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AZF89966.1

Arc-Vir

MK170447__AZF89966.1__X__00019

Identity

Accession:
MK170447 ↗
Protein ID:
AZF89966.1 ↗
Kingdom:
archaea

Quality

85.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Methanosarcina_virus_MetMV

TaxID: 2488574

Cluster

View cluster (51 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-75
PDB
Domain cluster: rep: IMGVR_UViG_3300032006_002050-3300032006-Ga0310344_100038483__D2-86
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3by7E00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.81 71.0 7.12e-01 100.0% 93.4%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.75 55.0 5.85e-01 90.5% 87.9%
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 47.0 5.20e-01 90.5% 91.2%
1d3bB00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 51.0 5.02e-01 93.2% 86.4%
1kf6A04 4.10.80.40 Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › succinate dehydrogenase protein domain 0.60 30.0 3.92e-01 74.3% 100.0%
4jglA00 2.40.128.530 Mainly Beta › Beta Barrel › Lipocalin › 0.59 50.0 4.10e-01 100.0% 75.0%
1wbaA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.58 46.0 3.54e-01 86.5% 91.8%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 43.0 4.56e-01 90.5% 90.9%
2f96A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.55 44.0 3.32e-01 90.5% 87.1%
1wyuA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.55 44.0 3.07e-01 90.5% 85.1%
5w8mA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.54 38.0 2.81e-01 73.0% 96.9%
1ntyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 42.0 3.64e-01 87.8% 77.4%
1vlrA01 3.30.200.40 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Scavenger mRNA decapping enzyme, N-terminal domain 0.54 36.0 3.36e-01 70.3% 91.8%
4f3nA00 3.40.50.12710 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 40.0 2.58e-01 83.8% 59.4%
1ry6A00 3.40.850.10 Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain 0.52 39.0 2.55e-01 79.7% 91.2%
1se8A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 36.0 3.25e-01 77.0% 85.6%
ECOD (28)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3832288 4.1.1.81 ↗ beta barrels › SH3 › SH3 › SH3 › LSM14 0.69 57.0 5.44e-01 93.2% 80.0%
4024727 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 53.0 4.71e-01 93.2% 59.6%
5003274 4.1.1.222 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6948 0.67 60.0 5.62e-01 100.0% 93.3%
3965254 4.1.1.222 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6948 0.67 60.0 5.53e-01 100.0% 86.3%
3786067 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.66 55.0 5.35e-01 93.2% 82.5%
3712189 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.65 55.0 5.14e-01 93.2% 75.6%
4028518 511.1.1.0 ↗ beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain 0.63 44.0 3.59e-01 73.0% 65.9%
3618922 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.60 52.0 4.80e-01 95.9% 76.8%
3811668 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 29.0 3.99e-01 83.8% 87.5%
4932882 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.60 49.0 4.02e-01 90.5% 57.8%
224086 9.18.1.0 ↗ beta barrels › Lipocalins/Streptavidin 0.59 50.0 4.10e-01 100.0% 75.0%
3430637 5.1.3.142 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.59 45.0 2.96e-01 82.4% 34.5%
3800269 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.58 45.0 3.64e-01 85.1% 97.3%
3703463 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.58 45.0 2.45e-01 82.4% 5.3%
3402677 394.1.1.1 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.57 38.0 4.15e-01 79.7% 86.2%
3717426 2004.1.1.250 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.57 44.0 2.74e-01 82.4% 81.5%
4134015 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.55 45.0 3.65e-01 93.2% 71.6%
3626609 389.1.1.1 ↗ few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.55 30.0 3.78e-01 89.2% 88.9%
3425464 5.1.3.54 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1668 0.55 42.0 2.68e-01 82.4% 28.3%
3244742 2484.1.1.200 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.54 39.0 2.63e-01 75.7% 45.5%
4351646 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.54 39.0 2.92e-01 75.7% 30.3%
3975472 1104.1.1.1 ↗ a+b complex topology › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › DUF927 0.54 45.0 3.52e-01 90.5% 70.3%
3907176 4.1.1.248 ↗ beta barrels › SH3 › SH3 › SH3 › CABIT 0.53 42.0 3.95e-01 90.5% 71.1%
3273955 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.53 45.0 3.63e-01 98.6% 85.2%
4400641 4.1.1.397 ↗ beta barrels › SH3 › SH3 › SH3 › PF29622 0.52 42.0 4.12e-01 87.8% 88.7%
3565241 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 41.0 2.66e-01 90.5% 65.1%
3617894 9.1.1.45 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › FBO_C 0.52 36.0 3.01e-01 77.0% 72.3%
4377781 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.51 40.0 3.97e-01 91.9% 81.2%