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MK095606.1__AZS06391.1__AAS23_gp78__00078
Bact-VirMK095606.1__AZS06391.1__AAS23_gp78__00078
Identity
- Accession:
- MK095606 ↗
- Kingdom:
- phage
Quality
77.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Drexlerviridae›
Sauletekiovirus›
Pantoea_phage_vB_PagS_AAS23
TaxID: 2499073
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-58
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1whvA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.69 | 52.0 | 4.26e-01 | 87.8% | 68.0% |
| 2jveA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.67 | 54.0 | 4.90e-01 | 98.0% | 64.8% |
| 2wadA02 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.66 | 55.0 | 4.01e-01 | 98.0% | 42.6% |
| 3r4cA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.65 | 39.0 | 3.14e-01 | 91.8% | 28.7% |
| 2pwyA01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.65 | 48.0 | 4.63e-01 | 81.6% | 100.0% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.65 | 50.0 | 3.49e-01 | 85.7% | 47.9% |
| 1o54A01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.64 | 48.0 | 4.27e-01 | 83.7% | 80.6% |
| 2npnA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.63 | 48.0 | 3.81e-01 | 85.7% | 42.2% |
| 4gi3C00 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.62 | 45.0 | 4.36e-01 | 100.0% | 70.2% |
| 4lvnP00 | 3.30.70.2380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 48.0 | 4.23e-01 | 93.9% | 97.5% |
| 1u3eM02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 50.0 | 4.49e-01 | 91.8% | 79.4% |
| 5ccbA01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.61 | 46.0 | 4.14e-01 | 85.7% | 81.9% |
| 2hjqA01 | 3.40.5.20 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › YqbF domain | 0.60 | 44.0 | 4.49e-01 | 81.6% | 100.0% |
| 1pqsA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 41.0 | 3.65e-01 | 91.8% | 50.6% |
| 4iajA00 | 3.30.1490.390 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 | 0.57 | 44.0 | 3.95e-01 | 89.8% | 69.7% |
| 2fb7A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 42.0 | 3.72e-01 | 83.7% | 87.5% |
| 3buxB03 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.56 | 39.0 | 3.39e-01 | 77.6% | 52.3% |
| 3nuhB02 | 3.30.300.370 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.56 | 46.0 | 3.60e-01 | 100.0% | 100.0% |
| 2xqyA03 | 2.60.40.3190 | Mainly Beta › Sandwich › Immunoglobulin-like › Herpesvirus glycoprotein H, C-terminal domain | 0.55 | 42.0 | 3.24e-01 | 89.8% | 39.1% |
| 7c2fB01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.55 | 44.0 | 3.78e-01 | 93.9% | 74.4% |
| 4r3dA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 43.0 | 3.22e-01 | 89.8% | 97.1% |
| 4p78A00 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 45.0 | 3.91e-01 | 100.0% | 77.9% |
| 2xguB00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.55 | 39.0 | 2.92e-01 | 77.6% | 75.4% |
| 4m0wA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 44.0 | 3.33e-01 | 95.9% | 97.8% |
| 5eh1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 41.0 | 3.36e-01 | 83.7% | 55.8% |
| 3glkA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.54 | 41.0 | 3.98e-01 | 98.0% | 72.9% |
| 2mctA00 | 2.60.40.4250 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 40.0 | 3.21e-01 | 81.6% | 53.9% |
| 4fixA01 | 3.90.550.60 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › | 0.54 | 42.0 | 2.55e-01 | 89.8% | 59.3% |
| 2o3iA01 | 3.40.1610.10 | Alpha Beta › 3-Layer(aba) Sandwich › CV3147-like fold › CV3147-like domain | 0.54 | 43.0 | 2.85e-01 | 93.9% | 69.9% |
| 2cs4A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 41.0 | 3.50e-01 | 93.9% | 61.1% |
| 4uhwA09 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.53 | 37.0 | 2.99e-01 | 71.4% | 79.2% |
| 1l0qA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 36.0 | 2.95e-01 | 81.6% | 38.9% |
