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MK241539.2__AZU97333.1__X__00021

Bact-Vir

MK241539.2__AZU97333.1__X__00021

Identity

Accession:
MK241539 ↗
Kingdom:
phage

Quality

90.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-73
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4lhfA00 6.10.200.10 Special › Helix non-globular › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Regulatory phage protein Cox 0.70 50.0 4.89e-01 75.3% 68.4%
6az1a00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 40.0 4.11e-01 72.6% 68.1%
2xigA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 41.0 3.87e-01 71.2% 58.2%
2mh2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 40.0 4.24e-01 71.2% 79.7%
1ku9B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 39.0 3.70e-01 71.2% 56.3%
7jgsG02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 42.0 3.84e-01 75.3% 69.4%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 41.0 4.09e-01 72.6% 72.0%
2v3mA00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.59 37.0 3.40e-01 78.1% 50.0%
3luyA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.58 37.0 3.19e-01 76.7% 42.2%
1yyvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 41.0 3.62e-01 76.7% 53.6%
4iw7A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.57 35.0 3.05e-01 78.1% 39.1%
1cqaA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.57 41.0 3.50e-01 76.7% 74.0%
5mmiU01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.57 38.0 3.65e-01 78.1% 61.0%
1u5tA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 38.0 3.80e-01 71.2% 68.0%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 46.0 4.20e-01 94.5% 75.0%
6kf9G01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 38.0 3.67e-01 71.2% 64.6%
5mmjd02 3.10.290.10 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain 0.55 37.0 3.45e-01 71.2% 90.7%
3hbxA03 3.90.1150.160 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.55 38.0 3.59e-01 78.1% 60.2%
2wbmA03 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 33.0 3.40e-01 76.7% 62.9%
6lw5A01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.54 42.0 2.84e-01 86.3% 64.2%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 46.0 3.82e-01 100.0% 59.6%
4pcqA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.54 35.0 3.43e-01 75.3% 58.3%
1sd4A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 37.0 3.88e-01 71.2% 82.8%
2cyyA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.54 34.0 3.13e-01 75.3% 48.4%
2l48A00 3.30.70.2030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 33.0 3.17e-01 76.7% 52.9%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 36.0 3.51e-01 71.2% 62.4%
3jcmH04 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.53 35.0 3.52e-01 74.0% 62.3%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 44.0 3.96e-01 93.2% 66.7%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 38.0 3.43e-01 78.1% 53.8%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 37.0 3.23e-01 76.7% 45.8%
2ia0B02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.52 34.0 3.08e-01 75.3% 48.5%
5hs7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 44.0 4.06e-01 97.3% 73.5%
7xc2A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 37.0 3.36e-01 78.1% 62.3%
1fvqA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 34.0 3.46e-01 74.0% 68.1%
8amzS01 1.25.40.570 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.51 43.0 2.79e-01 100.0% 20.1%
2anrA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.51 35.0 3.47e-01 76.7% 69.3%
4pg4B03 3.30.70.3100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 33.0 3.29e-01 75.3% 64.0%
5wm1A02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.51 34.0 3.02e-01 76.7% 46.8%
5ck3C00 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.51 36.0 3.24e-01 75.3% 58.1%
2ph7A01 1.10.3400.10 Mainly Alpha › Orthogonal Bundle › af_2093 domain like fold › af_2093 domain like 0.51 35.0 2.95e-01 72.6% 49.2%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 43.0 3.90e-01 100.0% 87.4%
3ezjA02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.50 32.0 3.34e-01 72.6% 69.1%
1p6rA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 36.0 3.55e-01 78.1% 70.7%
2cveA02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 30.0 3.17e-01 76.7% 65.2%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4008376 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.68 48.0 5.15e-01 75.3% 90.0%
4996559 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 45.0 4.50e-01 71.2% 74.7%
4998543 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 51.0 4.43e-01 83.6% 60.9%
