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AZF89963.1
Arc-VirMK170447__AZF89963.1__X__00044
Identity
- Accession:
- MK170447 ↗
- Protein ID:
- AZF89963.1 ↗
- Kingdom:
- archaea
Quality
77.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-53
Domain cluster:
representative
CATH (58)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qz8A01 | 2.40.10.250 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 | 0.73 | 59.0 | 4.73e-01 | 90.6% | 57.1% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.73 | 63.0 | 4.57e-01 | 98.1% | 83.0% |
| 2j3vA02 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.70 | 60.0 | 4.04e-01 | 100.0% | 63.7% |
| 6toaF01 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.69 | 55.0 | 4.29e-01 | 94.3% | 63.8% |
| 1dw9A02 | 3.30.1160.10 | Alpha Beta › 2-Layer Sandwich › Cyanate Lyase; Chain: A, domain 2 › Cyanate lyase, C-terminal domain | 0.69 | 53.0 | 4.90e-01 | 84.9% | 85.3% |
| 3e23A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.69 | 57.0 | 3.89e-01 | 96.2% | 50.0% |
| 3sm3A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.68 | 58.0 | 3.89e-01 | 98.1% | 59.4% |
| 1d5aA01 | 3.30.342.10 | Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 | 0.68 | 54.0 | 4.01e-01 | 92.5% | 52.3% |
| 5ejlA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.67 | 56.0 | 4.34e-01 | 96.2% | 56.5% |
| 5aj3E01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.67 | 47.0 | 4.21e-01 | 77.4% | 61.7% |
| 2y8yA02 | 3.30.70.1210 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 | 0.65 | 54.0 | 4.34e-01 | 98.1% | 68.7% |
| 2bi0A01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.64 | 50.0 | 3.68e-01 | 88.7% | 85.6% |
| 2ii3A01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.64 | 51.0 | 3.52e-01 | 96.2% | 79.9% |
| 1vq8R00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.63 | 50.0 | 3.78e-01 | 96.2% | 90.7% |
| 4e98C00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 50.0 | 4.17e-01 | 96.2% | 98.1% |
| 3c0wA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.62 | 53.0 | 4.08e-01 | 96.2% | 52.5% |
| 3ahpA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 50.0 | 4.16e-01 | 98.1% | 99.1% |
| 4i6yA02 | 3.30.70.420 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain | 0.61 | 49.0 | 4.00e-01 | 94.3% | 66.4% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.61 | 48.0 | 3.37e-01 | 96.2% | 46.2% |
| 2wyhA05 | 2.60.40.2210 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 48.0 | 3.63e-01 | 88.7% | 68.7% |
| 2i6gB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 48.0 | 3.39e-01 | 96.2% | 88.9% |
| 3x1lB03 | 2.60.40.4350 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 49.0 | 4.13e-01 | 100.0% | 64.8% |
| 7r5mA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.60 | 47.0 | 3.23e-01 | 92.5% | 77.6% |
| 2vlgC00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.60 | 47.0 | 3.98e-01 | 94.3% | 99.0% |
| 2ab5B01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.60 | 50.0 | 3.85e-01 | 98.1% | 57.8% |
| 4m3sA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.59 | 48.0 | 3.49e-01 | 92.5% | 52.2% |
| 1ciyA02 | 2.100.10.10 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain | 0.59 | 47.0 | 3.29e-01 | 94.3% | 98.5% |
| 3l60A01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.59 | 45.0 | 3.21e-01 | 96.2% | 80.0% |
| 1vwxP00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.59 | 47.0 | 3.59e-01 | 100.0% | 90.8% |
| 3lvtA03 | 2.60.40.2210 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 47.0 | 3.76e-01 | 100.0% | 71.3% |
| 7pzoA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.58 | 47.0 | 3.96e-01 | 94.3% | 67.7% |
| 2nlkA02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.58 | 46.0 | 3.02e-01 | 92.5% | 20.4% |
| 7k0xA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 46.0 | 4.22e-01 | 96.2% | 70.5% |
| 3vmnA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.57 | 45.0 | 3.46e-01 | 94.3% | 45.1% |
| 1vs3A02 | 3.30.70.660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain | 0.56 | 44.0 | 3.41e-01 | 94.3% | 61.1% |
