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MK112901.1__QDB70238.1__X__00081

Bact-Vir

MK112901.1__QDB70238.1__X__00081

Identity

Accession:
MK112901 ↗
Kingdom:
phage

Quality

90.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Skatevirus› Salmonella_virus_KFS-SE2

TaxID: 2583286

Cluster

View cluster (12 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 53-120
PDB
Domain cluster: representative
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3f2gA00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.69 47.0 3.32e-01 70.6% 29.3%
2hyjA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 44.0 5.01e-01 88.2% 95.7%
5gp9A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 44.0 5.07e-01 94.1% 93.8%
2f07B00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.68 46.0 3.33e-01 94.1% 24.5%
3cdlA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 48.0 5.32e-01 98.5% 94.4%
6el2B01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 45.0 5.09e-01 92.6% 95.9%
5jbrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 51.0 4.77e-01 82.4% 84.9%
2iaiA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 46.0 4.70e-01 86.8% 73.8%
2lvsA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 46.0 5.19e-01 98.5% 98.0%
3mvpA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 44.0 5.08e-01 91.2% 100.0%
4jykA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 47.0 5.02e-01 98.5% 89.7%
2qwtA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.65 48.0 3.61e-01 98.5% 32.3%
3bniB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.64 44.0 3.31e-01 94.1% 28.7%
2dg8D00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.63 44.0 3.32e-01 94.1% 28.9%
3htaC00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.63 46.0 3.41e-01 98.5% 28.6%
2fd5A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 41.0 4.64e-01 89.7% 95.8%
3f1bA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 45.0 3.36e-01 98.5% 29.0%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.62 44.0 4.75e-01 82.4% 91.1%
1rktA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 40.0 4.41e-01 92.6% 86.8%
2o3fA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 45.0 4.26e-01 98.5% 65.9%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.59 43.0 4.68e-01 85.3% 100.0%
1l0oC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 44.0 4.70e-01 95.6% 96.5%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 46.0 3.63e-01 89.7% 50.3%
2pmiB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.55 46.0 3.31e-01 95.6% 46.9%
3rf7A02 1.20.1090.10 Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain 0.54 45.0 3.47e-01 98.5% 99.4%
4krdB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.54 45.0 3.35e-01 95.6% 55.8%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 43.0 4.44e-01 95.6% 92.4%
1t5jA00 1.10.4080.10 Mainly Alpha › Orthogonal Bundle › ADP-ribosylglycohydrolase fold › ADP-ribosylation/Crystallin J1 0.54 40.0 2.65e-01 80.9% 21.9%
1o57A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 45.0 4.45e-01 94.1% 94.4%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.53 36.0 3.80e-01 70.6% 87.5%
2cfoA05 1.10.10.350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.50 44.0 3.83e-01 98.5% 67.3%
3aagA01 3.40.1380.40 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › 0.50 39.0 3.13e-01 86.8% 85.3%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5048466 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.70 50.0 4.01e-01 76.5% 59.3%
3959011 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.69 44.0 5.24e-01 89.7% 100.0%
3291657 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.69 48.0 4.80e-01 97.1% 71.4%
4068173 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.68 49.0 4.77e-01 98.5% 69.3%
4952959 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.68 46.0 4.60e-01 70.6% 75.7%
3969964 101.1.2.110 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.68 46.0 4.29e-01 70.6% 69.4%
3278979 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.67 47.0 4.56e-01 97.1% 66.7%
5024927 101.1.2.275 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF1495 0.66 45.0 3.95e-01 70.6% 68.6%
3210747 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.66 40.0 4.69e-01 94.1% 91.1%
4875606 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.66 46.0 4.49e-01 94.1% 66.2%
4094272 101.1.1.2 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.66 46.0 5.01e-01 98.5% 92.7%
3974067 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.66 42.0 4.78e-01 86.8% 97.8%
3588151 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 49.0 4.99e-01 100.0% 84.6%
4876060 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.64 43.0 4.16e-01 95.6% 60.3%
3424337 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.64 45.0 4.33e-01 75.0% 91.3%
5054427 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.64 49.0 3.94e-01 85.3% 69.0%
4966962 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 47.0 5.16e-01 98.5% 100.0%
3968298 101.1.1.2 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.64 46.0 4.93e-01 92.6% 94.5%
3452698 101.1.10.37 ↗ alpha arrays › HTH › HTH › Cyclin-like › PF26138 0.63 49.0 4.40e-01 83.8% 90.5%
3383803 101.1.3.12 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › PF26138 0.63 49.0 4.32e-01 83.8% 88.0%
2529 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.63 45.0 4.40e-01 98.5% 68.4%
3283805 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.63 45.0 4.53e-01 98.5% 74.3%
5014461 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 39.0 4.51e-01 86.8% 93.3%
4954772 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.63 46.0 4.99e-01 95.6% 96.4%
4121950 101.1.1.2 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.63 45.0 4.82e-01 97.1% 94.5%
3946840 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.62 40.0 4.63e-01 88.2% 100.0%
3279518 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.62 46.0 4.44e-01 98.5% 68.8%
4008367 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.62 46.0 5.02e-01 97.1% 100.0%
3966444 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.62 44.0 4.08e-01 98.5% 57.8%
3987671 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.62 46.0 4.97e-01 97.1% 100.0%
3930155 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 45.0 3.85e-01 76.5% 71.8%
3284909 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.61 46.0 4.40e-01 98.5% 68.8%
3282864 101.1.1.2 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.61 45.0 4.59e-01 95.6% 83.1%
4323671 105.1.1.0 ↗ alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain 0.60 50.0 4.32e-01 100.0% 56.5%
5049700 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 44.0 4.08e-01 80.9% 76.7%
3279079 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.59 41.0 3.99e-01 92.6% 63.7%
139963 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.59 43.0 4.68e-01 85.3% 100.0%
4980214 4156.1.1.0 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like 0.56 48.0 3.95e-01 97.1% 75.4%
3302992 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.56 48.0 3.52e-01 95.6% 53.5%
3328518 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.56 47.0 3.51e-01 95.6% 53.0%
3707336 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.56 47.0 3.34e-01 95.6% 44.4%
3253586 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.55 46.0 3.70e-01 95.6% 67.6%
3716640 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.55 47.0 3.45e-01 95.6% 52.1%
3718570 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.54 42.0 3.56e-01 86.8% 71.2%
2966577 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.54 42.0 4.28e-01 100.0% 89.4%
3614003 4156.1.1.0 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like 0.53 43.0 3.07e-01 98.5% 28.6%
5067100 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.52 41.0 3.96e-01 95.6% 96.5%
1612056 101.1.2.6 ↗ alpha arrays › HTH › HTH › winged helix domain › GntR 0.51 42.0 3.88e-01 100.0% 69.6%