| 2bkfA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 39.0 | 3.42e-01 | 91.8% | 50.6% |
| 3l5iA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 41.0 | 3.48e-01 | 89.8% | 55.7% |
| 1m2oA05 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.52 | 42.0 | 3.32e-01 | 89.8% | 71.4% |
| 2yn5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 41.0 | 3.57e-01 | 89.8% | 58.2% |
| 2f4pA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 42.0 | 3.20e-01 | 98.0% | 53.0% |
| 3fl7A05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.32e-01 | 85.7% | 50.0% |
| 2uwqA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 38.0 | 3.36e-01 | 89.8% | 86.0% |
| 1wgoA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.02e-01 | 81.6% | 42.4% |
| 1ca1A02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.51 | 38.0 | 3.02e-01 | 89.8% | 75.8% |
| 6a6yA00 | 2.60.40.1490 | Mainly Beta › Sandwich › Immunoglobulin-like › Histone chaperone ASF1-like | 0.50 | 40.0 | 2.90e-01 | 89.8% | 43.4% |
| 4nlcA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.50 | 36.0 | 2.36e-01 | 81.6% | 59.5% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3281602 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.76 | 61.0 | 6.15e-01 | 91.8% | 89.6% |
| 4340143 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.76 | 62.0 | 5.51e-01 | 91.8% | 63.8% |
| 3897315 | 382.1.1.2 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_TOLIP | 0.73 | 58.0 | 5.01e-01 | 89.8% | 61.3% |
| 3705856 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.70 | 59.0 | 3.66e-01 | 98.0% | 48.0% |
| 3805835 | 4121.1.1.2 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › MRS2-like | 0.69 | 57.0 | 3.60e-01 | 95.9% | 30.6% |
| 3296049 | 4121.1.1.2 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › MRS2-like | 0.68 | 56.0 | 3.67e-01 | 95.9% | 37.1% |
| 3962617 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.67 | 55.0 | 3.66e-01 | 93.9% | 32.2% |
| 3637401 | 4081.1.1.8 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT_2 | 0.65 | 53.0 | 3.50e-01 | 93.9% | 31.4% |
| 3205036 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.65 | 53.0 | 3.42e-01 | 93.9% | 28.2% |
| 3875549 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.65 | 53.0 | 3.59e-01 | 93.9% | 34.4% |
| 3171365 | 822.1.1.1 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF | 0.65 | 50.0 | 3.65e-01 | 93.9% | 29.0% |
| 3495764 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.64 | 52.0 | 3.59e-01 | 93.9% | 37.3% |
| 3258276 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.64 | 52.0 | 3.45e-01 | 93.9% | 31.1% |
| 4943773 | 297.1.1.2 ↗ | a+b complex topology › YrdC/RibB › YrdC/RibB › YrdC/RibB › Sua5_yciO_yrdC | 0.64 | 49.0 | 3.26e-01 | 85.7% | 82.8% |
| 3595471 | 317.1.1.0 ↗ | a+b two layers › Translation initiation factor eIF4e and phosphothreonine lyase › Translation initiation factor eIF4e and phosphothreonine lyase › Translation initiation factor eIF4e and phosphothreonine lyase | 0.64 | 53.0 | 3.61e-01 | 100.0% | 51.5% |
| 3252861 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.63 | 54.0 | 3.58e-01 | 100.0% | 72.1% |
| 4489784 | 241.12.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › YktB/PF0168-like › YktB/PF0168-like › DUF1054 | 0.63 | 46.0 | 3.18e-01 | 100.0% | 21.0% |
| 3176986 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.62 | 51.0 | 4.43e-01 | 100.0% | 76.5% |
| 3543655 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.62 | 50.0 | 3.34e-01 | 93.9% | 30.9% |
| 3963812 | 3170.1.1.0 ↗ | a+b two layers › uncharacterized protein YP_926445.1 › uncharacterized protein YP_926445.1 › uncharacterized protein YP_926445.1 | 0.62 | 53.0 | 4.15e-01 | 100.0% | 98.2% |
| 5001166 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.60 | 51.0 | 3.67e-01 | 93.9% | 39.3% |
