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MK138526.1__AZF89612.1__X__00001

Bact-Vir

MK138526.1__AZF89612.1__X__00001

Identity

Accession:
MK138526 ↗
Kingdom:
phage

Quality

78.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vandenendeviridae› Pakpunavirus› Pseudomonas_phage_vB_PaeM_LCK69

TaxID: 2488595

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 202-280
PDB
Domain cluster: rep: JSantini_GMIN_scaffold_8_prodigal-single.1__X__X__00265__D133-216
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vloA04 2.40.30.110 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains 0.60 40.0 3.81e-01 89.9% 59.3%
2wqpA02 3.90.1210.10 Alpha Beta › Alpha-Beta Complex › Type Iii Antifreeze Protein Isoform Hplc 12 › Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain 0.56 38.0 3.96e-01 70.9% 79.5%
2k52A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 38.0 3.91e-01 84.8% 75.7%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5083817 70.4.1.0 ↗ beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) 0.60 43.0 4.72e-01 75.9% 100.0%
4588640 70.3.1.3 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SAF 0.58 39.0 4.13e-01 70.9% 88.6%
3393782 70.3.1.3 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SAF 0.57 39.0 4.27e-01 70.9% 95.0%
4159528 70.3.1.3 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SAF 0.57 39.0 4.08e-01 70.9% 81.4%
5006716 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.56 37.0 3.62e-01 84.8% 62.4%
4942460 70.3.1.3 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SAF 0.56 38.0 4.06e-01 70.9% 82.6%
224541 70.3.1.3 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SAF 0.56 38.0 4.04e-01 70.9% 85.3%
4059805 2.1.1.14 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.51 31.0 3.40e-01 87.3% 73.8%
4618288 4186.1.1.1 ↗ beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p 0.51 42.0 4.29e-01 89.9% 93.7%