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MK105819.1__AZB50522.1__X__00001

Bact-Vir

MK105819.1__AZB50522.1__X__00001

Identity

Accession:
MK105819 ↗
Kingdom:
phage

Quality

82.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Synechococcus_phage_S-H1

TaxID: 2488632

Cluster

View cluster (12 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-70
PDB
Domain cluster: rep: NC_002666.1__NP_076602.1__bIL285p30__00030__D8-67
CATH (59)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3k6yA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.76 54.0 4.53e-01 74.2% 90.7%
2vobB02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.73 65.0 4.54e-01 100.0% 39.3%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 55.0 5.42e-01 100.0% 76.8%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 51.0 5.70e-01 93.9% 100.0%
1wjqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 58.0 5.51e-01 98.5% 75.6%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 53.0 5.40e-01 97.0% 82.8%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 54.0 5.79e-01 98.5% 96.4%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.69 57.0 4.10e-01 92.4% 84.1%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 54.0 5.80e-01 97.0% 98.2%
3a2yA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.69 61.0 4.43e-01 100.0% 44.9%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 53.0 5.16e-01 100.0% 75.3%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 50.0 4.93e-01 98.5% 74.6%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.66 45.0 5.15e-01 93.9% 97.9%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 47.0 4.24e-01 92.4% 55.6%
1wjrA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 57.0 4.55e-01 98.5% 49.6%
4g54A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.65 53.0 4.29e-01 100.0% 47.2%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.65 51.0 5.32e-01 100.0% 98.3%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 48.0 5.05e-01 98.5% 90.0%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 57.0 5.56e-01 98.5% 94.4%
2ovsA00 2.40.128.380 Mainly Beta › Beta Barrel › Lipocalin › T3SS negative regulator GrlR 0.63 54.0 4.56e-01 98.5% 94.1%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 56.0 4.90e-01 98.5% 86.5%
4h75A00 2.80.10.70 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty 0.61 54.0 3.83e-01 100.0% 33.2%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 54.0 4.97e-01 98.5% 84.3%
2qeaB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 50.0 3.82e-01 100.0% 39.1%
3ic8A01 3.40.30.110 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.60 49.0 3.64e-01 100.0% 34.5%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 46.0 4.63e-01 100.0% 84.8%
1vw3C01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.60 54.0 4.29e-01 100.0% 67.2%
3hfnA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 46.0 4.81e-01 100.0% 95.0%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 46.0 4.67e-01 100.0% 87.9%
2gpjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.59 53.0 4.62e-01 100.0% 69.0%
1n26A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 44.0 4.27e-01 100.0% 70.5%
4dk0A02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.59 53.0 4.75e-01 100.0% 76.7%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.59 47.0 3.87e-01 93.9% 47.5%
1f39A00 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.59 42.0 3.75e-01 98.5% 51.5%
3fppA01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.58 52.0 4.49e-01 100.0% 71.2%
1lvoA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 40.0 3.76e-01 100.0% 55.7%
4tkoB01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.58 53.0 4.70e-01 100.0% 93.5%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.58 48.0 4.23e-01 100.0% 60.6%
6iikB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.58 48.0 3.05e-01 92.4% 32.6%
2l89A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 50.0 4.28e-01 100.0% 61.1%
2qpzA00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.56 49.0 4.24e-01 97.0% 87.4%
3gceA00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.56 49.0 4.22e-01 97.0% 88.5%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 45.0 4.68e-01 92.4% 93.5%
2e4qA00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.56 48.0 4.10e-01 97.0% 84.3%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 50.0 3.79e-01 100.0% 48.1%
2piaA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.56 49.0 4.26e-01 100.0% 64.4%
1ylnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 49.0 4.12e-01 100.0% 93.9%
3liuA01 2.60.40.3160 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 40.0 3.37e-01 100.0% 44.1%
2yrvA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 46.0 3.86e-01 98.5% 54.9%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.54 47.0 4.14e-01 100.0% 66.7%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 45.0 4.60e-01 98.5% 97.0%
5ejlA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.54 46.0 3.72e-01 93.9% 50.0%
1dleA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 38.0 3.13e-01 90.9% 38.8%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.53 46.0 4.42e-01 100.0% 87.0%
1iarB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 45.0 4.01e-01 98.5% 84.4%
5h9kA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 42.0 3.42e-01 100.0% 71.4%
1ukfA00 3.90.70.20 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.51 43.0 3.23e-01 100.0% 41.0%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 42.0 3.54e-01 98.5% 100.0%
5ja1B00 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.51 28.0 2.89e-01 92.4% 47.0%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3484822 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.74 61.0 5.72e-01 100.0% 73.8%
3620554 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 57.0 5.03e-01 98.5% 61.1%
4000280 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 53.0 5.75e-01 98.5% 96.4%
3398093 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.70 55.0 5.75e-01 100.0% 91.7%
3967090 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.70 50.0 4.72e-01 93.9% 62.5%
3398496 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.70 52.0 5.63e-01 97.0% 96.4%
5018860 219.1.1.28 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.69 61.0 4.72e-01 100.0% 52.0%
3571487 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 60.0 5.78e-01 100.0% 86.3%
3581696 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 47.0 5.23e-01 97.0% 96.0%
3928711 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 56.0 5.14e-01 100.0% 69.4%
3927363 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 47.0 5.24e-01 90.9% 96.0%
3765289 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.68 53.0 4.74e-01 100.0% 61.1%
3570399 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 59.0 6.01e-01 100.0% 98.5%
3709029 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 52.0 5.48e-01 98.5% 91.7%
4246480 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.67 50.0 4.40e-01 93.9% 54.7%
4938445 4.11.1.2 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.67 52.0 4.12e-01 100.0% 41.5%
4930890 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.67 53.0 5.11e-01 100.0% 76.0%
4105189 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.67 50.0 4.38e-01 93.9% 54.7%
4184660 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 52.0 4.15e-01 100.0% 43.1%
2570822 219.1.1.18 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 0.66 55.0 4.27e-01 100.0% 42.1%
3852545 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 53.0 5.52e-01 100.0% 95.0%
3958173 4294.1.1.0 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like 0.66 51.0 5.20e-01 93.9% 84.6%
3807651 4.1.1.158 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3444 0.66 60.0 5.00e-01 100.0% 73.6%
3712782 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 52.0 4.90e-01 98.5% 71.2%
3222051 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 53.0 5.41e-01 100.0% 89.2%
5054196 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.65 51.0 3.97e-01 100.0% 38.0%
4058174 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 52.0 5.31e-01 100.0% 89.2%
4009281 219.1.1.65 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › GspA_C39-like 0.65 53.0 4.55e-01 100.0% 56.2%
4196537 4.1.1.52 ↗ beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.65 57.0 5.50e-01 95.5% 85.3%
3214653 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 54.0 4.77e-01 97.0% 63.2%
5037849 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.65 54.0 4.38e-01 100.0% 48.8%
3839016 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 52.0 5.33e-01 100.0% 90.8%
3492757 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 57.0 5.61e-01 98.5% 92.9%
1482194 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.65 48.0 5.05e-01 98.5% 90.0%
