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MK095606.1__AZS06387.1__AAS23_gp74__00074
Bact-VirMK095606.1__AZS06387.1__AAS23_gp74__00074
Identity
- Accession:
- MK095606 ↗
- Kingdom:
- phage
Quality
88.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Drexlerviridae›
Sauletekiovirus›
Pantoea_phage_vB_PagS_AAS23
TaxID: 2499073
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-93
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.82 | 57.0 | 6.34e-01 | 96.7% | 89.0% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 53.0 | 5.10e-01 | 72.5% | 78.4% |
| 1vctA01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.75 | 51.0 | 4.81e-01 | 70.3% | 62.4% |
| 2e9xA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 55.0 | 4.83e-01 | 79.1% | 82.8% |
| 1urfA00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.72 | 50.0 | 5.26e-01 | 72.5% | 100.0% |
| 6xxvC00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.67 | 47.0 | 4.36e-01 | 71.4% | 87.4% |
| 3sjqC00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.66 | 45.0 | 4.73e-01 | 70.3% | 82.5% |
| 4nqiD00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.65 | 46.0 | 3.40e-01 | 72.5% | 31.5% |
| 3teqB00 | 1.10.287.3550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.64 | 44.0 | 4.28e-01 | 70.3% | 74.3% |
| 1vw4T01 | 6.10.330.20 | Special › Helix non-globular › Monooxygenase › | 0.61 | 45.0 | 4.25e-01 | 79.1% | 64.3% |
| 7d3uC01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 42.0 | 3.96e-01 | 87.9% | 62.6% |
| 2yf4F00 | 1.10.3420.10 | Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain | 0.58 | 40.0 | 3.53e-01 | 72.5% | 78.3% |
| 3hgtA00 | 3.40.50.12360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 49.0 | 3.48e-01 | 95.6% | 63.6% |
| 2kg7B00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.57 | 47.0 | 4.67e-01 | 97.8% | 86.6% |
| 2a3qA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.56 | 41.0 | 3.83e-01 | 95.6% | 61.9% |
| 3tulB00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.53 | 46.0 | 4.14e-01 | 100.0% | 78.2% |
| 3axjB01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.52 | 46.0 | 3.89e-01 | 100.0% | 80.6% |
| 4iw9A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 47.0 | 4.33e-01 | 100.0% | 84.1% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3298167 | 5086.1.1.62 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › XH | 0.83 | 58.0 | 4.86e-01 | 71.4% | 50.0% |
| 3737161 | 3559.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Med22 | 0.82 | 58.0 | 5.40e-01 | 72.5% | 66.4% |
| 5073974 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.82 | 57.0 | 6.26e-01 | 71.4% | 92.0% |
| 4016292 | 192.2.1.18 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ING | 0.80 | 55.0 | 4.72e-01 | 70.3% | 67.4% |
| 3437287 | 5086.1.1.199 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › PF31016 | 0.78 | 54.0 | 4.30e-01 | 71.4% | 63.4% |
| 3705545 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.78 | 55.0 | 4.35e-01 | 72.5% | 41.1% |
| 3651776 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.76 | 53.0 | 4.16e-01 | 72.5% | 48.4% |
| 3960011 | 150.8.1.2 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE › EspB_PPE | 0.74 | 50.0 | 4.15e-01 | 70.3% | 57.5% |
| 4459223 | 605.1.1.162 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › COX4_pro | 0.73 | 50.0 | 5.04e-01 | 94.5% | 69.9% |
| 3600095 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.70 | 49.0 | 3.29e-01 | 100.0% | 19.4% |
| 4116939 | 2004.1.1.525 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23, AAA_27, SbcC_Walker_B | 0.69 | 48.0 | 3.03e-01 | 72.5% | 17.5% |
| 4885814 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.68 | 47.0 | 4.77e-01 | 71.4% | 75.6% |
| 3882066 | 3291.1.1.124 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Bap31 | 0.68 | 52.0 | 4.29e-01 | 81.3% | 51.5% |
| 4522608 | 3812.1.1.15 ↗ | alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE › COX4_pro | 0.68 | 49.0 | 4.97e-01 | 98.9% | 75.6% |
| 3618651 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.68 | 47.0 | 4.89e-01 | 72.5% | 80.0% |
| 3707409 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.67 | 47.0 | 4.37e-01 | 72.5% | 60.9% |
| 3358852 | 3755.4.1.62 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › PF31016 | 0.64 | 59.0 | 4.85e-01 | 100.0% | 99.4% |
| 3312027 | 603.1.1.156 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PGG | 0.63 | 60.0 | 5.14e-01 | 97.8% | 90.8% |
| 3619500 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.63 | 44.0 | 3.04e-01 | 72.5% | 24.8% |
| 4241570 | 192.15.1.91 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › COX4_pro | 0.62 | 47.0 | 4.92e-01 | 100.0% | 85.9% |
| 3302599 | 5086.1.1.128 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF599 | 0.62 | 56.0 | 5.01e-01 | 100.0% | 72.8% |
| 3793286 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.57 | 47.0 | 3.74e-01 | 94.5% | 75.0% |
| 3500901 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.55 | 46.0 | 3.77e-01 | 96.7% | 77.4% |
| 3204414 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.55 | 46.0 | 3.10e-01 | 93.4% | 27.6% |
| 4965663 | 5039.1.1.1 ↗ | alpha bundles › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › COX3 | 0.55 | 48.0 | 3.56e-01 | 100.0% | 81.8% |
| 3969996 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.55 | 48.0 | 3.79e-01 | 96.7% | 51.1% |
| 3941043 | 605.1.1.211 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › ATG9 | 0.53 | 45.0 | 2.94e-01 | 100.0% | 21.4% |