| 3dwoX00 | 2.40.160.60 | Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) | 0.56 | 42.0 | 2.48e-01 | 83.0% | 18.0% |
| 1ekrA00 | 3.30.70.640 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Molybdopterin cofactor biosynthesis C (MoaC) domain | 0.56 | 44.0 | 3.39e-01 | 94.3% | 59.4% |
| 3u83A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 45.0 | 3.82e-01 | 98.1% | 66.3% |
| 3ayhB01 | 3.30.1490.120 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase Rpb7-like, N-terminal domain | 0.56 | 45.0 | 4.06e-01 | 96.2% | 86.1% |
| 4q52A00 | 2.60.40.3910 | Mainly Beta › Sandwich › Immunoglobulin-like › Inclusion body protein | 0.55 | 46.0 | 3.31e-01 | 100.0% | 80.6% |
| 4v19W00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.55 | 45.0 | 3.28e-01 | 98.1% | 59.0% |
| 1ilvA00 | 3.40.1210.10 | Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase | 0.54 | 38.0 | 2.60e-01 | 77.4% | 52.2% |
| 3io1A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 44.0 | 3.56e-01 | 98.1% | 63.8% |
| 2fwvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 37.0 | 2.60e-01 | 73.6% | 20.0% |
| 3o4oB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 44.0 | 3.60e-01 | 98.1% | 59.6% |
| 6qdws00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.53 | 43.0 | 3.55e-01 | 96.2% | 93.6% |
| 2vtwA00 | 2.60.90.30 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Fiber protein 1, C-terminal domain | 0.53 | 40.0 | 2.92e-01 | 94.3% | 52.2% |
| 7sxqA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.53 | 36.0 | 2.39e-01 | 73.6% | 80.2% |
| 4x28C02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.53 | 40.0 | 3.35e-01 | 86.8% | 58.4% |
| 4of8A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 42.0 | 3.59e-01 | 100.0% | 59.2% |
| 5ib9A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.52 | 39.0 | 2.62e-01 | 90.6% | 34.7% |
| 3pfeA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 43.0 | 3.34e-01 | 98.1% | 71.5% |
| 2p8jA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 40.0 | 2.93e-01 | 100.0% | 94.7% |
| 2f7vA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 42.0 | 3.50e-01 | 98.1% | 70.4% |
| 3gb0A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 42.0 | 3.42e-01 | 96.2% | 64.3% |
| 5x8tT00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.51 | 42.0 | 3.21e-01 | 98.1% | 67.4% |
| 3iuzA00 | 3.10.180.50 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › | 0.50 | 39.0 | 2.56e-01 | 98.1% | 70.6% |
| 6w1kA01 | 3.10.180.50 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › | 0.50 | 41.0 | 2.65e-01 | 98.1% | 80.5% |
ECOD (72)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4118093 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.79 | 70.0 | 4.94e-01 | 98.1% | 80.0% |
| 4968263 | 1.1.5.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_C | 0.77 | 67.0 | 4.38e-01 | 98.1% | 50.5% |
| 3946057 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.77 | 65.0 | 4.28e-01 | 96.2% | 43.9% |
| 5067070 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.76 | 66.0 | 4.85e-01 | 98.1% | 72.9% |
| 5027270 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.75 | 65.0 | 4.53e-01 | 98.1% | 61.1% |
| 3948250 | 304.124.1.9 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_terminator_9 | 0.75 | 63.0 | 4.55e-01 | 96.2% | 65.2% |
| 3602499 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.74 | 64.0 | 4.81e-01 | 98.1% | 71.5% |
| 4992907 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.74 | 64.0 | 4.61e-01 | 98.1% | 64.5% |
| 4659258 | 2003.1.5.51 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TPMT | 0.74 | 64.0 | 4.28e-01 | 100.0% | 45.1% |
| 4034134 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.72 | 57.0 | 4.42e-01 | 90.6% | 64.8% |
| 4988254 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.72 | 60.0 | 4.23e-01 | 98.1% | 56.7% |
| 3943282 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.72 | 59.0 | 4.68e-01 | 98.1% | 82.5% |
| 5077779 | 2003.1.5.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › BpsA_C | 0.71 | 59.0 | 3.82e-01 | 98.1% | 66.5% |
