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MK095605.1__AZS06255.1__MED16_gp15__00015
Bact-VirMK095605.1__AZS06255.1__MED16_gp15__00015
Identity
- Accession:
- MK095605 ↗
- Kingdom:
- phage
Quality
90.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 26-94
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08809.17 best | DUF1799 | 61.2 | 1.30e-16 | 92.8% | 82.5% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lphC00 | 6.10.140.630 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 41.0 | 4.49e-01 | 79.7% | 67.2% |
| 2cqnA00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.68 | 56.0 | 5.48e-01 | 95.7% | 83.1% |
| 4h9nC00 | 1.20.58.2170 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 57.0 | 4.14e-01 | 100.0% | 34.1% |
| 2l2oA00 | 1.10.10.1540 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain | 0.64 | 50.0 | 4.74e-01 | 88.4% | 94.1% |
| 1zoiA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.60 | 47.0 | 3.15e-01 | 85.5% | 30.2% |
| 1w07A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.60 | 42.0 | 3.19e-01 | 73.9% | 60.7% |
| 6s10A01 | 1.10.1710.10 | Mainly Alpha › Orthogonal Bundle › Fertility Inhibition Protein O; Chain: A; Domain 1 › ProQ/FinO domain | 0.60 | 50.0 | 4.44e-01 | 95.7% | 90.2% |
| 1m2oA04 | 1.20.120.730 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Sec23/Sec24 helical domain | 0.59 | 44.0 | 3.61e-01 | 82.6% | 75.9% |
| 2oznB01 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.58 | 41.0 | 3.94e-01 | 73.9% | 81.2% |
| 2yguC00 | 1.10.238.190 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › | 0.58 | 44.0 | 3.80e-01 | 85.5% | 53.4% |
| 2fulB00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.58 | 46.0 | 3.63e-01 | 91.3% | 61.0% |
| 2jokA01 | 1.10.4120.10 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › SopE-like, GEF domain | 0.57 | 45.0 | 3.58e-01 | 97.1% | 80.6% |
| 2xkoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 45.0 | 4.18e-01 | 92.8% | 78.7% |
| 1ls1A01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.56 | 43.0 | 4.03e-01 | 85.5% | 70.8% |
| 2e9xB02 | 1.20.58.1020 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 48.0 | 4.11e-01 | 95.7% | 60.6% |
| 3pm9A03 | 3.30.70.2190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 38.0 | 3.22e-01 | 78.3% | 78.5% |
| 2odvA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 44.0 | 3.79e-01 | 95.7% | 87.5% |
| 2ctdA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.50 | 27.0 | 2.46e-01 | 91.3% | 34.4% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3217750 | 101.21.1.2 ↗ | alpha arrays › HTH › HTH domain in DNA topoisomerase IV alpha subunit › HTH domain in DNA topoisomerase IV alpha subunit › Nucleolin_bd | 0.69 | 61.0 | 6.11e-01 | 100.0% | 98.6% |
| 3277063 | 7000.1.1.2 ↗ | alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › RBD_LARS1 | 0.68 | 55.0 | 5.57e-01 | 94.2% | 91.4% |
| 3308779 | 4982.1.1.3 ↗ | alpha arrays › KaiA/RbsU domain-like › KaiA/RbsU domain › KaiA/RbsU domain › Tic110 | 0.68 | 58.0 | 4.64e-01 | 98.6% | 47.9% |
| 5035948 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 52.0 | 5.04e-01 | 88.4% | 95.0% |
| 3740778 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 53.0 | 5.19e-01 | 91.3% | 97.3% |
| 4975482 | 3290.1.1.0 ↗ | alpha complex topology › Cytosolic helical domain in ferrous iron transport protein B › Cytosolic helical domain in ferrous iron transport protein B › Cytosolic helical domain in ferrous iron transport protein B | 0.64 | 49.0 | 4.43e-01 | 100.0% | 60.0% |
| 143797 | 101.1.2.149 ↗ | alpha arrays › HTH › HTH › winged helix domain › Costars | 0.64 | 50.0 | 4.81e-01 | 88.4% | 98.8% |
| 5054860 | 3755.3.1.305 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Rad50_zn_hook | 0.62 | 42.0 | 3.10e-01 | 78.3% | 25.9% |
| 3189222 | 2003.1.2.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 | 0.62 | 45.0 | 2.77e-01 | 78.3% | 75.2% |
| 4490196 | 108.1.1.207 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › PF30486 | 0.62 | 46.0 | 4.45e-01 | 81.2% | 96.2% |
| 4932665 | 181.1.1.0 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins | 0.62 | 42.0 | 3.88e-01 | 71.0% | 60.0% |
| 4988993 | 5086.1.1.231 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › Rad50_zn_hook | 0.61 | 45.0 | 3.50e-01 | 79.7% | 36.7% |
| 3610908 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.59 | 41.0 | 3.71e-01 | 75.4% | 92.0% |
| None | — | 0.58 | 45.0 | 4.29e-01 | 88.4% | 88.2% | |
| 3930816 | 101.1.2.236 ↗ | alpha arrays › HTH › HTH › winged helix domain › POLR3C_WHD | 0.57 | 49.0 | 3.33e-01 | 100.0% | 66.9% |
| 4029676 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.56 | 40.0 | 4.07e-01 | 76.8% | 84.1% |
| 3655694 | 4992.1.1.0 ↗ | extended segments › RelB-like › RelB-like › RelB-like | 0.56 | 42.0 | 3.89e-01 | 78.3% | 68.2% |
| 3922895 | 4033.1.1.1 ↗ | alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA_dh_N | 0.56 | 47.0 | 4.11e-01 | 97.1% | 61.9% |
| 3713201 | 4323.1.1.1 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.56 | 42.0 | 3.25e-01 | 79.7% | 41.4% |
| 5040756 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.55 | 42.0 | 3.94e-01 | 89.9% | 95.8% |
| 3281932 | 628.1.1.1 ↗ | alpha bundles › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › FCD | 0.55 | 46.0 | 3.73e-01 | 98.6% | 64.8% |
| 3592142 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.55 | 44.0 | 3.29e-01 | 91.3% | 81.9% |
| 3512966 | 604.27.1.0 ↗ | alpha bundles › Spectrin repeat-like › Triple-helical domain in insecticidal protein Cry1Ac › Triple-helical domain in insecticidal protein Cry1Ac | 0.53 | 42.0 | 4.27e-01 | 91.3% | 85.7% |
| 3903618 | 219.1.1.54 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C98 | 0.51 | 42.0 | 2.77e-01 | 91.3% | 36.6% |
| 3166881 | 906.1.1.3 ↗ | few secondary structure elements › CCCH zinc finger › CCCH zinc finger › CCCH zinc finger › LUC7 | 0.50 | 43.0 | 3.32e-01 | 91.3% | 93.6% |