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MK075005.1__AZB66757.1__X__00011

Bact-Vir

MK075005.1__AZB66757.1__X__00011

Identity

Accession:
MK075005 ↗
Kingdom:
phage

Quality

89.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Triavirus› Staphylococcus_phage_phiSP119-2

TaxID: 2491317

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-67_133-155
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ci0J02 2.10.70.20 Mainly Beta › Ribbon › Complement Module; domain 1 › gspk-gspi-gspj complex like domains 0.61 26.0 3.32e-01 76.7% 66.0%
4jzjC03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 34.0 3.82e-01 100.0% 74.3%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 37.0 4.23e-01 94.4% 89.4%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 29.0 3.77e-01 87.8% 100.0%
3hisA02 4.10.470.10 Few Secondary Structures › Irregular › Ricin (A Subunit), domain 2 › Ricin (A Subunit), domain 2 0.51 31.0 3.24e-01 73.3% 65.4%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4975562 217.1.1.0 ↗ a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain 0.56 42.0 3.06e-01 81.1% 83.0%
3704468 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.55 42.0 3.98e-01 100.0% 67.3%
4139090 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.51 32.0 3.70e-01 91.1% 100.0%
5029405 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.51 31.0 3.69e-01 93.3% 98.2%
5035177 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.50 29.0 3.58e-01 91.1% 96.3%
3304627 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.50 30.0 3.67e-01 91.1% 98.2%
D2 medium residues 68-132_156-166
PDB
Domain cluster: representative