3184235 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.64 55.0 4.34e-01 100.0% 49.7%
5034040 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 46.0 4.94e-01 97.0% 94.5%
3452625 1.1.7.69 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MOV-10_beta-barrel 0.63 56.0 4.83e-01 100.0% 65.0%
4974211 4.1.1.485 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6897 0.62 50.0 5.24e-01 100.0% 98.3%
3968312 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.61 52.0 4.38e-01 97.0% 56.5%
4505797 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.61 51.0 5.15e-01 100.0% 93.8%
4956474 284.1.1.9 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like › TrmI-like_N 0.61 54.0 5.34e-01 100.0% 98.6%
3971757 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.61 56.0 4.52e-01 100.0% 95.0%
3602921 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 44.0 4.65e-01 97.0% 92.7%
4293453 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 52.0 4.89e-01 100.0% 78.8%
3386975 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.61 55.0 4.54e-01 100.0% 95.7%
4940673 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 48.0 4.96e-01 100.0% 96.7%
3973076 109.1.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C 0.60 49.0 3.39e-01 98.5% 26.1%
4491893 4.1.1.7 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.60 54.0 4.60e-01 98.5% 68.9%
3736175 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 48.0 4.44e-01 97.0% 68.2%
5013683 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 45.0 4.69e-01 98.5% 91.7%
3967347 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.60 52.0 5.04e-01 100.0% 89.3%
1263519 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.60 47.0 4.88e-01 100.0% 95.2%
3933047 4.1.1.187 ↗ beta barrels › SH3 › SH3 › SH3 › DIRP 0.59 54.0 4.01e-01 100.0% 76.2%
3949052 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.59 53.0 4.82e-01 100.0% 75.6%
3668886 4.11.1.2 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.59 52.0 4.22e-01 100.0% 60.8%
4023955 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.59 52.0 4.26e-01 95.5% 83.5%
1778160 109.1.1.6 ↗ alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_2 0.59 48.0 3.30e-01 100.0% 25.4%
4658938 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.59 46.0 4.23e-01 100.0% 64.4%
4487967 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.59 49.0 4.31e-01 93.9% 77.0%
3244497 4.1.1.187 ↗ beta barrels › SH3 › SH3 › SH3 › DIRP 0.59 53.0 4.03e-01 100.0% 70.7%
4031542 66.1.1.2 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske_2 0.58 49.0 4.31e-01 93.9% 77.8%
4977702 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.58 51.0 4.68e-01 98.5% 74.1%
3339169 4.1.1.415 ↗ beta barrels › SH3 › SH3 › SH3 › PNPOx_N 0.58 50.0 4.64e-01 100.0% 82.4%
4565791 1.1.7.87 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 0.58 52.0 4.66e-01 100.0% 96.7%
4359892 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.58 46.0 4.36e-01 100.0% 73.8%
4957682 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.58 52.0 4.45e-01 100.0% 71.8%
4068333 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.57 48.0 4.86e-01 100.0% 95.4%
4660084 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.57 47.0 4.68e-01 100.0% 88.4%
3966494 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.57 43.0 3.69e-01 93.9% 50.0%
4476045 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.57 48.0 4.73e-01 100.0% 90.0%
4429329 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.56 47.0 4.77e-01 100.0% 95.4%
4527355 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.56 47.0 4.69e-01 100.0% 91.3%
3533960 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.56 49.0 4.08e-01 97.0% 80.9%
4026431 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 48.0 4.86e-01 100.0% 100.0%
4299932 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.56 46.0 4.65e-01 98.5% 93.8%
4302032 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.55 46.0 4.66e-01 100.0% 95.4%
4069793 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.55 46.0 4.56e-01 100.0% 88.6%
4118226 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 46.0 4.53e-01 100.0% 88.6%
1914511 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.55 44.0 3.58e-01 93.9% 46.5%
3035660 3794.1.1.1 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › PCC_BT 0.54 46.0 3.76e-01 100.0% 78.5%
3895715 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 44.0 4.08e-01 100.0% 80.0%