5051224 304.128.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB 0.63 37.0 3.81e-01 75.3% 61.4%
3168448 101.1.2.154 alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.61 43.0 3.60e-01 74.0% 47.3%
3617966 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 41.0 4.25e-01 75.3% 77.1%
3573598 101.1.2.154 alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.59 41.0 3.66e-01 75.3% 53.6%
3481408 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 40.0 3.02e-01 72.6% 30.3%
4952986 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.58 36.0 3.72e-01 76.7% 65.7%
5043379 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.58 35.0 3.71e-01 74.0% 67.7%
4043692 310.1.1.2 a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arg_tRNA_synt_N 0.58 40.0 3.43e-01 72.6% 84.2%
4972208 101.1.2.57 alpha arrays › HTH › HTH › winged helix domain › EAP30 0.58 40.0 3.78e-01 72.6% 63.3%
5048498 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 40.0 3.19e-01 72.6% 35.5%
4966152 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.58 35.0 3.52e-01 74.0% 58.7%
5011762 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.57 31.0 3.38e-01 75.3% 60.0%
4953963 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.57 35.0 3.51e-01 75.3% 57.3%
4945151 304.128.1.1 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB › FtsX 0.57 36.0 3.58e-01 74.0% 61.3%
5080144 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.57 34.0 3.49e-01 74.0% 61.4%
4966320 101.1.2.884 alpha arrays › HTH › HTH › winged helix domain › UPF0122 0.57 44.0 3.98e-01 84.9% 78.6%
4958723 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.57 34.0 3.48e-01 74.0% 61.4%
3169812 101.1.2.57 alpha arrays › HTH › HTH › winged helix domain › EAP30 0.57 39.0 3.07e-01 72.6% 32.5%
4972516 304.4.1.1 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.56 36.0 3.49e-01 75.3% 57.5%
2583 101.1.2.231 alpha arrays › HTH › HTH › winged helix domain › Staph_reg_Sar_Rot 0.56 40.0 3.46e-01 75.3% 47.8%
4094061 101.1.9.98 alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF4004 0.56 38.0 3.63e-01 72.6% 60.0%
5029842 101.1.2.645 alpha arrays › HTH › HTH › winged helix domain › HTH_40 0.55 42.0 3.77e-01 82.2% 61.9%
3301434 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.55 35.0 3.41e-01 78.1% 56.5%
3735293 101.1.2.312 alpha arrays › HTH › HTH › winged helix domain › MSC 0.55 41.0 2.83e-01 79.5% 28.1%
3315108 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.55 41.0 3.67e-01 82.2% 61.8%
5061509 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.55 35.0 3.67e-01 78.1% 72.3%
5078176 304.4.1.1 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.55 35.0 3.51e-01 76.7% 62.7%
3334401 101.1.2.566 alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C 0.55 39.0 2.73e-01 78.1% 23.0%
3467284 101.1.2.154 alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.54 39.0 3.52e-01 78.1% 57.4%
4975073 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.54 33.0 3.35e-01 74.0% 61.4%
3930245 101.1.2.407 alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 0.54 40.0 3.58e-01 82.2% 55.5%
None 0.53 39.0 2.36e-01 79.5% 94.5%
3493123 101.1.1.321 alpha arrays › HTH › HTH › Three-helical HTH › PheRS_DBD3 0.52 35.0 3.15e-01 78.1% 48.6%
3471467 101.1.2.169 alpha arrays › HTH › HTH › winged helix domain › PheRS_DBD3 0.52 35.0 3.14e-01 78.1% 48.6%
3786249 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.52 34.0 2.94e-01 82.2% 40.0%
4039359 310.1.1.2 a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arg_tRNA_synt_N 0.52 38.0 3.28e-01 79.5% 84.2%
3965593 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 37.0 3.54e-01 75.3% 65.9%
5082051 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 40.0 3.83e-01 87.7% 84.4%
3858621 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.51 34.0 3.34e-01 82.2% 62.5%
3333353 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.51 33.0 3.28e-01 72.6% 62.7%
4570602 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.51 32.0 3.30e-01 75.3% 65.7%
3951002 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.51 42.0 3.52e-01 94.5% 68.1%
4838702 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.51 35.0 3.26e-01 79.5% 55.2%
3478290 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.51 33.0 3.54e-01 74.0% 75.4%
3916901 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.51 33.0 3.10e-01 74.0% 53.3%
3482558 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.50 36.0 3.41e-01 79.5% 63.5%
5080852 304.128.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB 0.50 36.0 3.47e-01 75.3% 67.1%
4940497 304.128.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB 0.50 36.0 3.26e-01 75.3% 57.0%