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MK075005.1__AZB66761.1__X__00015

Bact-Vir

MK075005.1__AZB66761.1__X__00015

Identity

Accession:
MK075005 ↗
Kingdom:
phage

Quality

93.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-64
PDB
Domain cluster: representative
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ez2A01 1.10.1660.30 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.69 59.0 5.66e-01 100.0% 82.9%
2oqgB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 46.0 3.85e-01 83.1% 41.7%
5k5iA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.64 31.0 3.31e-01 98.3% 50.0%
3pqkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 48.0 4.11e-01 86.4% 56.6%
6j0eB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 44.0 3.55e-01 76.3% 38.5%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 48.0 3.99e-01 86.4% 56.2%
2mh2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 46.0 4.49e-01 83.1% 76.6%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 46.0 4.04e-01 86.4% 56.4%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 43.0 3.91e-01 83.1% 55.3%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 46.0 3.52e-01 86.4% 37.9%
1ku9B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 42.0 3.82e-01 83.1% 54.0%
2kbiA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.59 48.0 4.47e-01 100.0% 70.9%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 44.0 3.81e-01 93.2% 50.5%
6uvuA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 45.0 3.79e-01 86.4% 51.0%
1xfjA00 3.60.140.10 Alpha Beta › 4-Layer Sandwich › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases 0.58 44.0 2.98e-01 86.4% 41.4%
2rsiA02 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.58 30.0 3.66e-01 100.0% 96.6%
6teyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 45.0 4.25e-01 88.1% 80.8%
1r1tA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 44.0 3.80e-01 86.4% 54.1%
1yuiA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.57 31.0 3.26e-01 100.0% 55.6%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 44.0 3.92e-01 86.4% 69.0%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 45.0 3.99e-01 93.2% 66.3%
3e9lA02 1.20.80.40 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region 0.56 44.0 3.98e-01 96.6% 67.4%
4asnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 45.0 4.01e-01 93.2% 61.1%
3euhC02 1.10.10.2260 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MukE-like family, C-terminal domain 0.56 45.0 3.77e-01 93.2% 71.3%
1p6rA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 46.0 4.18e-01 94.9% 69.5%
1sesA02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.54 44.0 2.79e-01 91.5% 71.1%
2mdgA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.54 30.0 3.08e-01 98.3% 50.9%
2mc3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 42.0 3.65e-01 93.2% 59.2%
1nyrA03 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.53 38.0 2.51e-01 83.1% 94.9%
1stzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 40.0 3.62e-01 86.4% 71.8%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 40.0 3.60e-01 91.5% 71.1%
3e9sA02 1.10.8.1190 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Papain-like viral protease, thumb domain 0.51 40.0 3.35e-01 98.3% 67.7%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 40.0 3.66e-01 93.2% 66.7%
4zohA05 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.50 40.0 3.16e-01 94.9% 62.3%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4094061 101.1.9.98 alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF4004 0.69 60.0 5.36e-01 100.0% 70.6%
5029044 101.1.2.650 alpha arrays › HTH › HTH › winged helix domain › DUF7343 0.67 48.0 4.02e-01 81.4% 45.5%
5050552 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.67 47.0 4.08e-01 81.4% 48.9%
5061101 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.66 46.0 3.88e-01 81.4% 41.9%
5042520 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.65 46.0 4.37e-01 76.3% 62.9%
4981571 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 45.0 3.70e-01 81.4% 38.3%
5054374 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 48.0 4.96e-01 88.1% 87.0%
5082985 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.64 45.0 4.21e-01 81.4% 58.7%
5056381 101.1.2.650 alpha arrays › HTH › HTH › winged helix domain › DUF7343 0.64 45.0 3.87e-01 81.4% 46.3%
5061217 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.64 45.0 4.34e-01 83.1% 64.3%
3413561 101.1.2.248 alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.64 45.0 3.76e-01 76.3% 45.7%
5059900 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.64 45.0 4.77e-01 81.4% 90.0%
5074870 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 47.0 4.01e-01 81.4% 48.0%
4987855 101.1.2.650 alpha arrays › HTH › HTH › winged helix domain › DUF7343 0.63 44.0 3.96e-01 78.0% 51.8%
3282605 101.1.2.508 alpha arrays › HTH › HTH › winged helix domain › PF25872 0.63 50.0 4.60e-01 91.5% 66.3%
4950772 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 49.0 4.12e-01 86.4% 55.0%
4999099 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 49.0 4.14e-01 88.1% 52.4%
