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MK241539.2__QIV64686.1__X__00062
Bact-VirMK241539.2__QIV64686.1__X__00062
Identity
- Accession:
- MK241539 ↗
- Kingdom:
- phage
Quality
67.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-53
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qgsB01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.75 | 54.0 | 4.52e-01 | 83.0% | 45.5% |
| 3l1nA01 | 6.10.140.790 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 53.0 | 5.42e-01 | 79.2% | 84.3% |
| 7lv8B01 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.68 | 54.0 | 5.16e-01 | 88.7% | 76.2% |
| 3gzfD00 | 1.10.150.420 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Coronavirus nonstructural protein 4 C-terminus | 0.68 | 43.0 | 3.62e-01 | 75.5% | 37.4% |
| 5b1oA00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.68 | 61.0 | 5.69e-01 | 100.0% | 92.3% |
| 2cr7A01 | 1.20.1160.11 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix | 0.55 | 38.0 | 3.63e-01 | 75.5% | 57.1% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4981781 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.82 | 72.0 | 5.71e-01 | 94.3% | 51.0% |
| 4034151 | 604.39.1.9 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › Vut_1 | 0.80 | 67.0 | 4.38e-01 | 92.5% | 22.8% |
| 3502111 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.79 | 56.0 | 5.72e-01 | 73.6% | 78.0% |
| 4972578 | 109.23.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal domain in vacuolar protein sorting-associated protein 54 › C-terminal domain in vacuolar protein sorting-associated protein 54 | 0.79 | 69.0 | 5.57e-01 | 96.2% | 55.6% |
| 3492370 | 4010.1.1.2 ↗ | a+b complex topology › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 0.79 | 70.0 | 4.31e-01 | 100.0% | 18.0% |
| 5039692 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.78 | 68.0 | 5.55e-01 | 96.2% | 72.6% |
| 4403895 | 2004.1.1.795 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27377 | 0.78 | 71.0 | 4.63e-01 | 98.1% | 41.5% |
| 3656530 | 143.1.1.0 ↗ | alpha arrays › PABP domain-like › PABC(PABP) domain › PABC(PABP) domain | 0.77 | 54.0 | 4.80e-01 | 73.6% | 53.3% |
| 3581944 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.76 | 62.0 | 4.86e-01 | 92.5% | 45.2% |
| 3934455 | 216.1.1.17 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Med15_C | 0.76 | 53.0 | 4.06e-01 | 73.6% | 34.8% |
| 3446538 | 5061.1.1.1 ↗ | alpha complex topology › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › SecY | 0.72 | 60.0 | 3.56e-01 | 98.1% | 11.5% |
| 3789018 | 109.4.1.17 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cullin | 0.70 | 60.0 | 3.54e-01 | 100.0% | 24.5% |
| 4973081 | 148.1.1.4 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF | 0.70 | 56.0 | 5.28e-01 | 90.6% | 75.4% |
| 3574981 | 604.12.1.91 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › RSLD_CPSF6 | 0.68 | 45.0 | 4.12e-01 | 84.9% | 51.4% |
| 4998087 | 3352.1.1.8 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PTPS_related | 0.67 | 58.0 | 3.54e-01 | 100.0% | 28.7% |
| 4976290 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.67 | 54.0 | 4.75e-01 | 90.6% | 60.0% |
| 3324221 | 148.1.1.57 ↗ | alpha arrays › Histone-like › Histone-related › Histone › AAA_lid_3 | 0.65 | 50.0 | 4.65e-01 | 88.7% | 67.1% |
D2
medium
residues 54-118