| 5009 | 4076.3.1.2 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › YqbF | 0.60 | 44.0 | 4.47e-01 | 83.7% | 98.0% |
| 3879988 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.60 | 48.0 | 3.24e-01 | 93.9% | 31.6% |
| 3929134 | 221.1.1.113 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_3 | 0.59 | 48.0 | 3.76e-01 | 95.9% | 50.8% |
| 3217685 | 822.1.1.0 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain | 0.59 | 45.0 | 4.34e-01 | 89.8% | 75.9% |
| 4158495 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.58 | 50.0 | 4.20e-01 | 100.0% | 94.4% |
| 3465504 | 4076.1.1.0 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like | 0.58 | 47.0 | 4.77e-01 | 100.0% | 94.0% |
| 3969006 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.58 | 42.0 | 4.39e-01 | 81.6% | 88.9% |
| 4004704 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.58 | 42.0 | 4.36e-01 | 81.6% | 88.9% |
| 4304758 | 2010.1.1.1 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › DegV | 0.58 | 46.0 | 3.37e-01 | 93.9% | 76.1% |
| 3959955 | 304.163.1.3 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › PF31118 | 0.58 | 42.0 | 4.34e-01 | 81.6% | 91.1% |
| 3404558 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.58 | 45.0 | 4.50e-01 | 100.0% | 82.0% |
| 3721040 | 4176.1.1.2 ↗ | a/b three-layered sandwiches › a/b domain in CV3147-like proteins › a/b domain in CV3147-like proteins › a/b domain in CV3147-like proteins › S-Me-THD_N | 0.57 | 44.0 | 2.89e-01 | 87.8% | 20.0% |
| 3467232 | 4076.1.1.0 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like | 0.57 | 45.0 | 4.16e-01 | 98.0% | 65.7% |
| 4998768 | 299.1.1.1 ↗ | a+b complex topology › YbaK/ProRS associated domain › YbaK/ProRS associated domain › YbaK/ProRS associated domain › tRNA_edit | 0.57 | 45.0 | 3.43e-01 | 100.0% | 34.5% |
| 3546356 | 221.1.1.113 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_3 | 0.56 | 46.0 | 3.54e-01 | 100.0% | 47.7% |
| 4978421 | 1.1.2.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › MacB_PCD | 0.56 | 42.0 | 3.25e-01 | 83.7% | 65.8% |
| 3562629 | 221.1.1.113 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_3 | 0.56 | 43.0 | 3.42e-01 | 91.8% | 76.7% |
| 5052692 | 3740.1.1.4 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C | 0.56 | 45.0 | 2.79e-01 | 100.0% | 71.1% |
| 4119657 | 3740.1.1.1 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_N,FrhB_FdhB_C | 0.56 | 45.0 | 2.93e-01 | 100.0% | 92.6% |
| 4989099 | 3740.1.1.4 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C | 0.56 | 45.0 | 2.88e-01 | 100.0% | 82.7% |
| 5066398 | 3740.1.1.4 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C | 0.55 | 43.0 | 2.78e-01 | 100.0% | 78.1% |
| 3244906 | 221.1.1.113 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_3 | 0.55 | 44.0 | 3.46e-01 | 91.8% | 83.6% |
| 4956917 | 11.1.1.15 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD | 0.54 | 42.0 | 3.31e-01 | 85.7% | 56.2% |
| 4018289 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 45.0 | 3.28e-01 | 95.9% | 91.7% |
| 5062713 | 3703.1.1.0 ↗ | a/b three-layered sandwiches › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain | 0.53 | 40.0 | 3.42e-01 | 89.8% | 51.6% |
| 3395675 | 223.2.1.20 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_1 | 0.53 | 40.0 | 2.77e-01 | 79.6% | 74.8% |
| 4998684 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 42.0 | 3.59e-01 | 100.0% | 91.6% |
| 3440477 | 2484.1.1.15 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › GDA1_CD39 | 0.52 | 39.0 | 3.18e-01 | 81.6% | 62.1% |
| 5053654 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 41.0 | 3.21e-01 | 98.0% | 90.8% |
| 3581044 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.51 | 37.0 | 3.34e-01 | 89.8% | 65.9% |
| 4417022 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.51 | 38.0 | 2.81e-01 | 87.8% | 38.7% |