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MK088078.1__AYP29023.1__AS1_43__00043
Bact-VirMK088078.1__AYP29023.1__AS1_43__00043
Identity
- Accession:
- MK088078 ↗
- Kingdom:
- phage
Quality
78.9
mean pLDDT
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-60
Domain cluster:
rep: OM049504.1__UIS65445.1__X__00017__D6-77
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bd1A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.86 | 77.0 | 7.45e-01 | 98.3% | 87.7% |
| 2ef8A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.77 | 68.0 | 6.00e-01 | 100.0% | 83.3% |
| 1rzsA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.75 | 64.0 | 6.31e-01 | 98.3% | 91.8% |
| 4ybaA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.74 | 63.0 | 5.82e-01 | 100.0% | 85.7% |
| 2r1jL00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.72 | 62.0 | 6.04e-01 | 100.0% | 87.9% |
| 2hinA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.72 | 60.0 | 5.83e-01 | 96.6% | 87.9% |
| 1x57A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.71 | 61.0 | 5.35e-01 | 100.0% | 67.0% |
| 3kxaA02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.70 | 60.0 | 5.81e-01 | 98.3% | 86.4% |
| 2ictA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.67 | 56.0 | 5.13e-01 | 100.0% | 75.3% |
| 3fyaB00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.66 | 55.0 | 5.14e-01 | 98.3% | 80.5% |
| 2ebyA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.66 | 56.0 | 5.16e-01 | 100.0% | 79.7% |
| 4pu7A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.65 | 54.0 | 5.13e-01 | 98.3% | 77.5% |
| 1xn8A00 | 1.10.3230.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein yqbg › YqbG-like | 0.59 | 46.0 | 3.64e-01 | 87.9% | 53.4% |
| 2guzB00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.55 | 44.0 | 4.30e-01 | 100.0% | 81.5% |
| 1u9lB00 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.52 | 37.0 | 3.56e-01 | 100.0% | 65.7% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.52 | 36.0 | 3.58e-01 | 72.4% | 88.5% |
| 3cj1A02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.50 | 39.0 | 2.64e-01 | 91.4% | 57.8% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4004322 | 101.1.4.24 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › YdaS_toxin | 0.85 | 79.0 | 7.15e-01 | 100.0% | 80.0% |
| 3164312 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.78 | 68.0 | 6.10e-01 | 100.0% | 71.2% |
| 2770 | 101.1.4.21 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › P22_Cro | 0.75 | 64.0 | 6.31e-01 | 98.3% | 91.8% |
| 4008375 | 101.1.4.21 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › P22_Cro | 0.75 | 65.0 | 6.18e-01 | 98.3% | 82.9% |
| 5015485 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.73 | 57.0 | 5.56e-01 | 86.2% | 83.1% |
| 4935348 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.73 | 56.0 | 5.11e-01 | 86.2% | 72.5% |
| 5078550 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.70 | 58.0 | 5.07e-01 | 96.6% | 61.1% |
| 5013940 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.69 | 53.0 | 5.54e-01 | 86.2% | 100.0% |
| 4306906 | 6056.1.1.2 ↗ | alpha arrays › SP1917-like › SP1917-like › SP1917-like › PrmC_N | 0.69 | 53.0 | 5.03e-01 | 86.2% | 85.7% |
| 2644341 | 101.1.4.7 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF739 | 0.68 | 58.0 | 5.43e-01 | 100.0% | 91.9% |
| 5028456 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.65 | 54.0 | 4.93e-01 | 94.8% | 70.0% |
| 3284468 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.64 | 44.0 | 3.93e-01 | 74.1% | 76.1% |
| 3912259 | 101.1.1.65 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 | 0.56 | 45.0 | 3.95e-01 | 96.6% | 57.8% |
| 3514314 | 3538.1.1.5 ↗ | extended segments › MerF › MerF › MerF › FHIPEP | 0.54 | 33.0 | 3.32e-01 | 72.4% | 58.3% |
| 3687851 | 7520.1.1.1 ↗ | a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like › CinA | 0.52 | 44.0 | 3.54e-01 | 96.6% | 63.0% |