| 3711349 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.70 | 59.0 | 3.60e-01 | 98.1% | 39.8% |
| 143936 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.69 | 56.0 | 3.81e-01 | 94.3% | 59.0% |
| 3963489 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.69 | 60.0 | 4.37e-01 | 100.0% | 49.3% |
| 4241225 | 304.102.1.6 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 | 0.69 | 57.0 | 3.54e-01 | 96.2% | 53.8% |
| 3699728 | 878.1.1.0 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 | 0.68 | 56.0 | 4.40e-01 | 96.2% | 77.5% |
| 3599842 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.67 | 55.0 | 4.41e-01 | 94.3% | 53.0% |
| 3170700 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.66 | 56.0 | 3.42e-01 | 100.0% | 80.8% |
| 3509860 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.66 | 55.0 | 3.51e-01 | 94.3% | 38.5% |
| 5057186 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.65 | 54.0 | 4.70e-01 | 100.0% | 65.6% |
| 4934212 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.65 | 52.0 | 4.46e-01 | 94.3% | 93.7% |
| 2407461 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.65 | 53.0 | 4.12e-01 | 98.1% | 75.6% |
| 3018445 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.64 | 52.0 | 3.49e-01 | 96.2% | 64.8% |
| 3923825 | 323.1.1.1 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › 2-oxoacid_dh | 0.64 | 51.0 | 3.45e-01 | 96.2% | 73.1% |
| 2449257 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.64 | 53.0 | 3.42e-01 | 100.0% | 29.2% |
| 3025136 | 218.2.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Ribosomal protein L22 › Ribosomal protein L22 › Ribosomal_L22 | 0.63 | 53.0 | 3.93e-01 | 100.0% | 90.3% |
| 4966689 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.63 | 54.0 | 3.28e-01 | 100.0% | 34.5% |
| 4976892 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.63 | 50.0 | 3.42e-01 | 90.6% | 51.9% |
| 3795831 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.63 | 53.0 | 4.96e-01 | 98.1% | 89.7% |
| 4994537 | 218.2.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Ribosomal protein L22 › Ribosomal protein L22 › Ribosomal_L22 | 0.63 | 51.0 | 3.70e-01 | 100.0% | 75.0% |
| 3990851 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.63 | 50.0 | 4.86e-01 | 100.0% | 80.0% |
| 3501742 | 2485.3.1.21 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phi29_MCP | 0.63 | 52.0 | 3.34e-01 | 100.0% | 73.5% |
| 4189243 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.63 | 50.0 | 3.96e-01 | 96.2% | 53.1% |
| 3253396 | 868.1.1.2 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase | 0.63 | 54.0 | 3.66e-01 | 100.0% | 52.2% |
| 4287081 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.63 | 50.0 | 4.01e-01 | 98.1% | 80.8% |
| 4670273 | 868.1.1.8 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › SLS1_C | 0.62 | 52.0 | 3.44e-01 | 100.0% | 49.6% |
| 3995786 | 389.4.1.7 ↗ | few secondary structure elements › EGF-like › Fibulin-4 EGF-like 1 domain › Fibulin-4 EGF-like 1 domain › TIL_2 | 0.62 | 50.0 | 4.82e-01 | 100.0% | 78.5% |
| 3602774 | 304.51.1.8 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas6b_C | 0.62 | 50.0 | 4.02e-01 | 94.3% | 72.2% |
| 3192615 | 868.1.1.8 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › SLS1_C | 0.62 | 51.0 | 3.23e-01 | 100.0% | 51.9% |
| 3943661 | 304.5.1.13 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF3574 | 0.61 | 48.0 | 4.06e-01 | 92.5% | 66.0% |
| 4640974 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.61 | 48.0 | 3.90e-01 | 96.2% | 83.3% |
| 5050618 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.61 | 51.0 | 3.91e-01 | 100.0% | 61.4% |
| 4632598 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 47.0 | 3.89e-01 | 98.1% | 53.3% |
| 3995923 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.60 | 46.0 | 3.05e-01 | 92.5% | 61.3% |
| 5000462 | 256.1.1.1 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease | 0.59 | 48.0 | 4.36e-01 | 100.0% | 86.3% |
| 5039496 | 101.1.2.914 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6015 | 0.59 | 47.0 | 3.96e-01 | 88.7% | 95.6% |
