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MK095605.1__AZS06266.1__MED16_gp26__00026
Bact-VirMK095605.1__AZS06266.1__MED16_gp26__00026
Identity
- Accession:
- MK095605 ↗
- Kingdom:
- phage
Quality
76.8
mean pLDDT
Cluster
View cluster (10 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-111
Domain cluster:
representative
Pfam (4)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12844.14 best | HTH_19 | 32.8 | 7.10e-08 | 56.8% | 81.2% |
| PF13560.13 | HTH_31 | 32.6 | 1.10e-07 | 54.0% | 87.5% |
| PF01381.29 | HTH_3 | 45.2 | 1.10e-11 | 49.5% | 92.7% |
| PF13443.13 | HTH_26 | 26.7 | 7.20e-06 | 46.9% | 81.0% |
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1x57A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.81 | 54.0 | 5.97e-01 | 82.0% | 83.5% |
| 4ybaA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.80 | 52.0 | 6.25e-01 | 74.8% | 94.8% |
| 4jcyA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.80 | 57.0 | 6.29e-01 | 74.8% | 88.0% |
| 3fmyA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.79 | 42.0 | 5.37e-01 | 73.9% | 87.9% |
| 1b0nA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.77 | 56.0 | 5.82e-01 | 75.7% | 79.6% |
| 2xcjA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.77 | 55.0 | 6.28e-01 | 82.0% | 96.4% |
| 7vjmB01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.77 | 41.0 | 5.39e-01 | 71.2% | 92.2% |
| 2auwB02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.72 | 43.0 | 5.41e-01 | 73.0% | 95.7% |
| 1ic8A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.71 | 44.0 | 4.74e-01 | 97.3% | 72.3% |
| 2mqkA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.70 | 39.0 | 4.92e-01 | 73.0% | 92.3% |
| 3g7dA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.69 | 50.0 | 5.70e-01 | 83.8% | 96.5% |
| 3mlfE00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.68 | 46.0 | 5.16e-01 | 76.6% | 88.4% |
| 1vpwA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.63 | 29.0 | 3.94e-01 | 70.3% | 84.2% |
| 2fjrA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.63 | 41.0 | 4.69e-01 | 74.8% | 94.7% |
| 3kjxD01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.60 | 30.0 | 3.88e-01 | 71.2% | 85.2% |
| 6uglB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 29.0 | 3.94e-01 | 71.2% | 96.6% |
| 3by4A00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.54 | 38.0 | 3.35e-01 | 73.0% | 70.3% |
| 6jqsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 31.0 | 3.99e-01 | 76.6% | 97.0% |
| 1s4kA00 | 1.10.3100.10 | Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein | 0.53 | 48.0 | 4.71e-01 | 97.3% | 99.2% |
| 2ox6D00 | 1.10.3100.10 | Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein | 0.52 | 48.0 | 4.22e-01 | 99.1% | 98.8% |
| 7ezyA01 | 1.10.3100.10 | Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein | 0.52 | 46.0 | 4.58e-01 | 94.6% | 100.0% |
| 1ti2A03 | 3.40.228.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dimethylsulfoxide Reductase; domain 2 › Dimethylsulfoxide Reductase, domain 2 | 0.52 | 39.0 | 2.96e-01 | 79.3% | 85.6% |
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 30.0 | 3.63e-01 | 77.5% | 88.9% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5003294 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.89 | 53.0 | 6.40e-01 | 70.3% | 88.0% |
| None | — | 0.89 | 48.0 | 6.09e-01 | 74.8% | 85.7% | |
| None | — | 0.89 | 47.0 | 6.63e-01 | 73.9% | 100.0% | |
| 148652 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.89 | 56.0 | 6.33e-01 | 70.3% | 80.9% |
| 3624238 | 101.1.4.43 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3+MBF1 | 0.85 | 52.0 | 5.07e-01 | 73.9% | 57.5% |
| 3965549 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.84 | 56.0 | 6.74e-01 | 91.0% | 100.0% |
| 3978875 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.84 | 58.0 | 5.73e-01 | 74.8% | 67.8% |
| 3591049 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.84 | 55.0 | 4.88e-01 | 73.0% | 49.3% |
| 4008186 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.84 | 56.0 | 5.48e-01 | 75.7% | 63.3% |
| 3504520 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.83 | 56.0 | 5.95e-01 | 91.0% | 77.0% |
| 3985012 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.82 | 51.0 | 6.10e-01 | 72.1% | 92.0% |
| 3965656 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.81 | 54.0 | 6.37e-01 | 75.7% | 93.8% |
| 4954379 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.80 | 55.0 | 5.53e-01 | 95.5% | 70.0% |
| 4536849 | 10.12.1.146 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › HTH_3 | 0.77 | 56.0 | 3.67e-01 | 74.8% | 46.3% |
| 4950653 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.73 | 56.0 | 5.14e-01 | 89.2% | 62.9% |
| 3283172 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.72 | 53.0 | 3.98e-01 | 76.6% | 35.3% |
| 4509221 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.71 | 57.0 | 5.50e-01 | 87.4% | 75.2% |
| 3963744 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.69 | 45.0 | 5.17e-01 | 76.6% | 92.5% |
| 3968645 | 101.1.4.18 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 | 0.67 | 57.0 | 5.53e-01 | 93.7% | 83.3% |
| 3989087 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.64 | 56.0 | 5.64e-01 | 91.0% | 93.6% |