5010522 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 44.0 3.88e-01 81.4% 50.6%
5040058 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.62 44.0 3.79e-01 76.3% 48.4%
5033846 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.61 47.0 3.82e-01 86.4% 43.5%
5057549 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 43.0 3.52e-01 79.7% 38.1%
5003771 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.61 45.0 4.13e-01 88.1% 60.0%
3278292 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.60 44.0 3.81e-01 81.4% 49.5%
3282143 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.60 47.0 4.03e-01 86.4% 55.8%
4929751 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 49.0 4.40e-01 93.2% 64.7%
5035351 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.59 46.0 3.99e-01 86.4% 55.8%
4951153 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.59 44.0 3.78e-01 81.4% 49.0%
4988069 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.59 46.0 3.98e-01 86.4% 55.8%
4994237 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.59 49.0 4.23e-01 93.2% 60.0%
4941358 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 46.0 4.21e-01 86.4% 66.3%
5068269 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.59 45.0 4.19e-01 83.1% 66.7%
3284858 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.59 45.0 3.78e-01 86.4% 48.2%
4976901 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 46.0 4.03e-01 86.4% 57.8%
5040253 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.59 45.0 4.02e-01 86.4% 58.9%
4296076 288.1.1.1 a+b four layers › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases › Cu-oxidase_4 0.59 48.0 3.17e-01 91.5% 41.6%
4989284 101.1.2.63 alpha arrays › HTH › HTH › winged helix domain › FaeA 0.59 40.0 4.41e-01 74.6% 97.7%
4927119 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 42.0 4.18e-01 83.1% 72.3%
5040871 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 48.0 4.41e-01 93.2% 71.2%
5078487 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 43.0 3.99e-01 88.1% 60.0%
5015566 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.58 45.0 4.04e-01 86.4% 62.4%
3283252 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.58 44.0 3.69e-01 86.4% 48.2%
3963899 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.57 44.0 3.98e-01 86.4% 62.4%
4948857 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.57 45.0 3.78e-01 88.1% 49.5%
4984339 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.57 47.0 4.37e-01 93.2% 73.3%
5040897 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.57 45.0 4.22e-01 93.2% 70.7%
4970461 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.57 45.0 4.18e-01 88.1% 72.0%
3952925 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.57 47.0 4.13e-01 93.2% 63.3%
4939406 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 44.0 3.21e-01 86.4% 32.6%
3958017 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 47.0 4.03e-01 93.2% 60.0%
5004095 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.56 44.0 4.07e-01 100.0% 64.7%
4956921 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.56 46.0 4.14e-01 93.2% 67.1%
5041451 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.56 45.0 3.87e-01 91.5% 64.0%
3850850 101.1.2.197 alpha arrays › HTH › HTH › winged helix domain › APAF-1-like_WHD 0.56 41.0 3.72e-01 81.4% 67.1%
5058358 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.56 44.0 4.04e-01 93.2% 67.1%
4968989 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 40.0 3.68e-01 81.4% 60.0%
4468068 101.1.2.46 alpha arrays › HTH › HTH › winged helix domain › HrcA_DNA-bdg 0.55 42.0 3.61e-01 86.4% 58.0%
5037176 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.55 44.0 3.93e-01 93.2% 61.1%
5056233 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 44.0 3.92e-01 93.2% 63.3%
4095530 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.54 46.0 4.05e-01 100.0% 91.6%
4142054 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.54 42.0 3.39e-01 88.1% 41.6%
4968330 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 44.0 3.61e-01 93.2% 78.3%
5061382 304.128.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB 0.54 46.0 4.41e-01 100.0% 94.3%
3587362 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.54 43.0 3.35e-01 91.5% 42.4%
4939016 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.54 43.0 3.58e-01 93.2% 48.7%
4420420 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 42.0 3.76e-01 91.5% 61.1%
4985657 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 46.0 3.87e-01 100.0% 70.5%
4973726 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 42.0 3.43e-01 91.5% 61.7%
3739278 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.51 36.0 3.65e-01 74.6% 76.7%
5082276 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 41.0 3.65e-01 93.2% 61.1%
4994670 3636.1.1.0 a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain 0.51 33.0 2.43e-01 81.4% 22.3%
5012277 101.1.2.904 alpha arrays › HTH › HTH › winged helix domain › HTH_38 0.51 39.0 3.74e-01 93.2% 74.7%
5040756 3843.1.1.0 alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K 0.50 39.0 3.42e-01 88.1% 68.4%