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MK097141.1__AZF88632.1__X__00068
Bact-VirMK097141.1__AZF88632.1__X__00068
Identity
- Accession:
- MK097141 ↗
- Kingdom:
- phage
Quality
82.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-59
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1hlvA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.72 | 62.0 | 6.02e-01 | 96.3% | 100.0% |
| 3c1dA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 55.0 | 5.83e-01 | 88.9% | 100.0% |
| 3e3vA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 60.0 | 5.99e-01 | 98.1% | 94.6% |
| 2yqzA02 | 1.10.8.900 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.71 | 49.0 | 4.62e-01 | 74.1% | 100.0% |
| 3bniB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.71 | 60.0 | 4.25e-01 | 96.3% | 36.3% |
| 3fbzA01 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 59.0 | 4.92e-01 | 100.0% | 60.8% |
| 3dplC03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 59.0 | 5.27e-01 | 100.0% | 69.9% |
| 1s7zA01 | 1.20.120.780 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DNA mimic ocr | 0.70 | 59.0 | 4.92e-01 | 100.0% | 95.0% |
| 2khmA01 | 1.10.10.1350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain | 0.69 | 61.0 | 4.88e-01 | 100.0% | 58.3% |
| 3tl4X02 | 1.10.10.2420 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.69 | 57.0 | 5.36e-01 | 100.0% | 80.6% |
| 6fhpD00 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.69 | 51.0 | 4.94e-01 | 81.5% | 80.6% |
| 1bqbA02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.68 | 51.0 | 3.73e-01 | 81.5% | 33.3% |
| 2k85A00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.68 | 56.0 | 5.40e-01 | 100.0% | 84.6% |
| 3d5lA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 53.0 | 5.42e-01 | 90.7% | 94.2% |
| 2pbiA02 | 1.10.1240.60 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.64 | 55.0 | 4.40e-01 | 100.0% | 49.5% |
| 1fnnB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 51.0 | 4.29e-01 | 94.4% | 60.2% |
| 6b8hO01 | 1.10.520.20 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.61 | 49.0 | 4.26e-01 | 100.0% | 62.6% |
| 4m70B00 | 1.10.246.200 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain | 0.61 | 41.0 | 3.57e-01 | 70.4% | 41.8% |
| 4jndA01 | 1.10.1740.220 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.61 | 43.0 | 3.37e-01 | 77.8% | 39.2% |
| 2n00A00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.61 | 42.0 | 3.58e-01 | 81.5% | 42.1% |
| 6e6oA00 | 1.20.50.10 | Mainly Alpha › Up-down Bundle › Pheromone ER-1 › Pheromone ER-1 | 0.60 | 39.0 | 4.29e-01 | 100.0% | 90.0% |
| 2oxlA00 | 1.20.5.5260 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.59 | 45.0 | 4.44e-01 | 88.9% | 90.3% |
| 1eyqA02 | 3.50.70.10 | Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › | 0.59 | 44.0 | 3.22e-01 | 83.3% | 40.3% |
| 1icrA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.58 | 44.0 | 3.04e-01 | 85.2% | 40.3% |
| 3dptB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 47.0 | 4.44e-01 | 98.1% | 100.0% |
| 6mh4A03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.57 | 38.0 | 3.42e-01 | 70.4% | 49.4% |
| 3m6zA03 | 1.10.150.740 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.57 | 42.0 | 3.94e-01 | 87.0% | 62.9% |
| 1l8dA00 | 1.10.287.510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.56 | 39.0 | 3.17e-01 | 81.5% | 38.8% |
| 1u8bA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.56 | 45.0 | 4.45e-01 | 100.0% | 86.9% |
| 2ggfA00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.55 | 47.0 | 3.56e-01 | 100.0% | 39.4% |
| 3k6hA01 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.55 | 40.0 | 2.94e-01 | 81.5% | 91.6% |
| 3q9oA02 | 3.90.1350.10 | Alpha Beta › Alpha-Beta Complex › Exotoxin A, middle domain › Exotoxin A, middle domain | 0.54 | 39.0 | 2.87e-01 | 79.6% | 73.7% |
| 4rgxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 46.0 | 3.52e-01 | 100.0% | 44.0% |
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 40.0 | 3.55e-01 | 83.3% | 97.6% |
| 6tqoA03 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.52 | 37.0 | 3.62e-01 | 100.0% | 68.3% |