| 1312442 | 12.1.1.43 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_38 | 0.58 | 47.0 | 3.89e-01 | 100.0% | 80.2% |
| 1396465 | 12.1.1.43 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_38 | 0.58 | 47.0 | 3.81e-01 | 100.0% | 82.4% |
| 3934347 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 47.0 | 3.85e-01 | 100.0% | 90.4% |
| 3340998 | 323.1.1.1 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › 2-oxoacid_dh | 0.57 | 44.0 | 3.03e-01 | 92.5% | 70.6% |
| 4997963 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.57 | 49.0 | 4.00e-01 | 100.0% | 55.2% |
| 5065450 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 46.0 | 3.39e-01 | 92.5% | 55.5% |
| 3353115 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.57 | 47.0 | 3.12e-01 | 100.0% | 67.3% |
| 3194998 | 4178.1.1.3 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › DUF4140 | 0.56 | 43.0 | 3.41e-01 | 94.3% | 66.7% |
| 5038450 | 3435.1.1.0 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC | 0.56 | 40.0 | 2.70e-01 | 84.9% | 35.2% |
| 4965450 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.56 | 44.0 | 3.69e-01 | 98.1% | 70.9% |
| 3521712 | 109.6.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF | 0.55 | 45.0 | 2.81e-01 | 96.2% | 18.1% |
| 5039316 | 304.102.1.2 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruD | 0.55 | 44.0 | 3.04e-01 | 94.3% | 75.2% |
| 3609057 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 42.0 | 3.31e-01 | 96.2% | 60.7% |
| 4016759 | 3385.1.1.0 ↗ | beta barrels › Allergen Alt a 1 › Allergen Alt a 1 › Allergen Alt a 1 | 0.54 | 43.0 | 3.32e-01 | 94.3% | 94.3% |
| 4273561 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.54 | 43.0 | 3.40e-01 | 98.1% | 58.5% |
| 3988859 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.53 | 41.0 | 3.46e-01 | 92.5% | 68.6% |
| 3599732 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.53 | 44.0 | 2.94e-01 | 96.2% | 80.7% |
| 3473036 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 42.0 | 3.38e-01 | 100.0% | 72.8% |
| 3320569 | 207.1.1.29 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › Transp_inhibit | 0.52 | 43.0 | 2.46e-01 | 90.6% | 14.2% |
| 4246955 | 218.2.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Ribosomal protein L22 › Ribosomal protein L22 › Ribosomal_L22 | 0.51 | 41.0 | 3.08e-01 | 96.2% | 63.4% |
| 4602130 | 218.2.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Ribosomal protein L22 › Ribosomal protein L22 › Ribosomal_L22 | 0.51 | 41.0 | 3.20e-01 | 98.1% | 68.9% |
| 4210343 | 218.2.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Ribosomal protein L22 › Ribosomal protein L22 › Ribosomal_L22 | 0.51 | 40.0 | 3.38e-01 | 96.2% | 93.6% |
| 3742620 | 11.1.5.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub | 0.50 | 38.0 | 3.09e-01 | 84.9% | 53.9% |
| 3927922 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.50 | 38.0 | 2.95e-01 | 90.6% | 92.4% |
D2
medium
residues 54-112
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rp3A01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.74 | 49.0 | 4.39e-01 | 100.0% | 48.2% |
| 1wfdA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.72 | 57.0 | 4.89e-01 | 91.5% | 54.8% |
| 2ktmA00 | 1.10.790.10 | Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain | 0.72 | 49.0 | 4.69e-01 | 100.0% | 61.8% |
| 4jgiA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.71 | 52.0 | 4.74e-01 | 94.9% | 58.7% |
| 1yhuB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.68 | 61.0 | 4.49e-01 | 96.6% | 68.1% |
| 1nafA02 | 1.20.58.160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 51.0 | 4.55e-01 | 100.0% | 58.8% |
| 3h36A00 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.65 | 50.0 | 4.55e-01 | 100.0% | 62.8% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.64 | 56.0 | 5.20e-01 | 100.0% | 84.4% |
| 3u3iA02 | 1.20.58.1110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 52.0 | 4.32e-01 | 100.0% | 50.0% |
| 4g1tA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.64 | 40.0 | 4.03e-01 | 91.5% | 62.3% |