2552758 9.1.1.24 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_7 0.53 43.0 3.55e-01 97.0% 92.7%
4617893 11.1.1.185 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DBB 0.53 39.0 3.32e-01 100.0% 45.8%
3261164 11.1.1.802 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 0.52 45.0 4.09e-01 100.0% 82.2%
177194 11.1.1.165 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ATG19 0.52 38.0 3.40e-01 81.8% 93.2%
D2 high residues 72-125
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4dylA02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.80 69.0 5.70e-01 100.0% 54.3%
1b3qA01 1.10.287.560 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Histidine kinase CheA-like, homodimeric domain 0.79 56.0 5.41e-01 100.0% 66.1%
2x2vA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.76 63.0 5.88e-01 94.4% 77.9%
3q5dA02 1.20.58.420 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP 0.73 62.0 5.25e-01 100.0% 55.7%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.73 64.0 5.79e-01 100.0% 74.7%
2xokP00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.71 60.0 5.49e-01 100.0% 74.3%
2db7A01 6.10.250.980 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.69 55.0 5.61e-01 98.1% 94.3%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.68 62.0 5.43e-01 100.0% 81.0%
3axjB01 1.20.58.190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 0.68 59.0 4.31e-01 100.0% 34.8%
2js5A00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.68 56.0 5.07e-01 96.3% 67.6%
3v9rA00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.68 59.0 4.89e-01 100.0% 56.8%
2bg1A01 3.90.1310.40 Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › 0.67 49.0 4.42e-01 79.6% 58.4%
4i5sB03 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.64 55.0 4.99e-01 100.0% 72.0%
2mtqA00 1.20.58.130 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.63 46.0 4.19e-01 83.3% 57.5%
2a3qA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.62 51.0 4.10e-01 94.4% 45.1%
2oi2A02 3.30.70.890 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain 0.61 46.0 3.53e-01 85.2% 35.1%
4i9oA00 1.10.246.20 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain 0.59 45.0 4.10e-01 88.9% 64.1%
2jaeA03 1.20.1440.240 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.58 44.0 3.60e-01 83.3% 45.5%
1v4gA01 6.10.140.800 Special › Helix non-globular › Helix Hairpins › 0.53 42.0 3.95e-01 94.4% 72.5%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4623058 5043.1.1.0 ↗ extended segments › Sensor proteins transmembrane domains › Htr2 transmembrane domain-like › Htr2 transmembrane domain-like 0.83 70.0 6.61e-01 100.0% 76.9%
3959831 5067.1.1.0 ↗ alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain 0.83 71.0 5.05e-01 94.4% 34.0%
3486786 165.3.1.0 ↗ alpha duplicates or obligate multimers › Dimerisation interlock › Phenylalanine zipper › Phenylalanine zipper 0.77 63.0 6.27e-01 96.3% 87.3%
4329615 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.77 63.0 5.81e-01 100.0% 70.0%
3785340 7581.1.1.3 ↗ a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › ketoacyl-synt,Ketoacyl-synt_C 0.75 65.0 3.56e-01 96.3% 8.9%
3967813 5086.1.1.93 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_EMRA 0.74 66.0 4.90e-01 100.0% 40.8%
3386373 605.1.1.2 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › H-kinase_dim 0.73 65.0 6.14e-01 100.0% 81.5%
3811877 3937.1.1.0 ↗ alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 0.72 65.0 4.57e-01 100.0% 81.2%
3974231 5086.1.1.84 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND 0.71 65.0 5.90e-01 100.0% 75.7%
3641422 3567.1.1.0 ↗ a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.71 64.0 5.01e-01 100.0% 58.2%
3585791 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.70 59.0 5.29e-01 94.4% 66.7%
3304318 192.10.1.0 ↗ alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain 0.69 52.0 5.57e-01 79.6% 97.8%
3254515 6039.1.1.0 ↗ few secondary structure elements › CLIP domain › CLIP domain › CLIP domain 0.69 52.0 5.63e-01 83.3% 97.8%
5078048 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.67 59.0 5.24e-01 94.4% 70.7%
1675309 601.51.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-helical domain in phase 1 flagellin › alpha-helical domain in phase 1 flagellin › Flagellin_N 0.67 57.0 4.71e-01 100.0% 53.0%
3270040 101.1.16.0 ↗ alpha arrays › HTH › HTH › Ribosomal protein L11, C-terminal domain 0.65 47.0 4.14e-01 88.9% 51.2%