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MK241539.2__AZU97324.1__X__00012

Bact-Vir

MK241539.2__AZU97324.1__X__00012

Identity

Accession:
MK241539 ↗
Kingdom:
phage

Quality

83.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Alteromonas_phage_P24

TaxID: 2500137

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-77
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1e2tA02 3.30.1120.150 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.73 42.0 4.09e-01 81.6% 51.2%
8d3lA01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.67 41.0 3.97e-01 100.0% 53.4%
2kcjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 56.0 5.02e-01 97.4% 67.6%
4m8aA00 3.30.720.210 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.64 46.0 4.84e-01 100.0% 86.6%
1qqgA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 51.0 4.73e-01 94.7% 97.1%
4ioyX02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 55.0 4.80e-01 100.0% 80.0%
1wrjA01 3.30.160.70 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Methylated DNA-protein cysteine methyltransferase domain 0.61 33.0 3.49e-01 88.2% 58.2%
1mixA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 48.0 4.61e-01 98.7% 74.2%
4iapA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 51.0 4.84e-01 96.1% 94.6%
4hhvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 51.0 4.64e-01 94.7% 89.3%
7byjA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 50.0 4.72e-01 94.7% 77.9%
2dn6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 50.0 4.44e-01 94.7% 81.7%
1x1fA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 51.0 4.16e-01 97.4% 52.3%
2da0A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 51.0 4.46e-01 94.7% 78.9%
2kigA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.60 51.0 4.07e-01 97.4% 59.6%
4nswA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 50.0 4.48e-01 94.7% 66.1%
3tfmA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 48.0 4.37e-01 96.1% 65.1%
1v5pA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 48.0 4.42e-01 92.1% 78.6%
2rloA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 49.0 4.27e-01 97.4% 89.8%
2kr0A01 2.30.29.70 Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 0.59 48.0 4.36e-01 96.1% 92.0%
1wgqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 50.0 4.49e-01 96.1% 68.8%
1zc3B00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 50.0 4.46e-01 94.7% 89.0%
4gzuA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 49.0 3.97e-01 94.7% 62.0%
3fm8D03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 49.0 4.42e-01 96.1% 75.0%
1v5uA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 48.0 4.28e-01 96.1% 86.3%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 40.0 4.24e-01 80.3% 82.1%
2cofA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 48.0 4.37e-01 96.1% 69.2%
2cocA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 48.0 4.43e-01 94.7% 97.0%
2codA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 45.0 4.24e-01 94.7% 70.8%
7x68A01 2.30.40.10 Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 0.56 34.0 3.93e-01 94.7% 92.0%
3rv0B03 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 39.0 3.88e-01 88.2% 69.6%
1sfeA01 3.30.160.70 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Methylated DNA-protein cysteine methyltransferase domain 0.53 35.0 3.47e-01 88.2% 63.0%
5yrzB00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.53 29.0 3.19e-01 73.7% 65.5%
2o8eA01 3.40.1170.10 Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › DNA repair protein MutS, domain I 0.52 39.0 3.37e-01 80.3% 95.9%
3mixA01 3.40.30.60 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 0.52 36.0 3.12e-01 82.9% 45.8%
3noyB02 3.30.413.10 Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 0.50 35.0 3.30e-01 82.9% 58.9%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3367042 4263.2.1.0 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain 0.73 51.0 5.16e-01 100.0% 74.3%
3967396 4263.2.1.1 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.71 48.0 5.14e-01 100.0% 81.5%
3301183 4263.2.1.0 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain 0.71 50.0 4.97e-01 100.0% 70.0%
4164648 4263.2.1.1 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.69 48.0 5.04e-01 100.0% 80.0%
4545531 220.1.1.255 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_10 0.68 57.0 5.63e-01 100.0% 87.5%
4481690 4263.2.1.1 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.68 51.0 5.28e-01 84.2% 85.7%
3267918 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 44.0 4.95e-01 92.1% 94.5%
4208333 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 59.0 5.07e-01 100.0% 81.7%
4504670 4263.2.1.1 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.65 45.0 4.70e-01 100.0% 78.6%
3734376 220.1.1.33 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_8 0.65 55.0 4.88e-01 94.7% 64.5%
4679015 220.1.1.150 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF986 0.64 48.0 4.75e-01 96.1% 76.2%
4357574 4263.2.1.1 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.64 46.0 4.82e-01 84.2% 82.9%
4534864 4263.2.1.0 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain 0.64 45.0 4.66e-01 100.0% 80.0%