| 1or7B01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.63 | 47.0 | 4.08e-01 | 94.9% | 51.1% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.63 | 54.0 | 4.47e-01 | 100.0% | 95.5% |
| 2l3lA01 | 1.20.58.1250 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain | 0.63 | 48.0 | 4.04e-01 | 100.0% | 48.1% |
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 52.0 | 4.04e-01 | 100.0% | 40.1% |
| 5svlA01 | 1.10.287.940 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › atp-gated p2x4 ion channel | 0.62 | 53.0 | 5.12e-01 | 98.3% | 86.8% |
| 1iuqA01 | 1.10.1200.50 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glycerol-3-phosphate acyltransferase, alpha helical bundle, N-terminal | 0.62 | 43.0 | 4.03e-01 | 100.0% | 57.9% |
| 2go7A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.61 | 51.0 | 4.97e-01 | 93.2% | 97.0% |
| 6qumQ00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.61 | 51.0 | 4.80e-01 | 100.0% | 78.4% |
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 46.0 | 4.30e-01 | 81.4% | 65.8% |
| 4ev6A03 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.61 | 51.0 | 5.16e-01 | 100.0% | 94.8% |
| 1s35A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 51.0 | 4.33e-01 | 100.0% | 55.4% |
| 4ga0A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 43.0 | 3.26e-01 | 74.6% | 73.4% |
| 2p1aB01 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.61 | 50.0 | 3.82e-01 | 93.2% | 85.6% |
| 5b1oA00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.60 | 47.0 | 4.58e-01 | 88.1% | 78.5% |
| 4fppB01 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.60 | 51.0 | 4.89e-01 | 100.0% | 81.7% |
| 2odmA00 | 1.10.287.750 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like | 0.59 | 47.0 | 4.35e-01 | 94.9% | 67.1% |
| 3kbbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.59 | 46.0 | 4.36e-01 | 84.7% | 100.0% |
| 3g3oA00 | 3.20.100.30 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › VTC, catalytic tunnel domain | 0.58 | 41.0 | 2.69e-01 | 86.4% | 15.7% |
| 2k3oA00 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.57 | 47.0 | 3.82e-01 | 98.3% | 77.5% |
| 3j27B00 | 1.10.8.970 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Flavivirus envelope glycoprotein M-like | 0.57 | 40.0 | 3.77e-01 | 81.4% | 61.1% |
| 1lkvX02 | 1.10.220.30 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Flagellar motor switch protein FliG, alpha-alpha superhelical domain | 0.57 | 44.0 | 3.56e-01 | 89.8% | 60.6% |
| 2hxiB02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 50.0 | 3.85e-01 | 100.0% | 96.3% |
| 3bg2A01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.56 | 47.0 | 3.28e-01 | 98.3% | 28.6% |
| 1w36F02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.55 | 45.0 | 3.79e-01 | 89.8% | 96.0% |
| 1m5yA01 | 1.10.4030.10 | Mainly Alpha › Orthogonal Bundle › Triger factor/SurA peptide-binding fold › Porin chaperone SurA, peptide-binding domain | 0.54 | 48.0 | 3.68e-01 | 94.9% | 46.8% |
| 1sg7A00 | 1.10.1740.70 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › ChaB | 0.54 | 45.0 | 4.17e-01 | 96.6% | 72.0% |
| 2xzmV01 | 1.10.60.20 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 | 0.50 | 36.0 | 3.64e-01 | 100.0% | 73.8% |
| 3l8kA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 41.0 | 2.92e-01 | 100.0% | 39.2% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4410658 | 4246.1.1.2 ↗ | a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_1 | 0.71 | 53.0 | 3.15e-01 | 89.8% | 11.3% |
| 3775580 | 601.1.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Vinculin | 0.70 | 63.0 | 5.80e-01 | 100.0% | 98.7% |
| 3784716 | 109.4.1.602 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Dor1 | 0.69 | 54.0 | 3.51e-01 | 100.0% | 18.5% |
| 3690687 | 622.1.1.0 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain | 0.69 | 55.0 | 5.08e-01 | 96.6% | 69.3% |
| 5050356 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.68 | 56.0 | 5.36e-01 | 93.2% | 90.0% |
| 3894917 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.68 | 58.0 | 4.61e-01 | 100.0% | 47.5% |