| 5jj6B01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 36.0 | 3.17e-01 | 81.5% | 43.8% |
| 1b5lA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.50 | 39.0 | 3.05e-01 | 98.1% | 74.3% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3785070 | 101.1.2.127 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 | 0.74 | 64.0 | 5.21e-01 | 100.0% | 66.3% |
| 3576823 | 101.1.2.127 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 | 0.73 | 64.0 | 4.84e-01 | 100.0% | 53.5% |
| 3580853 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 61.0 | 5.80e-01 | 96.3% | 87.7% |
| 3726085 | 101.1.2.127 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 | 0.73 | 62.0 | 5.45e-01 | 100.0% | 67.1% |
| 3927474 | 101.1.2.127 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 | 0.72 | 63.0 | 5.37e-01 | 100.0% | 77.5% |
| 3713829 | 101.1.2.127 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 | 0.72 | 62.0 | 5.08e-01 | 100.0% | 68.0% |
| 3935995 | 101.1.2.127 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 | 0.71 | 60.0 | 5.51e-01 | 100.0% | 77.3% |
| 3612970 | 101.1.2.127 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 | 0.71 | 60.0 | 5.05e-01 | 100.0% | 70.4% |
| 3355337 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.70 | 48.0 | 4.45e-01 | 72.2% | 55.7% |
| 3505632 | 101.1.2.127 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 | 0.70 | 60.0 | 5.30e-01 | 98.1% | 68.8% |
| 3598367 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 59.0 | 5.08e-01 | 100.0% | 75.3% |
| 3705220 | 101.1.2.127 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 | 0.70 | 60.0 | 5.24e-01 | 100.0% | 81.2% |
| 3598997 | 101.1.2.127 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 | 0.70 | 59.0 | 5.19e-01 | 100.0% | 82.4% |
| 3488655 | 7563.1.1.6 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › LSDAT_euk | 0.68 | 58.0 | 3.61e-01 | 100.0% | 27.9% |
| None | — | 0.67 | 58.0 | 3.62e-01 | 100.0% | 28.1% | |
| 3686422 | 621.1.1.0 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0.67 | 56.0 | 4.65e-01 | 100.0% | 61.9% |
| 2430288 | 3651.1.1.1 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B | 0.65 | 55.0 | 4.14e-01 | 100.0% | 51.7% |
| 5075120 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.65 | 46.0 | 3.19e-01 | 75.9% | 25.0% |
| 5072101 | 3651.1.1.1 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B | 0.64 | 53.0 | 4.32e-01 | 100.0% | 67.0% |
| 5049515 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.63 | 52.0 | 4.27e-01 | 100.0% | 69.6% |
| 4974088 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.63 | 45.0 | 2.93e-01 | 77.8% | 17.7% |
| 3607327 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.62 | 51.0 | 5.01e-01 | 98.1% | 95.0% |
| 3807190 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 51.0 | 4.09e-01 | 100.0% | 53.3% |
| 3660913 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.61 | 45.0 | 3.92e-01 | 83.3% | 88.9% |
| 3480129 | 6092.1.1.1 ↗ | alpha bundles › Helical extension domain in Regulator of G-protein signaling 9 › Helical extension domain in Regulator of G-protein signaling 9 › Helical extension domain in Regulator of G-protein signaling 9 › RGS_DHEX | 0.61 | 53.0 | 4.32e-01 | 100.0% | 53.7% |
| 3430243 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.59 | 40.0 | 3.65e-01 | 72.2% | 62.5% |
| 5018515 | 5050.1.1.53 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MarC | 0.58 | 47.0 | 3.34e-01 | 100.0% | 81.0% |
| 3998284 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.56 | 39.0 | 2.76e-01 | 74.1% | 26.9% |
| 4034213 | 632.2.1.5 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › DUF1542 | 0.56 | 39.0 | 3.43e-01 | 74.1% | 52.5% |
| 3720226 | 3860.1.1.0 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm | 0.55 | 39.0 | 2.94e-01 | 74.1% | 37.0% |
| 5010578 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.55 | 41.0 | 3.57e-01 | 85.2% | 57.8% |
| 3593055 | 3542.1.1.0 ↗ | alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases | 0.52 | 37.0 | 2.63e-01 | 85.2% | 50.4% |
| 3739367 | 1002.1.1.1 ↗ | alpha complex topology › Fluoride ion channel › Fluoride ion channel › Fluoride ion channel › CRCB | 0.52 | 42.0 | 3.32e-01 | 100.0% | 71.1% |