |
| 4952973 | 4.15.1.0 ↗ | beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like | 0.55 | 50.0 | 4.88e-01 | 100.0% | 92.2% |
| 4933937 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 36.0 | 3.43e-01 | 89.0% | 56.0% |
| 4932705 | 230.2.1.1 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C | 0.51 | 45.0 | 3.90e-01 | 97.6% | 79.2% |
| 3670468 | 4.1.1.332 ↗ | beta barrels › SH3 › SH3 › SH3 › Peptidase_C1 | 0.50 | 44.0 | 3.82e-01 | 100.0% | 65.4% |