| 4329615 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.67 | 55.0 | 5.23e-01 | 100.0% | 75.7% |
| 3214359 | 568.1.1.0 ↗ | few secondary structure elements › p8-MTCP1-related › p8-MTCP1-related › p8-MTCP1-related | 0.67 | 48.0 | 5.11e-01 | 89.8% | 90.0% |
| 3780807 | 174.1.1.52 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › PF27925 | 0.67 | 55.0 | 4.28e-01 | 100.0% | 41.5% |
| 3838316 | 3567.1.1.150 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › H-kinase_dim | 0.66 | 57.0 | 5.26e-01 | 98.3% | 74.7% |
| 3462297 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 59.0 | 5.46e-01 | 100.0% | 80.0% |
| 3999040 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.66 | 59.0 | 4.23e-01 | 100.0% | 35.3% |
| 5019215 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.65 | 58.0 | 3.65e-01 | 100.0% | 19.4% |
| 3963155 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.65 | 55.0 | 5.11e-01 | 94.9% | 77.3% |
| 3530780 | 310.2.1.2 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › MIX23 | 0.65 | 57.0 | 4.42e-01 | 100.0% | 46.2% |
| 4017010 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.65 | 57.0 | 4.35e-01 | 100.0% | 100.0% |
| 3817153 | 4207.1.1.0 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) | 0.65 | 57.0 | 4.74e-01 | 100.0% | 56.2% |
| 3386452 | 5050.1.1.21 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › FTR1 | 0.64 | 56.0 | 4.25e-01 | 100.0% | 64.8% |
| 3652633 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.64 | 57.0 | 4.43e-01 | 100.0% | 80.0% |
| 3883670 | 604.1.1.7 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SR_plectin_7 | 0.64 | 57.0 | 4.51e-01 | 100.0% | 61.7% |
| 3231463 | 632.8.1.2 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › Alpha-2-MRAP_C | 0.64 | 56.0 | 4.81e-01 | 100.0% | 92.6% |
| 3386373 | 605.1.1.2 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › H-kinase_dim | 0.64 | 56.0 | 5.42e-01 | 96.6% | 89.2% |
| 3581267 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.64 | 53.0 | 4.68e-01 | 100.0% | 62.2% |
| 3740232 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.64 | 52.0 | 3.97e-01 | 100.0% | 38.6% |
| 4944401 | 150.1.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin | 0.63 | 52.0 | 3.91e-01 | 94.9% | 84.5% |
| 4933825 | 5058.1.1.16 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st_1 | 0.63 | 56.0 | 4.71e-01 | 100.0% | 70.0% |
| 4133341 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.63 | 55.0 | 4.41e-01 | 100.0% | 50.0% |
| 143217 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.63 | 54.0 | 4.58e-01 | 100.0% | 58.2% |
| 3283686 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.62 | 48.0 | 4.62e-01 | 91.5% | 74.3% |
| 5059279 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.62 | 52.0 | 4.71e-01 | 98.3% | 67.5% |
| 3224580 | 3538.1.1.0 ↗ | extended segments › MerF › MerF › MerF | 0.61 | 50.0 | 5.01e-01 | 89.8% | 90.0% |
| 3286412 | 5058.1.1.16 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st_1 | 0.61 | 53.0 | 4.52e-01 | 100.0% | 70.0% |
| 3657573 | 109.4.1.1146 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_PUB | 0.60 | 46.0 | 2.82e-01 | 84.7% | 12.1% |
| 4375453 | 622.4.1.26 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › HisKA | 0.60 | 50.0 | 4.72e-01 | 100.0% | 76.0% |
| 5053424 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.60 | 50.0 | 3.52e-01 | 91.5% | 32.6% |
| 3396401 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.58 | 49.0 | 4.02e-01 | 100.0% | 50.4% |
| 4179237 | 6028.1.1.0 ↗ | alpha bundles › Ribosome modulation factor › Ribosome modulation factor › Ribosome modulation factor | 0.57 | 49.0 | 4.76e-01 | 94.9% | 84.6% |
| 3240454 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.55 | 45.0 | 3.94e-01 | 100.0% | 60.0% |
| 5079025 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.54 | 40.0 | 3.87e-01 | 86.4% | 68.6% |
| 4964044 | 5058.1.1.16 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st_1 | 0.54 | 46.0 | 3.95e-01 | 100.0% | 61.0% |
| 3602030 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.53 | 47.0 | 4.03e-01 | 98.3% | 61.1% |