3217950 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 54.0 4.93e-01 97.4% 97.1%
3563663 220.1.1.33 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_8 0.63 54.0 4.94e-01 94.7% 93.0%
3570843 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.63 51.0 4.56e-01 94.7% 62.7%
3890749 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 51.0 4.84e-01 94.7% 76.7%
3840270 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.61 51.0 4.45e-01 94.7% 76.7%
3529782 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.61 52.0 4.56e-01 96.1% 64.3%
3560712 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.61 49.0 4.51e-01 94.7% 66.7%
3789113 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.61 53.0 3.73e-01 100.0% 71.7%
3396717 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.60 50.0 4.62e-01 100.0% 71.6%
3789579 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 50.0 4.47e-01 96.1% 80.0%
3874654 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 51.0 4.11e-01 94.7% 64.7%
3633728 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 51.0 4.47e-01 94.7% 65.2%
3841716 220.1.1.123 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st 0.60 52.0 4.22e-01 100.0% 74.2%
3563672 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 51.0 4.20e-01 94.7% 80.7%
3919585 220.1.1.154 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_EXO84 0.60 51.0 3.94e-01 94.7% 58.2%
3268767 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 50.0 4.44e-01 94.7% 64.5%
4100107 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 50.0 4.46e-01 94.7% 82.7%
3752179 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.59 50.0 4.24e-01 94.7% 86.9%
3940847 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.59 49.0 4.43e-01 94.7% 74.5%
3264236 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.59 48.0 4.42e-01 94.7% 68.0%
3223841 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 51.0 3.94e-01 100.0% 58.9%
3912099 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 50.0 4.56e-01 96.1% 89.5%
4202176 220.1.1.123 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st 0.59 51.0 3.89e-01 100.0% 66.3%
3882657 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 49.0 4.51e-01 96.1% 71.4%
3260972 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 52.0 4.50e-01 100.0% 97.5%
3272546 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 49.0 4.23e-01 94.7% 84.8%
3906424 220.1.1.49 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH 0.59 52.0 4.27e-01 100.0% 72.9%
4065466 220.1.1.150 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF986 0.59 48.0 4.80e-01 93.4% 86.3%
3486006 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 49.0 4.04e-01 94.7% 69.7%
3572708 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.58 49.0 4.31e-01 94.7% 78.3%
3248729 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.58 49.0 4.07e-01 96.1% 55.7%
3499127 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 49.0 4.36e-01 97.4% 66.1%
3474420 220.1.1.123 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st 0.58 49.0 3.99e-01 96.1% 52.7%
3388895 220.1.1.170 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_alsin 0.58 49.0 4.37e-01 94.7% 77.3%
4396276 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 38.0 3.48e-01 90.8% 51.0%
3414272 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.57 49.0 4.55e-01 94.7% 95.8%
3254760 220.1.1.29 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_3 0.57 47.0 4.10e-01 94.7% 71.2%
3270411 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 48.0 4.26e-01 96.1% 80.9%
4025949 220.1.1.92 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Mcp5_PH 0.57 48.0 4.16e-01 97.4% 86.4%
5082200 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.57 40.0 3.53e-01 90.8% 49.6%
3178261 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 47.0 4.10e-01 96.1% 80.0%
3276218 220.1.1.30 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_BEACH 0.56 47.0 4.06e-01 94.7% 98.4%
3249359 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 47.0 4.05e-01 94.7% 61.6%
3815507 4263.2.1.1 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.56 51.0 4.70e-01 100.0% 84.2%
3251345 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 47.0 3.91e-01 96.1% 72.1%
4049829 4263.2.1.1 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.55 51.0 4.70e-01 100.0% 86.3%
3705941 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.54 39.0 3.86e-01 86.8% 72.5%
4612008 2485.1.1.6 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › FHIPEP 0.53 37.0 3.37e-01 88.2% 53.3%
3256547 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 43.0 4.02e-01 96.1% 72.0%
3515688 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 44.0 3.87e-01 98.7% 94.2%
1505086 65.1.1.0 ↗ beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.52 32.0 3.57e-01 94.7% 83.9%
3973145 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.52 35.0 3.91e-01 94.7% 100.0%
4399887 2485.1.1.6 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › FHIPEP 0.51 38.0 3.51e-01 94.7% 61.0%
3391414 394.1.1.1 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.51 34.0 3.72e-01 89.5% 90.0%
4527643 65.1.1.0 ↗ beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.51 34.0 3.95e-01 94.7% 98.2%