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MK075005.1__AZB66809.1__X__00063

Bact-Vir

MK075005.1__AZB66809.1__X__00063

Identity

Accession:
MK075005 ↗
Kingdom:
phage

Quality

95.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Triavirus› Staphylococcus_phage_phiSP119-2

TaxID: 2491317

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-190
PDB
Domain cluster: rep: NC_041875.1__YP_009594310.1__FDG92_gp21__00021__D5-180
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01510.31 best Amidase_2 64.0 2.50e-17 72.7% 97.7%
D2 high residues 215-314
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF25606.2 best SH3b_P2 120.9 3.30e-35 100.0% 95.7%
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2v1rA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 43.0 5.07e-01 96.0% 95.5%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 41.0 4.60e-01 98.0% 81.6%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 39.0 4.41e-01 95.0% 80.0%
1i1jB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 47.0 4.72e-01 100.0% 76.0%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 36.0 4.20e-01 96.0% 91.9%
3agjF01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.57 44.0 4.06e-01 100.0% 64.6%
3g1jA00 2.30.30.350 Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. 0.56 43.0 4.52e-01 99.0% 92.2%
4qmaA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 36.0 3.27e-01 100.0% 49.0%
3rqbA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.51 36.0 2.73e-01 74.0% 90.5%
3volA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 36.0 3.25e-01 73.0% 82.6%
2cy5A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 42.0 3.88e-01 92.0% 89.9%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3259841 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 49.0 5.68e-01 97.0% 95.7%
3700744 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 67.0 6.71e-01 97.0% 99.0%
3546727 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.67 51.0 5.04e-01 100.0% 75.0%
3868602 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.65 49.0 4.92e-01 100.0% 79.0%
3213653 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.63 46.0 5.11e-01 96.0% 96.2%
4452123 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 54.0 5.46e-01 97.0% 96.0%
5036729 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.59 44.0 4.16e-01 100.0% 65.8%
2552660 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.58 44.0 4.11e-01 100.0% 64.6%
4650682 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.57 44.0 4.08e-01 100.0% 63.8%
1157717 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.56 45.0 4.10e-01 100.0% 66.2%
4536848 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.56 45.0 4.12e-01 100.0% 66.9%
4983074 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.56 45.0 4.13e-01 100.0% 66.9%
3226744 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 45.0 4.74e-01 99.0% 97.8%
5058724 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.55 43.0 4.03e-01 100.0% 67.2%
3995874 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 47.0 4.14e-01 97.0% 88.7%
3523477 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.54 38.0 3.15e-01 96.0% 40.0%
3215886 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 43.0 3.83e-01 90.0% 85.3%
3998028 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 43.0 3.79e-01 90.0% 81.9%
3612063 219.1.1.4 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 0.52 44.0 3.11e-01 100.0% 29.4%
3612977 219.1.1.4 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 0.50 45.0 3.07e-01 100.0% 31.7%